RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	NAT5	Q08689	176 aa		3.21	□□□□□ -1.89
ATM1	YMR301C	SVP26	P38869	228 aa		3.21	□□□□□ -1.9
ATM1	YMR301C	MSL1	P40567	111 aa	Predicted RBP	3.21	□□□□□ -1.9
ATM1	YMR301C	YJR085C	P47131	105 aa	Known RBP	3.21	□□□□□ -1.9
ATM1	YMR301C	YPL229W	Q99395	206 aa		3.21	□□□□□ -1.9
ATM1	YMR301C	MRPL11	P36521	249 aa	Predicted RBP	3.2	□□□□□ -1.9
ATM1	YMR301C	PET8	P38921	284 aa		3.2	□□□□□ -1.9
ATM1	YMR301C	YDR029W	Q12111	104 aa		3.2	□□□□□ -1.9
ATM1	YMR301C	VMA21	P41806	77 aa		3.2	□□□□□ -1.9
ATM1	YMR301C	YGL088W	P53151	121 aa		3.2	□□□□□ -1.9
ATM1	YMR301C	ECM12	O13529	151 aa		3.19	□□□□□ -1.9
ATM1	YMR301C	MRPL31	P14063	131 aa	Predicted RBP	3.19	□□□□□ -1.9
ATM1	YMR301C	PAM17	P36147	197 aa		3.19	□□□□□ -1.9
ATM1	YMR301C	YDR115W	Q04598	105 aa		3.19	□□□□□ -1.9
ATM1	YMR301C	HTL1	Q9URQ5	78 aa		3.19	□□□□□ -1.9
ATM1	YMR301C	YBL081W	P38180	368 aa	Known RBP	3.18	□□□□□ -1.9
ATM1	YMR301C	YER181C	P40097	107 aa		3.18	□□□□□ -1.9
ATM1	YMR301C	PPT2	Q12036	173 aa		3.18	□□□□□ -1.9
ATM1	YMR301C	POR1	P04840	283 aa	Known RBP	3.18	□□□□□ -1.9
ATM1	YMR301C	YDR034C-A	P0C289	58 aa		3.18	□□□□□ -1.9
ATM1	YMR301C	ERI1	P62651	68 aa	Known RBP	3.18	□□□□□ -1.9
ATM1	YMR301C	PMP3	P87284	55 aa		3.18	□□□□□ -1.9
ATM1	YMR301C	SMT3	Q12306	101 aa	Known RBP	3.18	□□□□□ -1.9
ATM1	YMR301C	KSH1	Q8TGJ3	72 aa		3.18	□□□□□ -1.9
ATM1	YMR301C	YAR029W	P39549	74 aa		3.17	□□□□□ -1.9
ATM1	YMR301C	PHS1	P40857	217 aa		3.17	□□□□□ -1.9
ATM1	YMR301C	CWP2	P43497	92 aa		3.17	□□□□□ -1.9
ATM1	YMR301C	YGL193C	P53097	103 aa		3.17	□□□□□ -1.9
ATM1	YMR301C	GPI19	Q04082	140 aa		3.17	□□□□□ -1.9
ATM1	YMR301C	YCL021W-A	Q96VH3	125 aa		3.17	□□□□□ -1.9
ATM1	YMR301C	KRE1	P17260	313 aa		3.16	□□□□□ -1.9
ATM1	YMR301C	YER134C	P40081	178 aa		3.16	□□□□□ -1.9
ATM1	YMR301C	SDS23	P53172	527 aa		3.16	□□□□□ -1.9
ATM1	YMR301C	YMR122W-A	Q3E842	84 aa		3.16	□□□□□ -1.9
ATM1	YMR301C	YCR085W	P25650	117 aa		3.16	□□□□□ -1.9
ATM1	YMR301C	YNL198C	P40166	100 aa		3.16	□□□□□ -1.9
ATM1	YMR301C	ARC15	P40518	154 aa	RIP-Chip data	3.16	□□□□□ -1.9	not detected
ATM1	YMR301C	BNS1	P50084	137 aa		3.16	□□□□□ -1.9
ATM1	YMR301C	YAR023C	D6VPM8	179 aa		3.15	□□□□□ -1.9
ATM1	YMR301C	MID2	P36027	376 aa		3.15	□□□□□ -1.9
ATM1	YMR301C	EDC2	P40023	145 aa	Predicted RBP	3.15	□□□□□ -1.9
ATM1	YMR301C	PAU15	P40585	124 aa		3.15	□□□□□ -1.9
ATM1	YMR301C	YBL008W-A	Q3E821	79 aa		3.15	□□□□□ -1.9
ATM1	YMR301C	RPA12	P32529	125 aa	Known RBP	3.15	□□□□□ -1.91
ATM1	YMR301C	YPR010C-A	A5Z2X5	72 aa		3.14	□□□□□ -1.91
ATM1	YMR301C	YHR139C-A	O13536	103 aa		3.14	□□□□□ -1.91
ATM1	YMR301C	SMP1	P38128	452 aa		3.14	□□□□□ -1.91
ATM1	YMR301C	SKI6	P46948	246 aa	Predicted RBP	3.14	□□□□□ -1.91
ATM1	YMR301C	DFM1	Q12743	341 aa	Known RBP	3.14	□□□□□ -1.91
ATM1	YMR301C	YER078W-A	Q3E7A2	54 aa		3.14	□□□□□ -1.91
ATM1	YMR301C	TDA8	Q6B2U8	126 aa		3.14	□□□□□ -1.91
ATM1	YMR301C	ENV10	Q99382	181 aa		3.14	□□□□□ -1.91
ATM1	YMR301C	YGL010W	P25338	174 aa		3.13	□□□□□ -1.91
ATM1	YMR301C	SMD1	Q02260	146 aa	Predicted RBP	3.13	□□□□□ -1.91
ATM1	YMR301C	YDL157C	Q12082	118 aa		3.13	□□□□□ -1.91
ATM1	YMR301C	UBC4	P15731	148 aa		3.13	□□□□□ -1.91
ATM1	YMR301C	YBR209W	P38311	105 aa		3.13	□□□□□ -1.91
ATM1	YMR301C	ATX1	P38636	73 aa		3.13	□□□□□ -1.91
ATM1	YMR301C	DCV1	P43595	202 aa		3.13	□□□□□ -1.91
ATM1	YMR301C	YDR119W-A	Q2V2P9	66 aa		3.13	□□□□□ -1.91
ATM1	YMR301C	YCR050C	P25630	102 aa		3.12	□□□□□ -1.91
ATM1	YMR301C	YKR032W	P36127	104 aa		3.12	□□□□□ -1.91
ATM1	YMR301C	PAU7	P39545	55 aa		3.12	□□□□□ -1.91
ATM1	YMR301C	PAU5	P43575	122 aa		3.12	□□□□□ -1.91
ATM1	YMR301C	YFR032C-B	Q8TGU2	87 aa		3.12	□□□□□ -1.91
ATM1	YMR301C	PAU19	P0CE85	124 aa		3.12	□□□□□ -1.91
ATM1	YMR301C	PAU21	P0CE86	164 aa		3.12	□□□□□ -1.91
ATM1	YMR301C	PAU22	P0CE87	164 aa		3.12	□□□□□ -1.91
ATM1	YMR301C	PAU3	P25610	124 aa		3.12	□□□□□ -1.91
ATM1	YMR301C	YHL018W	P38744	120 aa	Predicted RBP	3.12	□□□□□ -1.91
ATM1	YMR301C	MRPS9	P38120	278 aa		3.11	□□□□□ -1.91
ATM1	YMR301C	KNH1	P50112	268 aa		3.11	□□□□□ -1.91
ATM1	YMR301C	YLR307C-A	Q3E825	87 aa		3.11	□□□□□ -1.91
ATM1	YMR301C	YAL064W	P39711	94 aa		3.1	□□□□□ -1.91
ATM1	YMR301C	YMR175W-A	Q3E766	64 aa		3.1	□□□□□ -1.91
ATM1	YMR301C	YML100W-A	Q8TGT0	57 aa		3.1	□□□□□ -1.91
ATM1	YMR301C	BET1	P22804	142 aa		3.09	□□□□□ -1.91
ATM1	YMR301C	SPG1	P50088	95 aa		3.09	□□□□□ -1.91
ATM1	YMR301C	YLR194C	Q05777	254 aa		3.09	□□□□□ -1.91
ATM1	YMR301C	YIL102C-A	Q2V2P5	75 aa		3.09	□□□□□ -1.91
ATM1	YMR301C	YOR020W-A	Q3E824	90 aa		3.09	□□□□□ -1.91
ATM1	YMR301C	HSP10	P38910	106 aa		3.08	□□□□□ -1.92
ATM1	YMR301C	IGD1	P43598	195 aa		3.08	□□□□□ -1.92
ATM1	YMR301C	SNA2	P56508	79 aa		3.08	□□□□□ -1.92
ATM1	YMR301C	YOL014W	Q08110	124 aa		3.08	□□□□□ -1.92
ATM1	YMR301C	MIC10	Q96VH5	97 aa		3.08	□□□□□ -1.92
ATM1	YMR301C	TOM6	P33448	61 aa		3.08	□□□□□ -1.92
ATM1	YMR301C	YFL019C	P43576	117 aa		3.08	□□□□□ -1.92
ATM1	YMR301C	LCL1	Q02786	101 aa		3.07	□□□□□ -1.92
ATM1	YMR301C	YDR042C	Q03205	200 aa		3.07	□□□□□ -1.92
ATM1	YMR301C	YLR363W-A	Q3E747	85 aa		3.07	□□□□□ -1.92
ATM1	YMR301C	YOR376W-A	Q3E805	51 aa		3.07	□□□□□ -1.92
ATM1	YMR301C	PAU16	P35994	123 aa		3.07	□□□□□ -1.92
ATM1	YMR301C	YBR219C	P38317	127 aa		3.07	□□□□□ -1.92
ATM1	YMR301C	RPC10	P40422	70 aa		3.07	□□□□□ -1.92
ATM1	YMR301C	YJR146W	P47174	117 aa		3.07	□□□□□ -1.92
ATM1	YMR301C	RSM19	P53733	91 aa	Predicted RBP	3.07	□□□□□ -1.92
ATM1	YMR301C	YFL041W-A	Q3E817	63 aa		3.07	□□□□□ -1.92
ATM1	YMR301C	YEL008W	P40001	126 aa		3.05	□□□□□ -1.92
ATM1	YMR301C	POP3	P53833	195 aa	Predicted RBP	3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms