RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W YOR314WQ12506 109 aa-0.08□□□□□ -2.42
SEC8YPR055W YBR230W-AQ3E762 66 aa-0.08□□□□□ -2.42
SEC8YPR055W YCR101CP25607 182 aa-0.08□□□□□ -2.42
SEC8YPR055W MRP17P28778 131 aa-0.08□□□□□ -2.42
SEC8YPR055W EMP24P32803 203 aaKnown RBP-0.08□□□□□ -2.42
SEC8YPR055W YBL044WP38194 122 aa-0.08□□□□□ -2.42
SEC8YPR055W SOM1Q05676 74 aa-0.08□□□□□ -2.42
SEC8YPR055W PRM3Q08931 133 aa-0.08□□□□□ -2.42
SEC8YPR055W OST5Q92316 86 aa-0.08□□□□□ -2.42
SEC8YPR055W ECM12O13529 151 aa-0.08□□□□□ -2.42
SEC8YPR055W ATP5P09457 212 aa-0.08□□□□□ -2.42
SEC8YPR055W YHR138CP38841 114 aaPredicted RBP-0.08□□□□□ -2.42
SEC8YPR055W VMA7P39111 118 aa-0.08□□□□□ -2.42
SEC8YPR055W EFM5P53200 248 aaKnown RBP-0.08□□□□□ -2.42
SEC8YPR055W YGR039WP53225 103 aa-0.08□□□□□ -2.42
SEC8YPR055W SEN15Q04675 128 aa-0.08□□□□□ -2.42
SEC8YPR055W YPD1Q07688 167 aa-0.08□□□□□ -2.42
SEC8YPR055W ATG10Q07879 167 aa-0.08□□□□□ -2.42
SEC8YPR055W YPR202WQ08993 238 aa-0.08□□□□□ -2.42
SEC8YPR055W YKL018C-AQ3E7A7 99 aa-0.08□□□□□ -2.42
SEC8YPR055W YLR365WQ7LIF2 110 aa-0.08□□□□□ -2.42
SEC8YPR055W QCR6P00127 147 aa-0.09□□□□□ -2.42
SEC8YPR055W EMC5P40540 141 aa-0.09□□□□□ -2.42
SEC8YPR055W YLR194CQ05777 254 aa-0.09□□□□□ -2.42
SEC8YPR055W FCF2Q12035 217 aaPredicted RBP-0.09□□□□□ -2.42
SEC8YPR055W RPL36BO14455 100 aaKnown RBP-0.09□□□□□ -2.42
SEC8YPR055W RPL33AP05744 107 aaKnown RBP-0.09□□□□□ -2.42
SEC8YPR055W RPL36AP05745 100 aaPredicted RBP-0.09□□□□□ -2.42
SEC8YPR055W PHO13P19881 312 aa-0.09□□□□□ -2.42
SEC8YPR055W BUD23P25627 275 aaPredicted RBP-0.09□□□□□ -2.42
SEC8YPR055W ATG8P38182 117 aaRIP-Chip data-0.09□□□□□ -2.42not detected
SEC8YPR055W MPC2P38857 129 aa-0.09□□□□□ -2.42
SEC8YPR055W GCV3P39726 170 aaPredicted RBP-0.09□□□□□ -2.42
SEC8YPR055W YEA6P39953 335 aa-0.09□□□□□ -2.42
SEC8YPR055W YER137CP40083 148 aaKnown RBP-0.09□□□□□ -2.42
SEC8YPR055W PHS1P40857 217 aa-0.09□□□□□ -2.42
SEC8YPR055W MRX7P53869 86 aa-0.09□□□□□ -2.42
SEC8YPR055W RPL22BP56628 122 aaKnown RBP-0.09□□□□□ -2.42
SEC8YPR055W IRC19Q07843 230 aa-0.09□□□□□ -2.42
SEC8YPR055W FYV7Q12247 151 aa-0.09□□□□□ -2.42
SEC8YPR055W YGL041C-BQ3E750 60 aa-0.09□□□□□ -2.42
SEC8YPR055W YGR240C-AQ3E786 66 aa-0.09□□□□□ -2.42
SEC8YPR055W COX7P10174 60 aa-0.1□□□□□ -2.42
SEC8YPR055W FYV5P25585 152 aa-0.1□□□□□ -2.42
SEC8YPR055W RGI1P40043 161 aaPredicted RBP-0.1□□□□□ -2.42
SEC8YPR055W YIL163CP40448 117 aa-0.1□□□□□ -2.42
SEC8YPR055W YJL218WP40892 196 aaKnown RBP-0.1□□□□□ -2.42
SEC8YPR055W APS2Q00381 147 aa-0.1□□□□□ -2.42
SEC8YPR055W LCL1Q02786 101 aa-0.1□□□□□ -2.42
SEC8YPR055W YOR034C-AQ3E735 80 aa-0.1□□□□□ -2.42
SEC8YPR055W YDR246W-AQ3E763 66 aa-0.1□□□□□ -2.42
SEC8YPR055W YGR121W-AQ3E816 71 aa-0.1□□□□□ -2.42
SEC8YPR055W COA2Q3E823 68 aa-0.1□□□□□ -2.42
SEC8YPR055W YER121WP40076 114 aa-0.1□□□□□ -2.43
SEC8YPR055W LSM8P47093 109 aaKnown RBP-0.1□□□□□ -2.43
SEC8YPR055W YJR128WP47162 119 aa-0.1□□□□□ -2.43
SEC8YPR055W YMR122W-AQ3E842 84 aa-0.1□□□□□ -2.43
SEC8YPR055W UBI4P0CG63 381 aaKnown RBP-0.1□□□□□ -2.43
SEC8YPR055W IMP2P46972 177 aa-0.1□□□□□ -2.43
SEC8YPR055W COF1Q03048 143 aaKnown RBP-0.1□□□□□ -2.43
SEC8YPR055W YMR122CQ03879 124 aa-0.1□□□□□ -2.43
SEC8YPR055W ATP17Q06405 101 aa-0.1□□□□□ -2.43
SEC8YPR055W LDB18Q07887 179 aa-0.1□□□□□ -2.43
SEC8YPR055W YGR035W-AQ45U48 73 aa-0.1□□□□□ -2.43
SEC8YPR055W ENV10Q99382 181 aa-0.1□□□□□ -2.43
SEC8YPR055W YPR010C-AA5Z2X5 72 aa-0.11□□□□□ -2.43
SEC8YPR055W YGL014C-AP0C5N1 53 aa-0.11□□□□□ -2.43
SEC8YPR055W BLM10P43583 2143 aa-0.11□□□□□ -2.43
SEC8YPR055W MRPS12P53732 153 aa-0.11□□□□□ -2.43
SEC8YPR055W CNL1Q06333 122 aa-0.11□□□□□ -2.43
SEC8YPR055W YIL046W-AQ3E7Z4 54 aa-0.11□□□□□ -2.43
SEC8YPR055W EGD2P38879 174 aaKnown RBP-0.11□□□□□ -2.43
SEC8YPR055W YPL038W-AQ3E7B4 63 aa-0.11□□□□□ -2.43
SEC8YPR055W SCS22Q6Q595 175 aa-0.11□□□□□ -2.43
SEC8YPR055W YNL190WP53872 204 aa-0.12□□□□□ -2.43
SEC8YPR055W ELC1Q03071 99 aa-0.12□□□□□ -2.43
SEC8YPR055W FRQ1Q06389 190 aa-0.12□□□□□ -2.43
SEC8YPR055W YDL022C-AP0C5L6 82 aa-0.12□□□□□ -2.43
SEC8YPR055W YHR073W-AP0C5N7 58 aa-0.12□□□□□ -2.43
SEC8YPR055W SHU1P38751 150 aa-0.12□□□□□ -2.43
SEC8YPR055W SFT1P43682 97 aa-0.12□□□□□ -2.43
SEC8YPR055W RPL38P49167 78 aaKnown RBP-0.12□□□□□ -2.43
SEC8YPR055W SAE3P89114 91 aa-0.12□□□□□ -2.43
SEC8YPR055W YER039C-AP0CD97 72 aa-0.12□□□□□ -2.43
SEC8YPR055W YBR013CP38215 129 aa-0.12□□□□□ -2.43
SEC8YPR055W TOS6P48560 102 aa-0.12□□□□□ -2.43
SEC8YPR055W RPS12P48589 143 aaKnown RBP-0.12□□□□□ -2.43
SEC8YPR055W COA4Q05809 96 aa-0.12□□□□□ -2.43
SEC8YPR055W YDR381C-AQ3E6R5 114 aa-0.12□□□□□ -2.43
SEC8YPR055W KSH1Q8TGJ3 72 aa-0.12□□□□□ -2.43
SEC8YPR055W MED11Q99278 115 aa-0.12□□□□□ -2.43
SEC8YPR055W YHR214C-DP0CX93 97 aa-0.13□□□□□ -2.43
SEC8YPR055W FPR2P32472 135 aa-0.13□□□□□ -2.43
SEC8YPR055W YDR042CQ03205 200 aa-0.13□□□□□ -2.43
SEC8YPR055W HUG1Q6Q5K6 68 aa-0.13□□□□□ -2.43
SEC8YPR055W RPL29P05747 59 aaPredicted RBP-0.13□□□□□ -2.43
SEC8YPR055W RPL22AP05749 121 aaKnown RBP-0.13□□□□□ -2.43
SEC8YPR055W YCR085WP25650 117 aa-0.13□□□□□ -2.43
SEC8YPR055W PAU23Q07987 124 aa-0.13□□□□□ -2.43
SEC8YPR055W PAU17Q12370 124 aa-0.13□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms