RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W YDR119W-AQ2V2P9 66 aa4.05□□□□□ -1.76
PDH1YPR002W SPO24Q3E752 67 aa4.05□□□□□ -1.76
PDH1YPR002W YCL021W-AQ96VH3 125 aa4.05□□□□□ -1.76
PDH1YPR002W Q0297Q9ZZV8 51 aa4.05□□□□□ -1.76
PDH1YPR002W TEL1P38110 2787 aa4.04□□□□□ -1.76
PDH1YPR002W YOR304C-AO14468 76 aa4.04□□□□□ -1.76
PDH1YPR002W YBR219CP38317 127 aa4.03□□□□□ -1.76
PDH1YPR002W SVP26P38869 228 aa4.03□□□□□ -1.76
PDH1YPR002W HUR1P45820 110 aa4.03□□□□□ -1.76
PDH1YPR002W MRPL24P36525 258 aaPredicted RBP4.02□□□□□ -1.77
PDH1YPR002W COX14P39103 70 aa4.02□□□□□ -1.77
PDH1YPR002W YMR295CQ03559 197 aa4.02□□□□□ -1.77
PDH1YPR002W YHR139C-AO13536 103 aa4.02□□□□□ -1.77
PDH1YPR002W PBI2P0CT04 75 aaKnown RBP4.02□□□□□ -1.77
PDH1YPR002W TOA2P32774 122 aa4.02□□□□□ -1.77
PDH1YPR002W KRE9P39005 276 aa4.02□□□□□ -1.77
PDH1YPR002W YIL059CP40520 121 aa4.02□□□□□ -1.77
PDH1YPR002W CWP2P43497 92 aa4.02□□□□□ -1.77
PDH1YPR002W SRL1Q08673 210 aa4.02□□□□□ -1.77
PDH1YPR002W RPL2AP0CX45 254 aaKnown RBP4.01□□□□□ -1.77
PDH1YPR002W RPL2BP0CX46 254 aaKnown RBP4.01□□□□□ -1.77
PDH1YPR002W RPS11AP0CX47 156 aaKnown RBP4.01□□□□□ -1.77
PDH1YPR002W RPS11BP0CX48 156 aaKnown RBP4.01□□□□□ -1.77
PDH1YPR002W YAR029WP39549 74 aa4.01□□□□□ -1.77
PDH1YPR002W ARC15P40518 154 aaRIP-Chip data4.01□□□□□ -1.77not detected
PDH1YPR002W RPR2P40571 144 aa4.01□□□□□ -1.77
PDH1YPR002W PMP3P87284 55 aa4.01□□□□□ -1.77
PDH1YPR002W ENV10Q99382 181 aa4.01□□□□□ -1.77
PDH1YPR002W YLR236CA0A023PZG4 107 aa4□□□□□ -1.77
PDH1YPR002W YCR041WP37265 110 aa4□□□□□ -1.77
PDH1YPR002W YPS5P53057 165 aa4□□□□□ -1.77
PDH1YPR002W PPT2Q12036 173 aa4□□□□□ -1.77
PDH1YPR002W YIR021W-AQ3E739 70 aa4□□□□□ -1.77
PDH1YPR002W SMP1P38128 452 aa3.99□□□□□ -1.77
PDH1YPR002W PBA1Q05778 276 aa3.99□□□□□ -1.77
PDH1YPR002W YOR034C-AQ3E735 80 aa3.99□□□□□ -1.77
PDH1YPR002W YBL112CQ3E7Y4 105 aa3.99□□□□□ -1.77
PDH1YPR002W YOR020W-AQ3E824 90 aa3.99□□□□□ -1.77
PDH1YPR002W YER145C-AA0A023PYF4 145 aa3.98□□□□□ -1.77
PDH1YPR002W MPC2P38857 129 aa3.98□□□□□ -1.77
PDH1YPR002W YDL186WP48568 277 aa3.98□□□□□ -1.77
PDH1YPR002W ALG13P53178 202 aa3.98□□□□□ -1.77
PDH1YPR002W VAM10Q08474 114 aa3.98□□□□□ -1.77
PDH1YPR002W SHH4Q06236 168 aa3.97□□□□□ -1.77
PDH1YPR002W YHL042WP38729 150 aa3.97□□□□□ -1.77
PDH1YPR002W YLL006W-AQ3E814 58 aa3.97□□□□□ -1.77
PDH1YPR002W YMR122W-AQ3E842 84 aa3.97□□□□□ -1.77
PDH1YPR002W YGR039WP53225 103 aa3.96□□□□□ -1.78
PDH1YPR002W HAL1Q01766 294 aa3.96□□□□□ -1.78
PDH1YPR002W YPL038W-AQ3E7B4 63 aa3.96□□□□□ -1.78
PDH1YPR002W YAL065CO13511 128 aa3.95□□□□□ -1.78
PDH1YPR002W GAT4P40569 121 aa3.95□□□□□ -1.78
PDH1YPR002W COF1Q03048 143 aaKnown RBP3.95□□□□□ -1.78
PDH1YPR002W MEC1P38111 2368 aa3.95□□□□□ -1.78
PDH1YPR002W IRC21Q04772 201 aa3.94□□□□□ -1.78
PDH1YPR002W YHR212W-AP0CX91 67 aa3.93□□□□□ -1.78
PDH1YPR002W RPB9P27999 122 aa3.93□□□□□ -1.78
PDH1YPR002W CRC1Q12289 327 aa3.93□□□□□ -1.78
PDH1YPR002W YJR107C-AP0CT86 78 aa3.93□□□□□ -1.78
PDH1YPR002W EMC6Q12431 108 aa3.93□□□□□ -1.78
PDH1YPR002W YGR240C-AQ3E786 66 aa3.93□□□□□ -1.78
PDH1YPR002W RAD6P06104 172 aa3.92□□□□□ -1.78
PDH1YPR002W KNH1P50112 268 aa3.92□□□□□ -1.78
PDH1YPR002W RDS3Q06835 107 aaPredicted RBP3.92□□□□□ -1.78
PDH1YPR002W YBR126W-AQ8TGU7 68 aa3.92□□□□□ -1.78
PDH1YPR002W RPL29P05747 59 aaPredicted RBP3.91□□□□□ -1.78
PDH1YPR002W TOM6P33448 61 aa3.91□□□□□ -1.78
PDH1YPR002W YHL018WP38744 120 aaPredicted RBP3.91□□□□□ -1.78
PDH1YPR002W ERI1P62651 68 aaKnown RBP3.91□□□□□ -1.78
PDH1YPR002W ICY1Q04329 127 aa3.91□□□□□ -1.78
PDH1YPR002W YSY6P38374 65 aa3.9□□□□□ -1.78
PDH1YPR002W MPC3P53311 146 aa3.9□□□□□ -1.78
PDH1YPR002W YDL241WQ07738 123 aa3.9□□□□□ -1.78
PDH1YPR002W YDR029WQ12111 104 aa3.9□□□□□ -1.78
PDH1YPR002W YMR175W-AQ3E766 64 aa3.9□□□□□ -1.78
PDH1YPR002W ATP18P81450 59 aa3.89□□□□□ -1.79
PDH1YPR002W YDR274CP87283 123 aa3.89□□□□□ -1.79
PDH1YPR002W ERG28P40030 148 aa3.89□□□□□ -1.79
PDH1YPR002W EDC1P53080 175 aaPredicted RBP3.89□□□□□ -1.79
PDH1YPR002W YCR001WP25347 104 aa3.88□□□□□ -1.79
PDH1YPR002W YDR246W-AQ3E763 66 aa3.88□□□□□ -1.79
PDH1YPR002W YLR361C-AQ3E795 98 aa3.88□□□□□ -1.79
PDH1YPR002W ECM12O13529 151 aa3.87□□□□□ -1.79
PDH1YPR002W YFR009W-AP0C5M9 85 aa3.87□□□□□ -1.79
PDH1YPR002W YBR144CP34215 104 aa3.87□□□□□ -1.79
PDH1YPR002W RPC10P40422 70 aa3.87□□□□□ -1.79
PDH1YPR002W YLR285C-AQ3E771 56 aa3.87□□□□□ -1.79
PDH1YPR002W YLR156WP0CE96 114 aa3.86□□□□□ -1.79
PDH1YPR002W YLR159WP0CE97 114 aa3.86□□□□□ -1.79
PDH1YPR002W YLR161WP0CE98 114 aa3.86□□□□□ -1.79
PDH1YPR002W MVB12P42939 101 aa3.86□□□□□ -1.79
PDH1YPR002W RSM19P53733 91 aaPredicted RBP3.86□□□□□ -1.79
PDH1YPR002W YBL081WP38180 368 aaKnown RBP3.85□□□□□ -1.79
PDH1YPR002W RPL43AP0CX25 92 aaKnown RBP3.85□□□□□ -1.79
PDH1YPR002W RPL43BP0CX26 92 aa3.85□□□□□ -1.79
PDH1YPR002W STF1P01098 86 aa3.84□□□□□ -1.8
PDH1YPR002W RPL33AP05744 107 aaKnown RBP3.84□□□□□ -1.8
PDH1YPR002W UBC4P15731 148 aa3.84□□□□□ -1.8
PDH1YPR002W RPL33BP41056 107 aaKnown RBP3.84□□□□□ -1.8
PDH1YPR002W YMR320WQ04897 101 aa3.84□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms