RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	TTC16	Q8NEE8	873 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	JAKMIP2	Q96AA8	810 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	RMDN1	Q96DB5	314 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	NT5C1B	Q96P26	610 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	ANO10	Q9NW15	660 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	DLL3	Q9NYJ7	618 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	NCDN	Q9UBB6	729 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	EML5	Q05BV3	1969 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	TRAV19	A0A0A6YYK7	116 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	TRIM66	O15016	1216 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	OLFM2	O95897	454 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	USP17L7	P0C7H9	530 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	PTMS	P20962	102 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	TGM1	P22735	817 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	ERCC5	P28715	1186 aa	Predicted RBP	13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	YWHAE	P62258	255 aa	Known RBP	13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	MTF1	Q14872	753 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	FSTL4	Q6MZW2	842 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	TRIM59	Q8IWR1	403 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	PPM1K	Q8N3J5	372 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	KIAA1958	Q8N8K9	716 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	TTC8	Q8TAM2	541 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	TATDN2	Q93075	761 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	C8orf48	Q96LL4	319 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	SLC22A12	Q96S37	553 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	ARID3A	Q99856	593 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	HINFP	Q9BQA5	517 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	NT5C1A	Q9BXI3	368 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	ZNF518B	Q9C0D4	1074 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	ELOVL4	Q9GZR5	314 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	CYP3A43	Q9HB55	503 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	KRT82	Q9NSB4	513 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	C2orf42	Q9NWW7	574 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	TMEM63C	Q9P1W3	806 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	ARHGAP26	Q9UNA1	814 aa		13.47	□□□□□ -0.25
FDPS-204	ENST00000461507	FRYL	O94915	3013 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507		F8VP50	259 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	AP1G2	O75843	785 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	CKM	P06732	381 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	ARSA	P15289	507 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	CNR2	P34972	360 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	PDE6C	P51160	858 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	CUL2	Q13617	745 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	TRIM68	Q6AZZ1	485 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	LAIR1	Q6GTX8	287 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	DENND5B	Q6ZUT9	1274 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	FAM35A	Q86V20	835 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	LONP2	Q86WA8	852 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	SLC2A14	Q8TDB8	520 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	OSCP1	Q8WVF1	389 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	SECISBP2L	Q93073	1101 aa	Known RBP	13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	HEXIM2	Q96MH2	286 aa	Known RBP	13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	B3GNT5	Q9BYG0	378 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	EBF3	Q9H4W6	596 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	THAP9	Q9H5L6	903 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	TRPC7	Q9HCX4	862 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	CISH	Q9NSE2	258 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	EHD2	Q9NZN4	543 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	NFE2L3	Q9Y4A8	694 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	DNAH14	Q0VDD8	3507 aa		13.46	□□□□□ -0.25
FDPS-204	ENST00000461507	NCOR2	Q9Y618	2525 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	CCDC163	A0A0D9SF12	145 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	C2orf78	A6NCI8	922 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	CHURC1-FNTB	B4DL54	471 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	KCNJ18	B7U540	433 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	ABL1	P00519	1130 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	TPM2	P07951	284 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	CD19	P15391	556 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	TBXAS1	P24557	533 aa	Predicted RBP	13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	USP46	P62068	366 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	AMPD2	Q01433	879 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	TYRO3	Q06418	890 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	DMWD	Q09019	674 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	KCNJ12	Q14500	433 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	EML3	Q32P44	896 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	RRAGA	Q7L523	313 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	UNC93A	Q86WB7	457 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	CPA6	Q8N4T0	437 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	C12orf29	Q8N999	325 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	SMARCD1	Q96GM5	515 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	MED15	Q96RN5	788 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	TWNK	Q96RR1	684 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	CRACR2A	Q9BSW2	395 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	INTS2	Q9H0H0	1204 aa	Known RBP	13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	TMEM30A	Q9NV96	361 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	GMEB2	Q9UKD1	530 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	PCDHB4	Q9Y5E5	795 aa		13.45	□□□□□ -0.26
FDPS-204	ENST00000461507	ZNF840P	A6NDX5	716 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	P4HA2	O15460	535 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	LRP3	O75074	770 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	CILP	O75339	1184 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	FAM200B	P0CF97	657 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	DRD1	P21728	446 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	GJA4	P35212	333 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	PPP3CC	P48454	512 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	FNTB	P49356	437 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	CACNA2D1	P54289	1103 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms