RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CYP2A13Q16696 494 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 GFOD2Q3B7J2 385 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 EMC10Q5UCC4 262 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 PPP4R4Q6NUP7 873 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 MICALCLQ6ZW33 695 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 C14orf80Q86SX3 495 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 FAM90A1Q86YD7 464 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 TCEAL8Q8IYN2 117 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 CFAP52Q8N1V2 620 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 SH2D3CQ8N5H7 860 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 VPS37AQ8NEZ2 397 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 JAKMIP2Q96AA8 810 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 KIF1BPQ96EK5 621 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 BICD1Q96G01 975 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 LRGUKQ96M69 825 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 KLHL32Q96NJ5 620 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 TRIB1Q96RU8 372 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 MPHOSPH6Q99547 160 aaKnown RBP5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 STK31Q9BXU1 1019 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 RTFDC1Q9BY42 306 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 SLC12A5Q9H2X9 1139 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 RETREG1Q9H6L5 497 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 LRIT1Q9P2V4 623 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 SWAP70Q9UH65 585 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 MYO6Q9UM54 1294 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 DEPDC5O75140 1603 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 RNF17Q9BXT8 1623 aaKnown RBP5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 SPATA31A3Q5VYP0 1347 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 ADGRF5Q8IZF2 1346 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 CROCC2H7BZ55 1655 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 AATKQ6ZMQ8 1374 aa5.14□□□□□ -1.59
HMGB3P13-201ENST00000511263 FRMPD1Q5SYB0 1578 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 SETD1BQ9UPS6 1966 aaKnown RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 CCDC151A5D8V7 595 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 SMTNL1A8MU46 457 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 FAM227AF5H4B4 570 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 PRPF3O43395 683 aaKnown RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 PEX1O43933 1283 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 LPXNO60711 386 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 WDHD1O75717 1129 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 KRT38O76015 456 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 THP07101 528 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 ELANEP08246 267 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 EGR2P11161 476 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 ITGALP20701 1170 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 ATICP31939 592 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 NKX6-1P78426 367 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 TP53BP2Q13625 1128 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 DYRK1AQ13627 763 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 DCTN1Q14203 1278 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 KRT72Q14CN4 511 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 KLHL40Q2TBA0 621 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 SLC44A4Q53GD3 710 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 KHDC1LQ5JSQ8 128 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 HECTD2Q5U5R9 776 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 TTC19Q6DKK2 380 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 SFRP4Q6FHJ7 346 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 TAPT1Q6NXT6 567 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 LCA5Q86VQ0 697 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 FAM114A1Q8IWE2 563 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 HSCBQ8IWL3 235 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 MYO1HQ8N1T3 1032 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 GBP7Q8N8V2 638 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 PDPRQ8NCN5 879 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 CCDC47Q96A33 483 aaKnown RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 RSRC1Q96IZ7 334 aaKnown RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 NELL2Q99435 816 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 CGRRF1Q99675 332 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 BAG1Q99933 345 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 ADAM2Q99965 735 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 SLX1AQ9BQ83 275 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 MAK16Q9BXY0 300 aaKnown RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 TEX101Q9BY14 249 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 RSAD1Q9HA92 442 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 EXOC1Q9NV70 894 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 LRRFIP2Q9Y608 721 aaKnown RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 SOS1Q07889 1333 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 MAPK8IP3Q9UPT6 1336 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 BRD4O60885 1362 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 TRPM2O94759 1503 aa5.13□□□□□ -1.59
HMGB3P13-201ENST00000511263 TET3O43151 1660 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 A0A088AWK7 358 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 A0A1W2PPL8 197 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 GOLGA6L9A6NEM1 432 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 LRRC14BA6NHZ5 514 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 PDLIM1O00151 329 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 PRSS23O95084 383 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 ESRRBO95718 433 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 SCGB1D2O95969 90 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 CYP2C9P11712 490 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 LPOP22079 712 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 SLC6A4P31645 630 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 ZNF135P52742 658 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 MRPL12P52815 198 aaKnown RBP5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 NXPH1P58417 271 aa5.12□□□□□ -1.59
HMGB3P13-201ENST00000511263 ITIH3Q06033 890 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms