RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 TRIM43BA6NCK2 446 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 DCLK1O15075 740 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 SOAT2O75908 522 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 NR2F6P10588 404 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 RPL17P18621 184 aaKnown RBP4.45□□□□□ -1.7
HDAC2-208ENST00000520746 ITGALP20701 1170 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 CERS1P27544 350 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 PIK3CBP42338 1070 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 NPTX2P47972 431 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 NDUFV1P49821 464 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 LILRA4P59901 499 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 RPS16P62249 146 aaKnown RBP4.45□□□□□ -1.7
HDAC2-208ENST00000520746 PROSER3Q2NL68 480 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 SUPT20HL1Q3ZLR7 823 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 RAPGEF4Q8WZA2 1011 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 TRIM43Q96BQ3 446 aaPredicted RBP4.45□□□□□ -1.7
HDAC2-208ENST00000520746 NMD3Q96D46 503 aaKnown RBP4.45□□□□□ -1.7
HDAC2-208ENST00000520746 QTRT1Q9BXR0 403 aaKnown RBP4.45□□□□□ -1.7
HDAC2-208ENST00000520746 MS4A7Q9GZW8 240 aaPredicted RBP4.45□□□□□ -1.7
HDAC2-208ENST00000520746 A1CFQ9NQ94 594 aaKnown RBP4.45□□□□□ -1.7
HDAC2-208ENST00000520746 COL20A1Q9P218 1284 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 MAP3K4Q9Y6R4 1608 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 MAGI3Q5TCQ9 1506 aa4.45□□□□□ -1.7
HDAC2-208ENST00000520746 PPRC1Q5VV67 1664 aaKnown RBP4.45□□□□□ -1.7
HDAC2-208ENST00000520746 A0A0B4J269 797 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 PYCARD-AS1I3L0S3 204 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 KPNA5O15131 536 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 TRIAP1O43715 76 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 ATXN1LP0C7T5 689 aaKnown RBP4.44□□□□□ -1.7
HDAC2-208ENST00000520746 EBLN1P0CF75 366 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 CYP2C9P11712 490 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 XRCC6P12956 609 aaKnown RBP eCLIP4.44□□□□□ -1.7
HDAC2-208ENST00000520746 CCKBRP32239 447 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 VIPR2P41587 438 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 ZNF134P52741 427 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 IFIT5Q13325 482 aaKnown RBP4.44□□□□□ -1.7
HDAC2-208ENST00000520746 TUBB3Q13509 450 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 SYCP2LQ5T4T6 812 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 DCAF12L1Q5VU92 463 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 AWAT2Q6E213 333 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 SLC18B1Q6NT16 456 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 TMEM108Q6UXF1 575 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 C11orf96Q7Z7L8 435 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 MICU3Q86XE3 530 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 OR56A3Q8NH54 315 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 SH2D3AQ9BRG2 576 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 STK31Q9BXU1 1019 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 ADGRE3Q9BY15 652 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 CHST12Q9NRB3 414 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 ZSCAN32Q9NX65 697 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 PAXBP1Q9Y5B6 917 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 SPATA31A3Q5VYP0 1347 aa4.44□□□□□ -1.7
HDAC2-208ENST00000520746 KIF21BO75037 1637 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 UGGT2Q9NYU1 1516 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 MBD3L4A6NDZ8 208 aaPredicted RBP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 MBD3L3A6NE82 208 aaPredicted RBP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 F8W8V4 182 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 FOXN3O00409 490 aaPredicted RBP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 RASSF9O75901 435 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 TOP3BO95985 862 aaKnown RBP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 NHLRC4P0CG21 123 aaPredicted RBP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 SFPQP23246 707 aaKnown RBP eCLIP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 PCSK6P29122 969 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 CD6P30203 668 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 PXNP49023 591 aaPredicted RBP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 PRIM2P49643 509 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 WNT3P56703 355 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 LOXL3P58215 753 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 SATB1Q01826 763 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 KRT17Q04695 432 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 LONRF1Q17RB8 773 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 CEP78Q5JTW2 689 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 RBM20Q5T481 1227 aaKnown RBP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 RUSC1-AS1Q66K80 236 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 SPSB4Q96A44 273 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 REPS1Q96D71 796 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 STRBPQ96SI9 672 aaKnown RBP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 ALG8Q9BVK2 526 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 UNKQ9C0B0 810 aaKnown RBP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 PNPLA8Q9NP80 782 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 ZNF580Q9UK33 172 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 ITGB1BP2Q9UKP3 347 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 PHTF1Q9UMS5 762 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 SHOC2Q9UQ13 582 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 DENND4BO75064 1496 aaPredicted RBP4.43□□□□□ -1.7
HDAC2-208ENST00000520746 ATP10BO94823 1461 aa4.43□□□□□ -1.7
HDAC2-208ENST00000520746 ARAP3Q8WWN8 1544 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 POM121BA6NF01 834 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 TISP43B9A030 160 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 hCG_1984214I3L0E3 225 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 PPP6CO00743 305 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 PPEF2O14830 753 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 IL18RAPO95256 599 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 ONECUT2O95948 504 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 PARP1P09874 1014 aaKnown RBP4.42□□□□□ -1.7
HDAC2-208ENST00000520746 IFIT2P09913 472 aaKnown RBP4.42□□□□□ -1.7
HDAC2-208ENST00000520746 CBSLP0DN79 551 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 CYP2D6P10635 497 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 KLRC1P26715 233 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms