RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C YLR162WQ06235 118 aa2.47□□□□□ -2.01
SQS1YNL224C YOR314WQ12506 109 aa2.47□□□□□ -2.01
SQS1YNL224C YIL156W-BQ2V2P4 73 aa2.47□□□□□ -2.01
SQS1YNL224C YER078W-AQ3E7A2 54 aa2.47□□□□□ -2.01
SQS1YNL224C HKR1P41809 1802 aa2.47□□□□□ -2.01
SQS1YNL224C ERG2P32352 222 aa2.46□□□□□ -2.02
SQS1YNL224C MRPL38P35996 138 aaPredicted RBP2.46□□□□□ -2.02
SQS1YNL224C HOT13P36078 116 aa2.46□□□□□ -2.02
SQS1YNL224C YGL118CP53132 145 aa2.46□□□□□ -2.02
SQS1YNL224C RPL26BP53221 127 aaKnown RBP2.46□□□□□ -2.02
SQS1YNL224C YOL118CQ08259 102 aa2.46□□□□□ -2.02
SQS1YNL224C AIM26P32858 118 aa2.46□□□□□ -2.02
SQS1YNL224C YIL163CP40448 117 aa2.46□□□□□ -2.02
SQS1YNL224C YLR194CQ05777 254 aa2.46□□□□□ -2.02
SQS1YNL224C VPS68Q12016 184 aa2.46□□□□□ -2.02
SQS1YNL224C BSC1Q12140 328 aa2.46□□□□□ -2.02
SQS1YNL224C FLO9P39712 1322 aa2.45□□□□□ -2.02
SQS1YNL224C RPS23AP0CX29 145 aaKnown RBP2.45□□□□□ -2.02
SQS1YNL224C RPS23BP0CX30 145 aa2.45□□□□□ -2.02
SQS1YNL224C YMR244WQ04018 355 aa2.45□□□□□ -2.02
SQS1YNL224C YGR035W-AQ45U48 73 aa2.45□□□□□ -2.02
SQS1YNL224C HMRA2P0CY13 119 aa2.45□□□□□ -2.02
SQS1YNL224C QCR9P22289 66 aa2.45□□□□□ -2.02
SQS1YNL224C DCV1P43595 202 aa2.45□□□□□ -2.02
SQS1YNL224C MRPS8Q03799 155 aa2.45□□□□□ -2.02
SQS1YNL224C YLR285C-AQ3E771 56 aa2.45□□□□□ -2.02
SQS1YNL224C YOR032W-AQ8TGS1 66 aa2.45□□□□□ -2.02
SQS1YNL224C MPC2P38857 129 aa2.44□□□□□ -2.02
SQS1YNL224C MIG3P39943 394 aa2.44□□□□□ -2.02
SQS1YNL224C CRH1P53301 507 aa2.44□□□□□ -2.02
SQS1YNL224C YNR077CP53758 84 aa2.44□□□□□ -2.02
SQS1YNL224C COA2Q3E823 68 aa2.44□□□□□ -2.02
SQS1YNL224C FAS1P07149 2051 aaKnown RBP2.44□□□□□ -2.02
SQS1YNL224C YPR096CO13587 100 aa2.43□□□□□ -2.02
SQS1YNL224C YDL022C-AP0C5L6 82 aa2.43□□□□□ -2.02
SQS1YNL224C SRX1P36077 127 aa2.43□□□□□ -2.02
SQS1YNL224C MRPL27P36526 146 aaPredicted RBP2.43□□□□□ -2.02
SQS1YNL224C SPI1P40092 148 aa2.43□□□□□ -2.02
SQS1YNL224C YOR034C-AQ3E735 80 aa2.43□□□□□ -2.02
SQS1YNL224C FPR1P20081 114 aaKnown RBP2.42□□□□□ -2.02
SQS1YNL224C YGR269WP40326 108 aa2.42□□□□□ -2.02
SQS1YNL224C AIM19P40502 157 aa2.42□□□□□ -2.02
SQS1YNL224C ARC15P40518 154 aaRIP-Chip data2.42□□□□□ -2.02not detected
SQS1YNL224C YPI1P43587 155 aa2.42□□□□□ -2.02
SQS1YNL224C YCR043CP25361 127 aa2.42□□□□□ -2.02
SQS1YNL224C COX14P39103 70 aa2.42□□□□□ -2.02
SQS1YNL224C YJR085CP47131 105 aaKnown RBP2.42□□□□□ -2.02
SQS1YNL224C RPL36BO14455 100 aaKnown RBP2.41□□□□□ -2.02
SQS1YNL224C RPL36AP05745 100 aaPredicted RBP2.41□□□□□ -2.02
SQS1YNL224C REE1P40893 198 aa2.41□□□□□ -2.02
SQS1YNL224C IGD1P43598 195 aa2.41□□□□□ -2.02
SQS1YNL224C ECM19Q06011 112 aa2.41□□□□□ -2.02
SQS1YNL224C YOL029CQ08187 201 aa2.41□□□□□ -2.02
SQS1YNL224C CMC4Q3E7A9 73 aa2.41□□□□□ -2.02
SQS1YNL224C YNL208WP40159 199 aaKnown RBP2.41□□□□□ -2.02
SQS1YNL224C HUA1P40325 198 aa2.41□□□□□ -2.02
SQS1YNL224C YDR010CQ12426 110 aa2.41□□□□□ -2.02
SQS1YNL224C YCR095W-AQ3E787 52 aa2.41□□□□□ -2.02
SQS1YNL224C HSP150P32478 413 aa2.4□□□□□ -2.02
SQS1YNL224C ATP19P81451 68 aa2.4□□□□□ -2.02
SQS1YNL224C GLT1Q12680 2145 aaKnown RBP2.4□□□□□ -2.02
SQS1YNL224C NOP10Q6Q547 58 aaPredicted RBP2.4□□□□□ -2.02
SQS1YNL224C ACC1Q00955 2233 aaKnown RBP2.4□□□□□ -2.03
SQS1YNL224C IRC21Q04772 201 aa2.4□□□□□ -2.03
SQS1YNL224C RPS30AP0CX33 63 aaKnown RBP2.39□□□□□ -2.03
SQS1YNL224C RPS30BP0CX34 63 aaKnown RBP2.39□□□□□ -2.03
SQS1YNL224C YHR022CP38763 256 aa2.39□□□□□ -2.03
SQS1YNL224C KRE9P39005 276 aa2.39□□□□□ -2.03
SQS1YNL224C POR2P40478 281 aa2.39□□□□□ -2.03
SQS1YNL224C YNL190WP53872 204 aa2.39□□□□□ -2.03
SQS1YNL224C COX9P07255 59 aa2.39□□□□□ -2.03
SQS1YNL224C YKL065W-AQ2V2P2 73 aa2.39□□□□□ -2.03
SQS1YNL224C QCR8P08525 94 aa2.38□□□□□ -2.03
SQS1YNL224C YHR125WP38831 101 aa2.38□□□□□ -2.03
SQS1YNL224C YMR007WQ03675 126 aa2.38□□□□□ -2.03
SQS1YNL224C FIT2Q08906 153 aa2.38□□□□□ -2.03
SQS1YNL224C YJL197C-AP0C5P0 93 aa2.37□□□□□ -2.03
SQS1YNL224C YPR013CQ12145 317 aa2.37□□□□□ -2.03
SQS1YNL224C YLR111WQ12528 110 aa2.37□□□□□ -2.03
SQS1YNL224C API2Q04413 109 aa2.37□□□□□ -2.03
SQS1YNL224C YDR461C-AQ2V2P7 80 aa2.37□□□□□ -2.03
SQS1YNL224C PAU7P39545 55 aa2.36□□□□□ -2.03
SQS1YNL224C YOL166W-AQ8TGJ1 51 aa2.36□□□□□ -2.03
SQS1YNL224C MRX7P53869 86 aa2.36□□□□□ -2.03
SQS1YNL224C SNA2P56508 79 aa2.35□□□□□ -2.03
SQS1YNL224C FIG2P25653 1609 aa2.35□□□□□ -2.03
SQS1YNL224C CCW14O13547 238 aa2.35□□□□□ -2.03
SQS1YNL224C YHR032W-AP0C5N6 59 aa2.35□□□□□ -2.03
SQS1YNL224C YHL037CP38733 133 aa2.35□□□□□ -2.03
SQS1YNL224C YNL042W-BQ3E7Z2 85 aa2.35□□□□□ -2.03
SQS1YNL224C YLR236CA0A023PZG4 107 aa2.34□□□□□ -2.03
SQS1YNL224C YJL027CP47063 138 aaPredicted RBP2.34□□□□□ -2.03
SQS1YNL224C CCW12Q12127 133 aa2.34□□□□□ -2.04
SQS1YNL224C PRM7Q12459 698 aa2.34□□□□□ -2.04
SQS1YNL224C YKR032WP36127 104 aa2.33□□□□□ -2.04
SQS1YNL224C YBR027CP38220 110 aa2.33□□□□□ -2.04
SQS1YNL224C BLM10P43583 2143 aa2.33□□□□□ -2.04
SQS1YNL224C YOL085CQ99345 113 aa2.33□□□□□ -2.04
SQS1YNL224C FLO1P32768 1537 aa2.32□□□□□ -2.04
SQS1YNL224C RPS11AP0CX47 156 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms