RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 STRA6Q9BX79 667 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 SENP6Q9GZR1 1112 aaPredicted RBP8.27□□□□□ -1.08
TPM3-215ENST00000469717 RBM38Q9H0Z9 239 aaKnown RBP8.27□□□□□ -1.08
TPM3-215ENST00000469717 CROCCQ5TZA2 2017 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 ATP9BO43861 1147 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 RPL10P27635 214 aaKnown RBP8.27□□□□□ -1.09
TPM3-215ENST00000469717 YWHAGP61981 247 aaKnown RBP eCLIP8.27□□□□□ -1.09
TPM3-215ENST00000469717 MYBPC1Q00872 1141 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 C6orf52Q5T4I8 152 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 MON1BQ7L1V2 547 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 GALNT4Q8N4A0 578 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 CFAP36Q96G28 342 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 ZNF512Q96ME7 567 aaPredicted RBP8.27□□□□□ -1.09
TPM3-215ENST00000469717 ZNF778Q96MU6 729 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 DHRS4Q9BTZ2 278 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 RAB20Q9NX57 234 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 H3BNX3 289 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 CD48P09326 243 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 EIF4BP23588 611 aaKnown RBP8.27□□□□□ -1.09
TPM3-215ENST00000469717 VCPP55072 806 aaKnown RBP8.27□□□□□ -1.09
TPM3-215ENST00000469717 FAXCQ5TGI0 409 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 C16orf46Q6P387 395 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 HAUS6Q7Z4H7 955 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 SLC9A9Q8IVB4 645 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 UNC45BQ8IWX7 931 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 KATNAL2Q8IYT4 538 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 DEFB107AQ8IZN7 70 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.27□□□□□ -1.09
TPM3-215ENST00000469717 ACTL9Q8TC94 416 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 C17orf50Q8WW18 174 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 SIKE1Q9BRV8 207 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 SOX13Q9UN79 622 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 POMPQ9Y244 141 aa8.27□□□□□ -1.09
TPM3-215ENST00000469717 FARP1Q9Y4F1 1045 aaPredicted RBP8.27□□□□□ -1.09
TPM3-215ENST00000469717 SMIM31A0A1B0GVY4 71 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 COPEO14579 308 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 ATP2A1O14983 1001 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 TBX3O15119 743 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 DNAJA2O60884 412 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 ITGBL1O95965 494 aaPredicted RBP8.26□□□□□ -1.09
TPM3-215ENST00000469717 PDGFRBP09619 1106 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 RPL22P35268 128 aaKnown RBP8.26□□□□□ -1.09
TPM3-215ENST00000469717 FDFT1P37268 417 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 FBXO11Q86XK2 927 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 FAM71DQ8N9W8 422 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 ACSS2Q9NR19 701 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 ZDHHC7Q9NXF8 308 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 SLC17A6Q9P2U8 582 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 XPO7Q9UIA9 1087 aaKnown RBP8.26□□□□□ -1.09
TPM3-215ENST00000469717 ZNF536O15090 1300 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 PIK3R2O00459 728 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 ADCY3O60266 1144 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 DKC1O60832 514 aaKnown RBP eCLIP8.26□□□□□ -1.09
TPM3-215ENST00000469717 TGDSO95455 350 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 INHBAP08476 426 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 CCDC166P0CW27 439 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 COL6A2P12110 1019 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 OTUD4Q01804 1114 aaKnown RBP8.26□□□□□ -1.09
TPM3-215ENST00000469717 AP3B2Q13367 1082 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 SNAPC2Q13487 334 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 KRT39Q6A163 491 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 TATDN1Q6P1N9 297 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 SPOCD1Q6ZMY3 1216 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 CHSY1Q86X52 802 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 SIAH1Q8IUQ4 282 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 EXD1Q8NHP7 514 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.26□□□□□ -1.09
TPM3-215ENST00000469717 E2F7Q96AV8 911 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 DCUN1D1Q96GG9 259 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 CATSPER2Q96P56 530 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 MCEEQ96PE7 176 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 AMNQ9BXJ7 453 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 CDH22Q9UJ99 828 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 SBF2Q86WG5 1849 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 I3L4J1 428 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 RPL5P46777 297 aaKnown RBP8.26□□□□□ -1.09
TPM3-215ENST00000469717 CDKL1Q00532 357 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 CYTH1Q15438 398 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 CIAPIN1Q6FI81 312 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 KLC3Q6P597 504 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 STXBP4Q6ZWJ1 553 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 PHTF2Q8N3S3 785 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 ICA1LQ8NDH6 482 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 FBXL13Q8NEE6 735 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 MAN1C1Q9NR34 630 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 KCNK4Q9NYG8 393 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 BTBD7Q9P203 1132 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 SHOC2Q9UQ13 582 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 HBS1LQ9Y450 684 aaKnown RBP8.26□□□□□ -1.09
TPM3-215ENST00000469717 DTNAQ9Y4J8 743 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 IKBKGQ9Y6K9 419 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 PSTPIP1O43586 416 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 TOM1L1O75674 476 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 PRELPP51888 382 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 DNAL1Q4LDG9 190 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 TEX44Q53QW1 395 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 MOXD1Q6UVY6 613 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 FRMD7Q6ZUT3 714 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 SULF1Q8IWU6 871 aa8.26□□□□□ -1.09
TPM3-215ENST00000469717 NAT8LQ8N9F0 302 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms