RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ARCQ7LC44 396 aa27.06■■□□□ 1.92
COL13A1-214ENST00000522165 TEKT4Q8WW24 435 aa27.06■■□□□ 1.92
COL13A1-214ENST00000522165 NCAPGQ9BPX3 1015 aa27.06■■□□□ 1.92
COL13A1-214ENST00000522165 DNAJC17Q9NVM6 304 aaKnown RBP27.06■■□□□ 1.92
COL13A1-214ENST00000522165 PADI3Q9ULW8 664 aa27.06■■□□□ 1.92
COL13A1-214ENST00000522165 DCDC2CA8MYV0 355 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 KIF3CO14782 793 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 ATP2C2O75185 946 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 TTC4O95801 387 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 LCP1P13796 627 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 PTPN9P43378 593 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 MAGOHP61326 146 aaKnown RBP27.05■■□□□ 1.92
COL13A1-214ENST00000522165 SCYL2Q6P3W7 929 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 ZCCHC9Q8N567 271 aaKnown RBP27.05■■□□□ 1.92
COL13A1-214ENST00000522165 GPBP1L1Q9HC44 474 aaPredicted RBP27.05■■□□□ 1.92
COL13A1-214ENST00000522165 XPO1O14980 1071 aaKnown RBP27.05■■□□□ 1.92
COL13A1-214ENST00000522165 EIF3HO15372 352 aaKnown RBP eCLIP27.05■■□□□ 1.92
COL13A1-214ENST00000522165 DESP17661 470 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 PTPN1P18031 435 aaKnown RBP27.05■■□□□ 1.92
COL13A1-214ENST00000522165 CD52P31358 61 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 SKIDA1Q1XH10 827 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 RELL1Q8IUW5 271 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 FUKQ8N0W3 1084 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 PCSK9Q8NBP7 692 aaKnown RBP27.05■■□□□ 1.92
COL13A1-214ENST00000522165 SENP8Q96LD8 212 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 TBCBQ99426 244 aa27.05■■□□□ 1.92
COL13A1-214ENST00000522165 TPX2Q9ULW0 747 aaKnown RBP27.05■■□□□ 1.92
COL13A1-214ENST00000522165 ACSL3O95573 720 aa27.04■■□□□ 1.92
COL13A1-214ENST00000522165 PECAM1P16284 738 aaPredicted RBP27.04■■□□□ 1.92
COL13A1-214ENST00000522165 ACAT1P24752 427 aaKnown RBP27.04■■□□□ 1.92
COL13A1-214ENST00000522165 PDK2Q15119 407 aa27.04■■□□□ 1.92
COL13A1-214ENST00000522165 CCDC142Q17RM4 750 aa27.04■■□□□ 1.92
COL13A1-214ENST00000522165 C6orf118Q5T5N4 469 aa27.04■■□□□ 1.92
COL13A1-214ENST00000522165 C11orf84Q9BUA3 381 aaPredicted RBP27.04■■□□□ 1.92
COL13A1-214ENST00000522165 MAK16Q9BXY0 300 aaKnown RBP27.04■■□□□ 1.92
COL13A1-214ENST00000522165 DUSP16Q9BY84 665 aa27.04■■□□□ 1.92
COL13A1-214ENST00000522165 TLDC2A0PJX2 215 aa27.04■■□□□ 1.92
COL13A1-214ENST00000522165 IFNB1P01574 187 aa27.04■■□□□ 1.92
COL13A1-214ENST00000522165 CLCNKBP51801 687 aa27.04■■□□□ 1.92
COL13A1-214ENST00000522165 HDAC4P56524 1084 aa27.04■■□□□ 1.92
COL13A1-214ENST00000522165 MAP7D3Q8IWC1 876 aa27.04■■□□□ 1.92
COL13A1-214ENST00000522165 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.04■■□□□ 1.92
COL13A1-214ENST00000522165 MGEA5O60502 916 aa27.03■■□□□ 1.92
COL13A1-214ENST00000522165 GHRP10912 638 aa27.03■■□□□ 1.92
COL13A1-214ENST00000522165 MDH1P40925 334 aaKnown RBP27.03■■□□□ 1.92
COL13A1-214ENST00000522165 SCNN1GP51170 649 aa27.03■■□□□ 1.92
COL13A1-214ENST00000522165 PPP2R2AP63151 447 aa27.03■■□□□ 1.92
COL13A1-214ENST00000522165 GUCY1A3Q02108 690 aa27.03■■□□□ 1.92
COL13A1-214ENST00000522165 KRT81Q14533 505 aa27.03■■□□□ 1.92
COL13A1-214ENST00000522165 KYNUQ16719 465 aa27.03■■□□□ 1.92
COL13A1-214ENST00000522165 EPS8L3Q8TE67 593 aaKnown RBP27.03■■□□□ 1.92
COL13A1-214ENST00000522165 CENPIQ92674 756 aaPredicted RBP27.03■■□□□ 1.92
COL13A1-214ENST00000522165 ROPN1BQ9BZX4 212 aaPredicted RBP27.03■■□□□ 1.92
COL13A1-214ENST00000522165 C10orf88Q9H8K7 445 aa27.03■■□□□ 1.92
COL13A1-214ENST00000522165 ROPN1Q9HAT0 212 aaPredicted RBP27.03■■□□□ 1.92
COL13A1-214ENST00000522165 NINJ2Q9NZG7 142 aa27.03■■□□□ 1.92
COL13A1-214ENST00000522165 ZNF623O75123 536 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 TFE3P19532 575 aaPredicted RBP27.02■■□□□ 1.92
COL13A1-214ENST00000522165 TFDP2Q14188 446 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 MORF4L2Q15014 288 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 CEP128Q6ZU80 1094 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 PAQR9Q6ZVX9 377 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 PIGZQ86VD9 579 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 RNF157Q96PX1 679 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 SNRNP25Q9BV90 132 aaKnown RBP27.02■■□□□ 1.92
COL13A1-214ENST00000522165 GPATCH2LQ9NWQ4 482 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 SLC12A6Q9UHW9 1150 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 RASGRF2O14827 1237 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 MDM4O15151 490 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 RAB27AP51159 221 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 GDF10P55107 478 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 EIF3EP60228 445 aaKnown RBP27.02■■□□□ 1.92
COL13A1-214ENST00000522165 PTK7Q13308 1070 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 DSC3Q14574 896 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 ZC3H12AQ5D1E8 599 aaKnown RBP27.02■■□□□ 1.92
COL13A1-214ENST00000522165 RNASEH2BQ5TBB1 312 aaKnown RBP27.02■■□□□ 1.92
COL13A1-214ENST00000522165 KIAA0319Q5VV43 1072 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 TMEM86AQ8N2M4 240 aa27.02■■□□□ 1.92
COL13A1-214ENST00000522165 THSD7BQ9C0I4 1608 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 SMIM23A6NLE4 172 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 CLDN5O00501 218 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 NDC80O14777 642 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 MCF2LO15068 1137 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 RGS16O15492 202 aaPredicted RBP27.01■■□□□ 1.91
COL13A1-214ENST00000522165 NPR3P17342 541 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 IL4RP24394 825 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 SLC8A3P57103 927 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 LPIN1Q14693 890 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 VSIG1Q86XK7 387 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 C3orf58Q8NDZ4 430 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 SPATA18Q8TC71 538 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 RSAD2Q8WXG1 361 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 RBM15Q96T37 977 aaKnown RBP eCLIP27.01■■□□□ 1.91
COL13A1-214ENST00000522165 ADAM33Q9BZ11 813 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 PCDH18Q9HCL0 1135 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 DDX43Q9NXZ2 648 aaKnown RBP27.01■■□□□ 1.91
COL13A1-214ENST00000522165 SRRDQ9UH36 339 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 RPL9P32969 192 aaKnown RBP27.01■■□□□ 1.91
COL13A1-214ENST00000522165 ITGA7Q13683 1181 aa27.01■■□□□ 1.91
COL13A1-214ENST00000522165 MDH1BQ5I0G3 518 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms