RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W RPS11BP0CX48 156 aaKnown RBP1.34□□□□□ -2.2
RTP1YMR185W HOT13P36078 116 aa1.34□□□□□ -2.2
RTP1YMR185W YSY6P38374 65 aa1.34□□□□□ -2.2
RTP1YMR185W MIG3P39943 394 aa1.34□□□□□ -2.2
RTP1YMR185W VHS2P40463 436 aa1.34□□□□□ -2.2
RTP1YMR185W PMP3P87284 55 aa1.34□□□□□ -2.2
RTP1YMR185W COF1Q03048 143 aaKnown RBP1.34□□□□□ -2.2
RTP1YMR185W SPG4Q04438 115 aa1.34□□□□□ -2.2
RTP1YMR185W EMC6Q12431 108 aa1.34□□□□□ -2.2
RTP1YMR185W YGR039WP53225 103 aa1.33□□□□□ -2.2
RTP1YMR185W VPS13Q07878 3144 aa1.33□□□□□ -2.2
RTP1YMR185W YBR126W-AQ8TGU7 68 aa1.33□□□□□ -2.2
RTP1YMR185W TOS8P53147 276 aa1.33□□□□□ -2.2
RTP1YMR185W YMR295CQ03559 197 aa1.33□□□□□ -2.2
RTP1YMR185W ICY1Q04329 127 aa1.33□□□□□ -2.2
RTP1YMR185W PBA1Q05778 276 aa1.33□□□□□ -2.2
RTP1YMR185W RDS3Q06835 107 aaPredicted RBP1.33□□□□□ -2.2
RTP1YMR185W YOR011W-AQ3E807 68 aa1.33□□□□□ -2.2
RTP1YMR185W RPL2AP0CX45 254 aaKnown RBP1.33□□□□□ -2.2
RTP1YMR185W RPL2BP0CX46 254 aaKnown RBP1.33□□□□□ -2.2
RTP1YMR185W RSM19P53733 91 aaPredicted RBP1.33□□□□□ -2.2
RTP1YMR185W ERI1P62651 68 aaKnown RBP1.33□□□□□ -2.2
RTP1YMR185W IRC21Q04772 201 aa1.33□□□□□ -2.2
RTP1YMR185W YGR240C-AQ3E786 66 aa1.33□□□□□ -2.2
RTP1YMR185W YER145C-AA0A023PYF4 145 aa1.32□□□□□ -2.2
RTP1YMR185W RPL15AP05748 204 aaKnown RBP1.32□□□□□ -2.2
RTP1YMR185W KRE9P39005 276 aa1.32□□□□□ -2.2
RTP1YMR185W ERG28P40030 148 aa1.32□□□□□ -2.2
RTP1YMR185W YIL059CP40520 121 aa1.32□□□□□ -2.2
RTP1YMR185W KNH1P50112 268 aa1.32□□□□□ -2.2
RTP1YMR185W VAM10Q08474 114 aa1.32□□□□□ -2.2
RTP1YMR185W YLL006W-AQ3E814 58 aa1.32□□□□□ -2.2
RTP1YMR185W YMR122W-AQ3E842 84 aa1.32□□□□□ -2.2
RTP1YMR185W YAL065CO13511 128 aa1.32□□□□□ -2.2
RTP1YMR185W RPS28BP0C0X0 67 aaKnown RBP1.32□□□□□ -2.2
RTP1YMR185W YER039C-AP0CD97 72 aa1.32□□□□□ -2.2
RTP1YMR185W YJR107C-AP0CT86 78 aa1.32□□□□□ -2.2
RTP1YMR185W YGR164WP53291 111 aa1.32□□□□□ -2.2
RTP1YMR185W ATP18P81450 59 aa1.32□□□□□ -2.2
RTP1YMR185W YDR246W-AQ3E763 66 aa1.32□□□□□ -2.2
RTP1YMR185W YMR175W-AQ3E766 64 aa1.32□□□□□ -2.2
RTP1YMR185W RPS28AQ3E7X9 67 aaPredicted RBP1.32□□□□□ -2.2
RTP1YMR185W KTI11Q3E840 82 aa1.32□□□□□ -2.2
RTP1YMR185W SPS100P13130 326 aa1.31□□□□□ -2.2
RTP1YMR185W YBR219CP38317 127 aa1.31□□□□□ -2.2
RTP1YMR185W YHL018WP38744 120 aaPredicted RBP1.31□□□□□ -2.2
RTP1YMR185W YFR035CP43608 114 aa1.31□□□□□ -2.2
RTP1YMR185W SBH1P52870 82 aa1.31□□□□□ -2.2
RTP1YMR185W ALG13P53178 202 aa1.31□□□□□ -2.2
RTP1YMR185W YDR029WQ12111 104 aa1.31□□□□□ -2.2
RTP1YMR185W YLR412C-AQ3E742 68 aa1.31□□□□□ -2.2
RTP1YMR185W YBL112CQ3E7Y4 105 aa1.31□□□□□ -2.2
RTP1YMR185W HFA1P32874 2273 aa1.31□□□□□ -2.2
RTP1YMR185W CSF1Q12150 2958 aa1.31□□□□□ -2.2
RTP1YMR185W YBR209WP38311 105 aa1.31□□□□□ -2.2
RTP1YMR185W SFT1P43682 97 aa1.31□□□□□ -2.2
RTP1YMR185W YGL260WP53056 76 aa1.31□□□□□ -2.2
RTP1YMR185W YPS5P53057 165 aa1.31□□□□□ -2.2
RTP1YMR185W SRL1Q08673 210 aa1.31□□□□□ -2.2
RTP1YMR185W YDR182W-AQ3E796 67 aa1.31□□□□□ -2.2
RTP1YMR185W YPR010C-AA5Z2X5 72 aa1.3□□□□□ -2.2
RTP1YMR185W YBR121C-AP0C5L4 52 aa1.3□□□□□ -2.2
RTP1YMR185W YER187WP40102 141 aa1.3□□□□□ -2.2
RTP1YMR185W RPC10P40422 70 aa1.3□□□□□ -2.2
RTP1YMR185W YKL183C-AQ3E765 70 aa1.3□□□□□ -2.2
RTP1YMR185W TAR1Q8TGM6 124 aa1.3□□□□□ -2.2
RTP1YMR185W YCR050CP25630 102 aa1.3□□□□□ -2.2
RTP1YMR185W YRA2P36036 203 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
RTP1YMR185W TMC1Q08422 150 aaPredicted RBP1.3□□□□□ -2.2
RTP1YMR185W Q0297Q9ZZV8 51 aa1.3□□□□□ -2.2
RTP1YMR185W UBC4P15731 148 aa1.29□□□□□ -2.2
RTP1YMR185W YGL088WP53151 121 aa1.29□□□□□ -2.2
RTP1YMR185W HAL1Q01766 294 aa1.29□□□□□ -2.2
RTP1YMR185W YFR009W-AP0C5M9 85 aa1.29□□□□□ -2.2
RTP1YMR185W YLR156WP0CE96 114 aa1.29□□□□□ -2.2
RTP1YMR185W YLR159WP0CE97 114 aa1.29□□□□□ -2.2
RTP1YMR185W YLR161WP0CE98 114 aa1.29□□□□□ -2.2
RTP1YMR185W MPC3P53311 146 aa1.29□□□□□ -2.2
RTP1YMR185W ATP20Q12233 115 aa1.29□□□□□ -2.2
RTP1YMR185W YLR285C-AQ3E771 56 aa1.29□□□□□ -2.2
RTP1YMR185W TSC3Q3E790 80 aa1.29□□□□□ -2.2
RTP1YMR185W RPL26AP05743 127 aaKnown RBP1.29□□□□□ -2.2
RTP1YMR185W AIM4P38305 123 aaPredicted RBP1.29□□□□□ -2.2
RTP1YMR185W YFL019CP43576 117 aa1.29□□□□□ -2.2
RTP1YMR185W RPL26BP53221 127 aaKnown RBP1.29□□□□□ -2.2
RTP1YMR185W TIM10P87108 93 aa1.29□□□□□ -2.2
RTP1YMR185W YMR320WQ04897 101 aa1.29□□□□□ -2.2
RTP1YMR185W CRC1Q12289 327 aa1.29□□□□□ -2.2
RTP1YMR185W YOR034C-AQ3E735 80 aa1.29□□□□□ -2.2
RTP1YMR185W RPL33AP05744 107 aaKnown RBP1.28□□□□□ -2.2
RTP1YMR185W YBL039W-BP0C268 59 aa1.28□□□□□ -2.2
RTP1YMR185W COX23P38824 151 aa1.28□□□□□ -2.2
RTP1YMR185W RPL33BP41056 107 aaKnown RBP1.28□□□□□ -2.2
RTP1YMR185W MVB12P42939 101 aa1.28□□□□□ -2.2
RTP1YMR185W YOR314WQ12506 109 aa1.28□□□□□ -2.2
RTP1YMR185W YLR307C-AQ3E825 87 aa1.28□□□□□ -2.2
RTP1YMR185W TAO3P40468 2376 aa1.28□□□□□ -2.2
RTP1YMR185W RPL36BO14455 100 aaKnown RBP1.28□□□□□ -2.2
RTP1YMR185W RPL36AP05745 100 aaPredicted RBP1.28□□□□□ -2.2
RTP1YMR185W YBR144CP34215 104 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms