RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C YAL064WP39711 94 aa5.62□□□□□ -1.51
AFG2YLR397C RPL26BP53221 127 aaKnown RBP5.62□□□□□ -1.51
AFG2YLR397C YGR018CP53211 109 aa5.61□□□□□ -1.51
AFG2YLR397C ARF1P11076 181 aaKnown RBP5.6□□□□□ -1.51
AFG2YLR397C TOS6P48560 102 aa5.6□□□□□ -1.51
AFG2YLR397C YMR254CQ04838 102 aa5.6□□□□□ -1.51
AFG2YLR397C NOP10Q6Q547 58 aaPredicted RBP5.6□□□□□ -1.51
AFG2YLR397C HHF1P02309 103 aaKnown RBP5.6□□□□□ -1.51
AFG2YLR397C TDA2P40045 126 aa5.59□□□□□ -1.51
AFG2YLR397C SED1Q01589 338 aa5.59□□□□□ -1.51
AFG2YLR397C CRC1Q12289 327 aa5.59□□□□□ -1.51
AFG2YLR397C SHU1P38751 150 aa5.59□□□□□ -1.51
AFG2YLR397C YLR162WQ06235 118 aa5.59□□□□□ -1.51
AFG2YLR397C YOL160WQ08321 113 aa5.58□□□□□ -1.52
AFG2YLR397C YAL065CO13511 128 aa5.58□□□□□ -1.52
AFG2YLR397C RPS27AP35997 82 aaKnown RBP5.58□□□□□ -1.52
AFG2YLR397C YBL071CP38185 102 aa5.58□□□□□ -1.52
AFG2YLR397C RPS27BP38711 82 aa5.58□□□□□ -1.52
AFG2YLR397C YDL009CQ12210 107 aa5.58□□□□□ -1.52
AFG2YLR397C YML100W-AQ8TGT0 57 aa5.58□□□□□ -1.52
AFG2YLR397C TRS23Q03784 219 aa5.57□□□□□ -1.52
AFG2YLR397C IRC21Q04772 201 aa5.57□□□□□ -1.52
AFG2YLR397C SRL1Q08673 210 aa5.57□□□□□ -1.52
AFG2YLR397C FAB1P34756 2278 aa5.57□□□□□ -1.52
AFG2YLR397C REE1P40893 198 aa5.56□□□□□ -1.52
AFG2YLR397C GLT1Q12680 2145 aaKnown RBP5.56□□□□□ -1.52
AFG2YLR397C YOR008C-AQ3E7B9 74 aa5.56□□□□□ -1.52
AFG2YLR397C RTG1P32607 177 aa5.56□□□□□ -1.52
AFG2YLR397C YMR122CQ03879 124 aa5.56□□□□□ -1.52
AFG2YLR397C YSF3P0C074 85 aaPredicted RBP5.55□□□□□ -1.52
AFG2YLR397C YFL015CP43578 164 aa5.54□□□□□ -1.52
AFG2YLR397C RPL38P49167 78 aaKnown RBP5.54□□□□□ -1.52
AFG2YLR397C HOT13P36078 116 aa5.54□□□□□ -1.52
AFG2YLR397C YHL005CP38752 130 aa5.54□□□□□ -1.52
AFG2YLR397C COX17Q12287 69 aa5.54□□□□□ -1.52
AFG2YLR397C YOR314WQ12506 109 aa5.54□□□□□ -1.52
AFG2YLR397C YGR035W-AQ45U48 73 aa5.54□□□□□ -1.52
AFG2YLR397C DDR48P18899 430 aaKnown RBP5.53□□□□□ -1.52
AFG2YLR397C TSC3Q3E790 80 aa5.53□□□□□ -1.52
AFG2YLR397C CCW14O13547 238 aa5.52□□□□□ -1.53
AFG2YLR397C SAP30P38429 201 aa5.52□□□□□ -1.53
AFG2YLR397C YGL088WP53151 121 aa5.52□□□□□ -1.53
AFG2YLR397C YGR025WP53216 100 aa5.52□□□□□ -1.53
AFG2YLR397C YER188C-AP0C0V2 99 aa5.52□□□□□ -1.53
AFG2YLR397C YER135CP40082 130 aa5.52□□□□□ -1.53
AFG2YLR397C ARC15P40518 154 aaRIP-Chip data5.52□□□□□ -1.53not detected
AFG2YLR397C YPR153WQ06537 140 aa5.52□□□□□ -1.53
AFG2YLR397C VPS13Q07878 3144 aa5.51□□□□□ -1.53
AFG2YLR397C RPS30AP0CX33 63 aaKnown RBP5.51□□□□□ -1.53
AFG2YLR397C RPS30BP0CX34 63 aaKnown RBP5.51□□□□□ -1.53
AFG2YLR397C YBR144CP34215 104 aa5.51□□□□□ -1.53
AFG2YLR397C YOR032W-AQ8TGS1 66 aa5.51□□□□□ -1.53
AFG2YLR397C OST5Q92316 86 aa5.51□□□□□ -1.53
AFG2YLR397C YJR107C-AP0CT86 78 aa5.49□□□□□ -1.53
AFG2YLR397C URM1P40554 99 aaPredicted RBP5.49□□□□□ -1.53
AFG2YLR397C YIR020CP40575 100 aa5.49□□□□□ -1.53
AFG2YLR397C SPG4Q04438 115 aa5.49□□□□□ -1.53
AFG2YLR397C YOL166W-AQ8TGJ1 51 aa5.49□□□□□ -1.53
AFG2YLR397C RPS23AP0CX29 145 aaKnown RBP5.49□□□□□ -1.53
AFG2YLR397C RPS23BP0CX30 145 aa5.49□□□□□ -1.53
AFG2YLR397C YLR342W-AQ3E810 57 aa5.49□□□□□ -1.53
AFG2YLR397C YOR020W-AQ3E824 90 aa5.49□□□□□ -1.53
AFG2YLR397C YOL085CQ99345 113 aa5.49□□□□□ -1.53
AFG2YLR397C RPR2P40571 144 aa5.47□□□□□ -1.53
AFG2YLR397C MPC3P53311 146 aa5.47□□□□□ -1.53
AFG2YLR397C YJL027CP47063 138 aaPredicted RBP5.47□□□□□ -1.53
AFG2YLR397C YGL193CP53097 103 aa5.47□□□□□ -1.53
AFG2YLR397C YER145C-AA0A023PYF4 145 aa5.46□□□□□ -1.54
AFG2YLR397C YJR146WP47174 117 aa5.46□□□□□ -1.54
AFG2YLR397C RGM1Q00453 211 aa5.45□□□□□ -1.54
AFG2YLR397C RNH203Q12338 110 aa5.45□□□□□ -1.54
AFG2YLR397C YIL156W-BQ2V2P4 73 aa5.44□□□□□ -1.54
AFG2YLR397C RPL36BO14455 100 aaKnown RBP5.43□□□□□ -1.54
AFG2YLR397C RPL36AP05745 100 aaPredicted RBP5.43□□□□□ -1.54
AFG2YLR397C YDR010CQ12426 110 aa5.43□□□□□ -1.54
AFG2YLR397C FYV5P25585 152 aa5.43□□□□□ -1.54
AFG2YLR397C YHL037CP38733 133 aa5.43□□□□□ -1.54
AFG2YLR397C SPC1P46965 94 aa5.41□□□□□ -1.54
AFG2YLR397C RPB10P22139 70 aa5.4□□□□□ -1.54
AFG2YLR397C RRT1P38192 103 aa5.4□□□□□ -1.55
AFG2YLR397C ATP18P81450 59 aa5.39□□□□□ -1.55
AFG2YLR397C YLR236CA0A023PZG4 107 aa5.39□□□□□ -1.55
AFG2YLR397C YFR009W-AP0C5M9 85 aa5.38□□□□□ -1.55
AFG2YLR397C YPS5P53057 165 aa5.38□□□□□ -1.55
AFG2YLR397C YPR013CQ12145 317 aa5.38□□□□□ -1.55
AFG2YLR397C YEL008WP40001 126 aa5.37□□□□□ -1.55
AFG2YLR397C POR2P40478 281 aa5.37□□□□□ -1.55
AFG2YLR397C YIL102CP40488 101 aa5.36□□□□□ -1.55
AFG2YLR397C YOL014WQ08110 124 aa5.36□□□□□ -1.55
AFG2YLR397C YDR182W-AQ3E796 67 aa5.36□□□□□ -1.55
AFG2YLR397C YKL065W-AQ2V2P2 73 aa5.36□□□□□ -1.55
AFG2YLR397C UTH1P36135 365 aa5.35□□□□□ -1.55
AFG2YLR397C LIP1Q03579 150 aa5.34□□□□□ -1.56
AFG2YLR397C QCR8P08525 94 aa5.33□□□□□ -1.56
AFG2YLR397C YBR200W-AQ3E755 54 aa5.32□□□□□ -1.56
AFG2YLR397C WWM1P43582 211 aaKnown RBP5.31□□□□□ -1.56
AFG2YLR397C YKL097CP34245 136 aa5.31□□□□□ -1.56
AFG2YLR397C MRPL38P35996 138 aaPredicted RBP5.31□□□□□ -1.56
AFG2YLR397C YER084WP40057 128 aa5.31□□□□□ -1.56
AFG2YLR397C YMR244WQ04018 355 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms