RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 PTPRCP08575 1304 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 ABCC2Q92887 1545 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 A0A0B4J269 797 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 TARM1B6A8C7 271 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 SMIM22K7EJ46 135 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 PLIN1O60240 522 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 CAND2O75155 1236 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 RPS6KA5O75582 802 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 SMC2O95347 1197 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 ARIH2O95376 493 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 SLU7O95391 586 aaKnown RBP4.53□□□□□ -1.68
CMSS1-204ENST00000479555 JUPP14923 745 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 RDXP35241 583 aaKnown RBP4.53□□□□□ -1.68
CMSS1-204ENST00000479555 NXPH1P58417 271 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 CDC42EP1Q00587 391 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 ICA1Q05084 483 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 TUBB3Q13509 450 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 CCDC183Q5T5S1 534 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 CCDC30Q5VVM6 783 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 SUMO4Q6EEV6 95 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 CATIPQ7Z7H3 387 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 NEK8Q86SG6 692 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 CCDC50Q8IVM0 306 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 GRAMD1CQ8IYS0 662 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 PRR18Q8N4B5 295 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 CCDC191Q8NCU4 936 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 KAT5Q92993 513 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 SPRTNQ9H040 489 aaPredicted RBP4.53□□□□□ -1.68
CMSS1-204ENST00000479555 BHMT2Q9H2M3 363 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 SLC12A5Q9H2X9 1139 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 LMBRD1Q9NUN5 540 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.53□□□□□ -1.68
CMSS1-204ENST00000479555 SHROOM2Q13796 1616 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 PLEKHG2Q9H7P9 1386 aa4.53□□□□□ -1.69
CMSS1-204ENST00000479555 ABCA10Q8WWZ4 1543 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 CCDC141Q6ZP82 1450 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 MBD5Q9P267 1494 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 A0A087WUV0 522 aaPredicted RBP4.52□□□□□ -1.69
CMSS1-204ENST00000479555 A0A1B0GUA9 196 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 ERICH4A6NGS2 130 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 VSTM5A8MXK1 200 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 TISP43B9A030 160 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 F5H697 171 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 GCOM1H8Y6P7 765 aaPredicted RBP4.52□□□□□ -1.69
CMSS1-204ENST00000479555 KRT18P05783 430 aaKnown RBP4.52□□□□□ -1.69
CMSS1-204ENST00000479555 SFPQP23246 707 aaKnown RBP eCLIP4.52□□□□□ -1.69
CMSS1-204ENST00000479555 EDNRBP24530 442 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 PTGER1P34995 402 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 ACTN2P35609 894 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 TUBA4AP68366 448 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 FHL1Q13642 323 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 HLXQ14774 488 aaPredicted RBP4.52□□□□□ -1.69
CMSS1-204ENST00000479555 RAB39AQ14964 217 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 PROSER3Q2NL68 480 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 C3orf36Q3SXR2 165 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 CCDC157Q569K6 752 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 BMP2KLQ5H9B9 411 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 AP1ARQ63HQ0 302 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 CCSAPQ6IQ19 270 aaPredicted RBP4.52□□□□□ -1.69
CMSS1-204ENST00000479555 KRBA2Q6ZNG9 492 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 TECPR1Q7Z6L1 1165 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 ANKRD18AQ8IVF6 992 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 IL17RDQ8NFM7 739 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 DIS3LQ8TF46 1054 aaKnown RBP4.52□□□□□ -1.69
CMSS1-204ENST00000479555 TCP11Q8WWU5 503 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 FKBP10Q96AY3 582 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 SH3GL3Q99963 347 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 TEX13AQ9BXU3 409 aaPredicted RBP4.52□□□□□ -1.69
CMSS1-204ENST00000479555 ACTRT3Q9BYD9 372 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 FAM204AQ9H8W3 233 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 OBP2AQ9NY56 170 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 ANAPC4Q9UJX5 808 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 DDX19BQ9UMR2 479 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 RRP15Q9Y3B9 282 aaKnown RBP4.52□□□□□ -1.69
CMSS1-204ENST00000479555 NEU2Q9Y3R4 380 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 LRRFIP2Q9Y608 721 aaKnown RBP4.52□□□□□ -1.69
CMSS1-204ENST00000479555 PIK3C2GO75747 1445 aa4.52□□□□□ -1.69
CMSS1-204ENST00000479555 LAMC1P11047 1609 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 SYCE3A1L190 88 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 H3BML4 177 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 POLRMTO00411 1230 aaKnown RBP4.51□□□□□ -1.69
CMSS1-204ENST00000479555 PRPF3O43395 683 aaKnown RBP4.51□□□□□ -1.69
CMSS1-204ENST00000479555 KCNAB3O43448 404 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 EPB41L2O43491 1005 aaKnown RBP4.51□□□□□ -1.69
CMSS1-204ENST00000479555 ADCY5O95622 1261 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 CCDC192P0DO97 292 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 TNNT1P13805 278 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 ZFXP17010 805 aaPredicted RBP4.51□□□□□ -1.69
CMSS1-204ENST00000479555 NDUFV1P49821 464 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 TBX4P57082 545 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 PSMC1P62191 440 aaKnown RBP4.51□□□□□ -1.69
CMSS1-204ENST00000479555 PIGFQ07326 219 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 TRAF1Q13077 416 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 NEDD9Q14511 834 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 ZNF267Q14586 743 aaPredicted RBP4.51□□□□□ -1.69
CMSS1-204ENST00000479555 CRYMQ14894 314 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 SLMAPQ14BN4 828 aa4.51□□□□□ -1.69
CMSS1-204ENST00000479555 RBBP5Q15291 538 aaKnown RBP4.51□□□□□ -1.69
CMSS1-204ENST00000479555 PTPN14Q15678 1187 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms