RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ARID1BQ8NFD5 2236 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 CENPVL1A0A0U1RR11 272 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 UNC119BA6NIH7 251 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 LGALS16A8MUM7 142 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 NPC1O15118 1278 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 C1SP09871 688 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 MSNP26038 577 aaKnown RBP5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 SLC5A2P31639 672 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 SERPINF1P36955 418 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 BCAT1P54687 386 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 TP53BP2Q13625 1128 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 CCNIQ14094 377 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 TMEM95Q3KNT9 176 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 RAP1GAP2Q684P5 730 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 CENPQQ7L2Z9 268 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 ARHGEF19Q8IW93 802 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 MYCT1Q8N699 235 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 ATG16L2Q8NAA4 619 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 B3GALNT2Q8NCR0 500 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 MYRIPQ8NFW9 859 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 SLC30A5Q8TAD4 765 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 FAM71BQ8TC56 605 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 SSH3Q8TE77 659 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 TMEM171Q8WVE6 324 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 PPM1EQ8WY54 764 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 HAS1Q92839 578 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 PTCD3Q96EY7 689 aaKnown RBP5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 ZDHHC12Q96GR4 267 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 MYLK2Q9H1R3 596 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 SLC25A32Q9H2D1 315 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 IGSF9Q9P2J2 1179 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 DNAJB11Q9UBS4 358 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 CA14Q9ULX7 337 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 SHROOM2Q13796 1616 aa5.12□□□□□ -1.59
HMGB1P16-201ENST00000447155 AQP12BA6NM10 295 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 PIP5K1BO14986 540 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 CCNT2O60583 730 aaKnown RBP5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 TLR5O60602 858 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 LPXNO60711 386 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 GLP2RO95838 553 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 ITGA5P08648 1049 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 PPP3CBP16298 524 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 MST1P26927 711 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 EPHA3P29320 983 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 PGDP52209 483 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 NXPH1P58417 271 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 ITIH3Q06033 890 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 NSUN2Q08J23 767 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 SCAPQ12770 1279 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 FOXO1Q12778 655 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 RAPGEF1Q13905 1077 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 TMTC4Q5T4D3 741 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 RHOUQ7L0Q8 258 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 GPR149Q86SP6 731 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 ABRAQ8N0Z2 381 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 LNX2Q8N448 690 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 OSCP1Q8WVF1 389 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 TRAPPC12Q8WVT3 735 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 ATG4AQ8WYN0 398 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 SCLT1Q96NL6 688 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 ISCA1Q9BUE6 129 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 NRDE2Q9H7Z3 1164 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 RRAGDQ9NQL2 400 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 DACT1Q9NYF0 836 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 LRFN1Q9P244 771 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 VPS51Q9UID3 782 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 KIF15Q9NS87 1388 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 CASKIN1Q8WXD9 1431 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 TEX14Q8IWB6 1497 aa5.11□□□□□ -1.59
HMGB1P16-201ENST00000447155 C1QTNF3-AMACRE9PGA6 284 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 ACKR2O00590 384 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 PPM1DO15297 605 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 PROM1O43490 865 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 HGFP14210 728 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 PECAM1P16284 738 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 NPPBP16860 134 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 ADORA2AP29274 412 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 UQCRC1P31930 480 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 HNRNPMP52272 730 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 TIAL1Q01085 375 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 TUBA3CQ13748 450 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 SF3B3Q15393 1217 aaKnown RBP5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 ARHGAP15Q53QZ3 475 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 HSP90AB4PQ58FF6 505 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 TEDDM1Q5T9Z0 273 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 DEPDC1Q5TB30 811 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 ABHD17BQ5VST6 288 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 VWA1Q6PCB0 445 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 TUBA3EQ6PEY2 450 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 DTX2Q86UW9 622 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 GATAD2AQ86YP4 633 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 IZUMO1Q8IYV9 350 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 CPXCR1Q8N123 301 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 ATRIPQ8WXE1 791 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 LPIN2Q92539 896 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 EID2BQ96D98 161 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 HIST1H2AAQ96QV6 131 aa5.1□□□□□ -1.59
HMGB1P16-201ENST00000447155 PRPF18Q99633 342 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms