RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A CMC4Q3E7A9 73 aa1.79□□□□□ -2.12
YSF3YNL138W-A RPS25BP0C0T4 108 aaKnown RBP1.78□□□□□ -2.12
YSF3YNL138W-A YHL042WP38729 150 aa1.78□□□□□ -2.12
YSF3YNL138W-A TDA2P40045 126 aa1.78□□□□□ -2.12
YSF3YNL138W-A EMC5P40540 141 aa1.78□□□□□ -2.12
YSF3YNL138W-A KEI1Q06346 221 aa1.78□□□□□ -2.12
YSF3YNL138W-A RPS25AQ3E792 108 aaPredicted RBP1.78□□□□□ -2.12
YSF3YNL138W-A YER039C-AP0CD97 72 aa1.77□□□□□ -2.13
YSF3YNL138W-A SEC59P20048 519 aa1.77□□□□□ -2.13
YSF3YNL138W-A DSE2P38844 325 aa1.77□□□□□ -2.13
YSF3YNL138W-A HSP10P38910 106 aa1.77□□□□□ -2.13
YSF3YNL138W-A YAR029WP39549 74 aa1.77□□□□□ -2.13
YSF3YNL138W-A ERV14P53173 138 aa1.77□□□□□ -2.13
YSF3YNL138W-A YHR007C-AQ07074 71 aa1.77□□□□□ -2.13
YSF3YNL138W-A NAT5Q08689 176 aa1.77□□□□□ -2.13
YSF3YNL138W-A YDL157CQ12082 118 aa1.77□□□□□ -2.13
YSF3YNL138W-A YDR029WQ12111 104 aa1.77□□□□□ -2.13
YSF3YNL138W-A POC4Q12245 148 aaPredicted RBP1.77□□□□□ -2.13
YSF3YNL138W-A COX8P04039 78 aa1.76□□□□□ -2.13
YSF3YNL138W-A YBR090CP38253 122 aa1.76□□□□□ -2.13
YSF3YNL138W-A HPA3P39979 161 aa1.76□□□□□ -2.13
YSF3YNL138W-A YAE1P47118 141 aaPredicted RBP1.76□□□□□ -2.13
YSF3YNL138W-A CYT2Q00873 224 aa1.76□□□□□ -2.13
YSF3YNL138W-A SOM1Q05676 74 aa1.76□□□□□ -2.13
YSF3YNL138W-A YOR385WQ08909 290 aa1.76□□□□□ -2.13
YSF3YNL138W-A HAP3P13434 144 aa1.75□□□□□ -2.13
YSF3YNL138W-A QCR10P37299 77 aa1.75□□□□□ -2.13
YSF3YNL138W-A LSM2P38203 95 aaKnown RBP1.75□□□□□ -2.13
YSF3YNL138W-A YHL018WP38744 120 aaPredicted RBP1.75□□□□□ -2.13
YSF3YNL138W-A YEL067CP39978 195 aa1.75□□□□□ -2.13
YSF3YNL138W-A AIM19P40502 157 aa1.75□□□□□ -2.13
YSF3YNL138W-A GPI19Q04082 140 aa1.75□□□□□ -2.13
YSF3YNL138W-A FYV5P25585 152 aa1.74□□□□□ -2.13
YSF3YNL138W-A EMP24P32803 203 aaKnown RBP1.74□□□□□ -2.13
YSF3YNL138W-A YKL044WP36092 106 aa1.74□□□□□ -2.13
YSF3YNL138W-A YBR013CP38215 129 aa1.74□□□□□ -2.13
YSF3YNL138W-A YGL149WP53116 101 aa1.74□□□□□ -2.13
YSF3YNL138W-A YGR164WP53291 111 aa1.74□□□□□ -2.13
YSF3YNL138W-A YMR090WQ04304 227 aaKnown RBP1.74□□□□□ -2.13
YSF3YNL138W-A YDL241WQ07738 123 aa1.74□□□□□ -2.13
YSF3YNL138W-A RPL13AQ12690 199 aaPredicted RBP1.74□□□□□ -2.13
YSF3YNL138W-A YPR145C-AQ2V2P0 78 aa1.74□□□□□ -2.13
YSF3YNL138W-A MED11Q99278 115 aa1.74□□□□□ -2.13
YSF3YNL138W-A YGL010WP25338 174 aa1.73□□□□□ -2.13
YSF3YNL138W-A FPR2P32472 135 aa1.73□□□□□ -2.13
YSF3YNL138W-A YMR103CQ04436 120 aa1.73□□□□□ -2.13
YSF3YNL138W-A YPR153WQ06537 140 aa1.73□□□□□ -2.13
YSF3YNL138W-A SCP1Q08873 200 aa1.73□□□□□ -2.13
YSF3YNL138W-A COA6Q3E846 104 aa1.73□□□□□ -2.13
YSF3YNL138W-A MRPL11P36521 249 aaPredicted RBP1.72□□□□□ -2.13
YSF3YNL138W-A YEA6P39953 335 aa1.72□□□□□ -2.13
YSF3YNL138W-A SPI1P40092 148 aa1.72□□□□□ -2.13
YSF3YNL138W-A VMA21P41806 77 aa1.72□□□□□ -2.13
YSF3YNL138W-A YLR194CQ05777 254 aa1.72□□□□□ -2.13
YSF3YNL138W-A YOR376W-AQ3E805 51 aa1.72□□□□□ -2.13
YSF3YNL138W-A PAU21P0CE86 164 aa1.71□□□□□ -2.14
YSF3YNL138W-A PAU22P0CE87 164 aa1.71□□□□□ -2.14
YSF3YNL138W-A UBC5P15732 148 aa1.71□□□□□ -2.14
YSF3YNL138W-A FUN14P18411 198 aa1.71□□□□□ -2.14
YSF3YNL138W-A SNA2P56508 79 aa1.71□□□□□ -2.14
YSF3YNL138W-A FIT2Q08906 153 aa1.71□□□□□ -2.14
YSF3YNL138W-A DAD1Q12248 94 aa1.71□□□□□ -2.14
YSF3YNL138W-A YPR010C-AA5Z2X5 72 aa1.7□□□□□ -2.14
YSF3YNL138W-A RPL36BO14455 100 aaKnown RBP1.7□□□□□ -2.14
YSF3YNL138W-A RPL36AP05745 100 aaPredicted RBP1.7□□□□□ -2.14
YSF3YNL138W-A YEL014CP39999 101 aa1.7□□□□□ -2.14
YSF3YNL138W-A GTT1P40582 234 aa1.7□□□□□ -2.14
YSF3YNL138W-A DCV1P43595 202 aa1.7□□□□□ -2.14
YSF3YNL138W-A RPL37BP51402 88 aaKnown RBP1.7□□□□□ -2.14
YSF3YNL138W-A BRP1P53194 125 aa1.7□□□□□ -2.14
YSF3YNL138W-A PRE1P22141 198 aaKnown RBP1.69□□□□□ -2.14
YSF3YNL138W-A MRP17P28778 131 aa1.69□□□□□ -2.14
YSF3YNL138W-A ERI1P62651 68 aaKnown RBP1.69□□□□□ -2.14
YSF3YNL138W-A HPA2Q06592 156 aa1.69□□□□□ -2.14
YSF3YNL138W-A YPL261CQ08976 102 aa1.68□□□□□ -2.14
YSF3YNL138W-A SRB6P32570 121 aa1.67□□□□□ -2.14
YSF3YNL138W-A YBR242WP38331 238 aa1.67□□□□□ -2.14
YSF3YNL138W-A YHR130CP38834 111 aa1.67□□□□□ -2.14
YSF3YNL138W-A HUR1P45820 110 aa1.67□□□□□ -2.14
YSF3YNL138W-A MIC27P50945 234 aa1.67□□□□□ -2.14
YSF3YNL138W-A YBR200W-AQ3E755 54 aa1.67□□□□□ -2.14
YSF3YNL138W-A YMR122W-AQ3E842 84 aa1.67□□□□□ -2.14
YSF3YNL138W-A UBC4P15731 148 aa1.66□□□□□ -2.14
YSF3YNL138W-A YER187WP40102 141 aa1.66□□□□□ -2.14
YSF3YNL138W-A SNN1P48232 102 aa1.66□□□□□ -2.14
YSF3YNL138W-A YLR296WQ05898 108 aa1.66□□□□□ -2.14
YSF3YNL138W-A OST5Q92316 86 aa1.66□□□□□ -2.14
YSF3YNL138W-A PFY1P07274 126 aa1.65□□□□□ -2.15
YSF3YNL138W-A ATG8P38182 117 aaRIP-Chip data1.65□□□□□ -2.15not detected
YSF3YNL138W-A YMR141CP40211 102 aa1.65□□□□□ -2.15
YSF3YNL138W-A RPL13BP40212 199 aaKnown RBP1.65□□□□□ -2.15
YSF3YNL138W-A COA2Q3E823 68 aa1.65□□□□□ -2.15
YSF3YNL138W-A PCC1Q3E833 88 aa1.65□□□□□ -2.15
YSF3YNL138W-A MIC10Q96VH5 97 aa1.65□□□□□ -2.15
YSF3YNL138W-A YBR219CP38317 127 aa1.64□□□□□ -2.15
YSF3YNL138W-A HUA1P40325 198 aa1.64□□□□□ -2.15
YSF3YNL138W-A MSL1P40567 111 aaPredicted RBP1.64□□□□□ -2.15
YSF3YNL138W-A YIL014C-AQ02598 104 aa1.64□□□□□ -2.15
YSF3YNL138W-A PAU19P0CE85 124 aa1.63□□□□□ -2.15
YSF3YNL138W-A PAU3P25610 124 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms