RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	ECM12	O13529	151 aa		3.66	□□□□□ -1.82
CSL4	YNL232W	QCR9	P22289	66 aa		3.66	□□□□□ -1.82
CSL4	YNL232W	PAM17	P36147	197 aa		3.66	□□□□□ -1.82
CSL4	YNL232W	MSA2	P36157	363 aa		3.66	□□□□□ -1.82
CSL4	YNL232W	VTC1	P40046	129 aa	RIP-Chip data	3.66	□□□□□ -1.82	not detected
CSL4	YNL232W	DAN1	P47178	298 aa		3.65	□□□□□ -1.83
CSL4	YNL232W	COA6	Q3E846	104 aa		3.65	□□□□□ -1.83
CSL4	YNL232W	INO4	P13902	151 aa		3.64	□□□□□ -1.83
CSL4	YNL232W	TDA2	P40045	126 aa		3.64	□□□□□ -1.83
CSL4	YNL232W	ARC15	P40518	154 aa	RIP-Chip data	3.64	□□□□□ -1.83	not detected
CSL4	YNL232W	MSL1	P40567	111 aa	Predicted RBP	3.64	□□□□□ -1.83
CSL4	YNL232W	YOR376W-A	Q3E805	51 aa		3.64	□□□□□ -1.83
CSL4	YNL232W	YLR342W-A	Q3E810	57 aa		3.64	□□□□□ -1.83
CSL4	YNL232W	YMR122W-A	Q3E842	84 aa		3.64	□□□□□ -1.83
CSL4	YNL232W	YAL064W	P39711	94 aa		3.63	□□□□□ -1.83
CSL4	YNL232W	DAD4	P69851	72 aa		3.63	□□□□□ -1.83
CSL4	YNL232W	KSH1	Q8TGJ3	72 aa		3.63	□□□□□ -1.83
CSL4	YNL232W	FUN14	P18411	198 aa		3.62	□□□□□ -1.83
CSL4	YNL232W	YHR173C	P38864	112 aa		3.62	□□□□□ -1.83
CSL4	YNL232W	YJR085C	P47131	105 aa	Known RBP	3.62	□□□□□ -1.83
CSL4	YNL232W	UPS3	Q04006	179 aa		3.62	□□□□□ -1.83
CSL4	YNL232W	SEN15	Q04675	128 aa		3.62	□□□□□ -1.83
CSL4	YNL232W	SCS22	Q6Q595	175 aa		3.62	□□□□□ -1.83
CSL4	YNL232W	PAI3	P01094	68 aa		3.61	□□□□□ -1.83
CSL4	YNL232W	UBC4	P15731	148 aa		3.61	□□□□□ -1.83
CSL4	YNL232W	SSS1	P35179	80 aa		3.61	□□□□□ -1.83
CSL4	YNL232W	BNS1	P50084	137 aa		3.61	□□□□□ -1.83
CSL4	YNL232W	PMP3	P87284	55 aa		3.61	□□□□□ -1.83
CSL4	YNL232W	LIP1	Q03579	150 aa		3.61	□□□□□ -1.83
CSL4	YNL232W	ATP20	Q12233	115 aa		3.61	□□□□□ -1.83
CSL4	YNL232W	DAD1	Q12248	94 aa		3.61	□□□□□ -1.83
CSL4	YNL232W	YLR194C	Q05777	254 aa		3.6	□□□□□ -1.83
CSL4	YNL232W	CYB5	P40312	120 aa		3.59	□□□□□ -1.83
CSL4	YNL232W	CWP2	P43497	92 aa		3.59	□□□□□ -1.83
CSL4	YNL232W	YFL065C	P43539	102 aa		3.59	□□□□□ -1.83
CSL4	YNL232W	ATP19	P81451	68 aa		3.59	□□□□□ -1.83
CSL4	YNL232W	YPR203W	Q08994	102 aa		3.59	□□□□□ -1.83
CSL4	YNL232W	YKL044W	P36092	106 aa		3.58	□□□□□ -1.84
CSL4	YNL232W	YHL042W	P38729	150 aa		3.58	□□□□□ -1.84
CSL4	YNL232W	AIM19	P40502	157 aa		3.58	□□□□□ -1.84
CSL4	YNL232W	YGL118C	P53132	145 aa		3.58	□□□□□ -1.84
CSL4	YNL232W	THG1	P53215	237 aa	Known RBP	3.58	□□□□□ -1.84
CSL4	YNL232W	SNA2	P56508	79 aa		3.58	□□□□□ -1.84
CSL4	YNL232W	MRPS16	Q02608	121 aa		3.58	□□□□□ -1.84
CSL4	YNL232W	FYV12	Q08559	129 aa		3.58	□□□□□ -1.84
CSL4	YNL232W	PPT2	Q12036	173 aa		3.58	□□□□□ -1.84
CSL4	YNL232W	PCC1	Q3E833	88 aa		3.58	□□□□□ -1.84
CSL4	YNL232W	YMR295C	Q03559	197 aa		3.57	□□□□□ -1.84
CSL4	YNL232W	GPI19	Q04082	140 aa		3.57	□□□□□ -1.84
CSL4	YNL232W	MIC10	Q96VH5	97 aa		3.57	□□□□□ -1.84
CSL4	YNL232W	SNN1	P48232	102 aa		3.56	□□□□□ -1.84
CSL4	YNL232W	POR1	P04840	283 aa	Known RBP	3.55	□□□□□ -1.84
CSL4	YNL232W	YHL018W	P38744	120 aa	Predicted RBP	3.55	□□□□□ -1.84
CSL4	YNL232W	VMA21	P41806	77 aa		3.55	□□□□□ -1.84
CSL4	YNL232W	KNH1	P50112	268 aa		3.55	□□□□□ -1.84
CSL4	YNL232W	YHR125W	P38831	101 aa		3.54	□□□□□ -1.84
CSL4	YNL232W	RSM19	P53733	91 aa	Predicted RBP	3.54	□□□□□ -1.84
CSL4	YNL232W	YOR381W-A	Q3E804	55 aa		3.54	□□□□□ -1.84
CSL4	YNL232W	YCR085W	P25650	117 aa		3.53	□□□□□ -1.84
CSL4	YNL232W	FZF1	P32805	299 aa		3.53	□□□□□ -1.84
CSL4	YNL232W	QCR10	P37299	77 aa		3.53	□□□□□ -1.84
CSL4	YNL232W	YIL163C	P40448	117 aa		3.53	□□□□□ -1.84
CSL4	YNL232W	HUR1	P45820	110 aa		3.53	□□□□□ -1.84
CSL4	YNL232W	YLR296W	Q05898	108 aa		3.53	□□□□□ -1.84
CSL4	YNL232W	FYV5	P25585	152 aa		3.52	□□□□□ -1.85
CSL4	YNL232W	RPC10	P40422	70 aa		3.52	□□□□□ -1.85
CSL4	YNL232W	YOR015W	Q12169	119 aa		3.52	□□□□□ -1.85
CSL4	YNL232W	YLR363W-A	Q3E747	85 aa		3.52	□□□□□ -1.85
CSL4	YNL232W	SOM1	Q05676	74 aa		3.51	□□□□□ -1.85
CSL4	YNL232W	ECM19	Q06011	112 aa		3.51	□□□□□ -1.85
CSL4	YNL232W	EMC6	Q12431	108 aa		3.51	□□□□□ -1.85
CSL4	YNL232W	RPA12	P32529	125 aa	Known RBP	3.5	□□□□□ -1.85
CSL4	YNL232W	YBR292C	P38357	123 aa		3.5	□□□□□ -1.85
CSL4	YNL232W	YGL149W	P53116	101 aa		3.5	□□□□□ -1.85
CSL4	YNL232W	MPC3	P53311	146 aa		3.5	□□□□□ -1.85
CSL4	YNL232W	YEL045C	P32616	141 aa		3.49	□□□□□ -1.85
CSL4	YNL232W	MID2	P36027	376 aa		3.49	□□□□□ -1.85
CSL4	YNL232W	MRPS9	P38120	278 aa		3.49	□□□□□ -1.85
CSL4	YNL232W	ATX1	P38636	73 aa		3.49	□□□□□ -1.85
CSL4	YNL232W	IGD1	P43598	195 aa		3.49	□□□□□ -1.85
CSL4	YNL232W	YOR105W	Q08504	108 aa		3.49	□□□□□ -1.85
CSL4	YNL232W	CMC4	Q3E7A9	73 aa		3.49	□□□□□ -1.85
CSL4	YNL232W	ENV10	Q99382	181 aa		3.49	□□□□□ -1.85
CSL4	YNL232W	KRE1	P17260	313 aa		3.48	□□□□□ -1.85
CSL4	YNL232W	YER187W	P40102	141 aa		3.48	□□□□□ -1.85
CSL4	YNL232W	SMD3	P43321	101 aa	Known RBP	3.48	□□□□□ -1.85
CSL4	YNL232W	YDR042C	Q03205	200 aa		3.48	□□□□□ -1.85
CSL4	YNL232W	CUE4	Q04201	117 aa	Predicted RBP	3.48	□□□□□ -1.85
CSL4	YNL232W	NAT5	Q08689	176 aa		3.48	□□□□□ -1.85
CSL4	YNL232W	MRPL31	P14063	131 aa	Predicted RBP	3.47	□□□□□ -1.85
CSL4	YNL232W	HSP10	P38910	106 aa		3.47	□□□□□ -1.85
CSL4	YNL232W	YML079W	Q03629	201 aa		3.47	□□□□□ -1.85
CSL4	YNL232W	PAU21	P0CE86	164 aa		3.46	□□□□□ -1.86
CSL4	YNL232W	PAU22	P0CE87	164 aa		3.46	□□□□□ -1.86
CSL4	YNL232W	TOM6	P33448	61 aa		3.46	□□□□□ -1.86
CSL4	YNL232W	POP3	P53833	195 aa	Predicted RBP	3.46	□□□□□ -1.86
CSL4	YNL232W	PAU23	Q07987	124 aa		3.46	□□□□□ -1.86
CSL4	YNL232W	YPL261C	Q08976	102 aa		3.46	□□□□□ -1.86
CSL4	YNL232W	PAU17	Q12370	124 aa		3.46	□□□□□ -1.86
CSL4	YNL232W	YBR209W	P38311	105 aa		3.45	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms