RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	YGL194C-A	Q2V2P6	80 aa		0.77	□□□□□ -2.29
PKR1	YMR123W	RPS22A	P0C0W1	130 aa	Known RBP	0.76	□□□□□ -2.29
PKR1	YMR123W	PAU1	P0CE88	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	PAU14	P0CE89	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	PAU6	P0CE90	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	PAU18	P0CE91	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	PAU8	P0CE92	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	PAU11	P0CE93	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	PAU13	P38725	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	YHL042W	P38729	150 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	YHR140W	P38842	239 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	RPB11	P38902	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	GCV3	P39726	170 aa	Predicted RBP	0.76	□□□□□ -2.29
PKR1	YMR123W	CYB5	P40312	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	RPC10	P40422	70 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	DCV1	P43595	202 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	RPL37B	P51402	88 aa	Known RBP	0.76	□□□□□ -2.29
PKR1	YMR123W	JAC1	P53193	184 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	PAU4	P53427	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	ATP19	P81451	68 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	YCL001W-A	P87012	153 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	CWC27	Q02770	301 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	PAU10	Q03050	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	PAU20	Q08322	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	PAU9	Q3E770	120 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	YCL001W-B	Q96VH2	84 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	ENV10	Q99382	181 aa		0.76	□□□□□ -2.29
PKR1	YMR123W	UBC4	P15731	148 aa		0.75	□□□□□ -2.29
PKR1	YMR123W	VMA7	P39111	118 aa		0.75	□□□□□ -2.29
PKR1	YMR123W	SEC72	P39742	193 aa	Known RBP	0.75	□□□□□ -2.29
PKR1	YMR123W	MOG1	P47123	218 aa		0.75	□□□□□ -2.29
PKR1	YMR123W	GIM5	Q04493	163 aa		0.75	□□□□□ -2.29
PKR1	YMR123W	ATP20	Q12233	115 aa		0.75	□□□□□ -2.29
PKR1	YMR123W	COX19	Q3E731	98 aa		0.75	□□□□□ -2.29
PKR1	YMR123W	YGL041C-B	Q3E750	60 aa		0.75	□□□□□ -2.29
PKR1	YMR123W	YMR175W-A	Q3E766	64 aa		0.75	□□□□□ -2.29
PKR1	YMR123W	CMC4	Q3E7A9	73 aa		0.75	□□□□□ -2.29
PKR1	YMR123W	COA3	Q3E7B2	85 aa		0.75	□□□□□ -2.29
PKR1	YMR123W	Q0032	Q9ZZX7	96 aa		0.75	□□□□□ -2.29
PKR1	YMR123W	SRP21	P32342	167 aa		0.74	□□□□□ -2.29
PKR1	YMR123W	SHG1	P38337	142 aa		0.74	□□□□□ -2.29
PKR1	YMR123W	SRP14	P38985	146 aa		0.74	□□□□□ -2.29
PKR1	YMR123W	PAU7	P39545	55 aa		0.74	□□□□□ -2.29
PKR1	YMR123W	YAR029W	P39549	74 aa		0.74	□□□□□ -2.29
PKR1	YMR123W	PAU5	P43575	122 aa		0.74	□□□□□ -2.29
PKR1	YMR123W	YLR118C	Q12354	227 aa		0.74	□□□□□ -2.29
PKR1	YMR123W	KTI11	Q3E840	82 aa		0.74	□□□□□ -2.29
PKR1	YMR123W	YAL065C	O13511	128 aa		0.73	□□□□□ -2.29
PKR1	YMR123W	YKR070W	P36151	352 aa	Known RBP	0.73	□□□□□ -2.29
PKR1	YMR123W	SBH1	P52870	82 aa		0.73	□□□□□ -2.29
PKR1	YMR123W	WIP1	Q2V2P8	89 aa		0.73	□□□□□ -2.29
PKR1	YMR123W	FMP49	A0A023PZB3	126 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	YBL039W-B	P0C268	59 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	PAU19	P0CE85	124 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	PAU21	P0CE86	164 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	PAU22	P0CE87	164 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	HMRA1	P0CY11	126 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	PAU3	P25610	124 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	GSP2	P32836	220 aa	Known RBP	0.72	□□□□□ -2.29
PKR1	YMR123W	FYV4	P38783	130 aa	Predicted RBP	0.72	□□□□□ -2.29
PKR1	YMR123W	PAU15	P40585	124 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	MVB12	P42939	101 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	YGL193C	P53097	103 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	YDR042C	Q03205	200 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	PLP1	Q04004	230 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	SHH4	Q06236	168 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	VMA9	Q3E7B6	73 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	YOR008C-A	Q3E7B9	74 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	YNR034W-A	Q3E841	98 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	YPR014C	Q6B0W2	109 aa		0.72	□□□□□ -2.29
PKR1	YMR123W	PFY1	P07274	126 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	YER039C-A	P0CD97	72 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	HMRA2	P0CY13	119 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	PRE1	P22141	198 aa	Known RBP	0.71	□□□□□ -2.3
PKR1	YMR123W	PAU16	P35994	123 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	PHS1	P40857	217 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	NSE4	P43124	402 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	SNN1	P48232	102 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	SPG1	P50088	95 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	APS2	Q00381	147 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	MGR2	Q02889	113 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	PKR1	Q03880	122 aa	Known RBP	0.71	□□□□□ -2.3
PKR1	YMR123W	YDL241W	Q07738	123 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	KSH1	Q8TGJ3	72 aa		0.71	□□□□□ -2.3
PKR1	YMR123W	MRPL24	P36525	258 aa	Predicted RBP	0.7	□□□□□ -2.3
PKR1	YMR123W	SHU1	P38751	150 aa		0.7	□□□□□ -2.3
PKR1	YMR123W	TOS6	P48560	102 aa		0.7	□□□□□ -2.3
PKR1	YMR123W	DDR2	P89113	61 aa		0.7	□□□□□ -2.3
PKR1	YMR123W	YIL014C-A	Q02598	104 aa		0.7	□□□□□ -2.3
PKR1	YMR123W	YLR412C-A	Q3E742	68 aa		0.7	□□□□□ -2.3
PKR1	YMR123W	CMC2	Q3E7A4	109 aa		0.7	□□□□□ -2.3
PKR1	YMR123W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.7	□□□□□ -2.3
PKR1	YMR123W	NHP6A	P11632	93 aa	Known RBP	0.69	□□□□□ -2.3
PKR1	YMR123W	HAP3	P13434	144 aa		0.69	□□□□□ -2.3
PKR1	YMR123W	UGX2	P32772	223 aa		0.69	□□□□□ -2.3
PKR1	YMR123W	MRPL11	P36521	249 aa	Predicted RBP	0.69	□□□□□ -2.3
PKR1	YMR123W	HSP10	P38910	106 aa		0.69	□□□□□ -2.3
PKR1	YMR123W	ERV14	P53173	138 aa		0.69	□□□□□ -2.3
PKR1	YMR123W	YML079W	Q03629	201 aa		0.69	□□□□□ -2.3
PKR1	YMR123W	YKL023C-A	Q2V2P3	75 aa		0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms