RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W IRC23Q08416 157 aa1.29□□□□□ -2.2
VPS38YLR360W YHR214C-EQ8TGK0 99 aa1.29□□□□□ -2.2
VPS38YLR360W RPS22AP0C0W1 130 aaKnown RBP1.28□□□□□ -2.2
VPS38YLR360W MRPL31P14063 131 aaPredicted RBP1.28□□□□□ -2.2
VPS38YLR360W TIM12P32830 109 aa1.28□□□□□ -2.2
VPS38YLR360W SRX1P36077 127 aa1.28□□□□□ -2.2
VPS38YLR360W YIL163CP40448 117 aa1.28□□□□□ -2.2
VPS38YLR360W ICS3P47034 131 aa1.28□□□□□ -2.2
VPS38YLR360W TDA4P47153 279 aa1.28□□□□□ -2.2
VPS38YLR360W YGL193CP53097 103 aa1.28□□□□□ -2.2
VPS38YLR360W PIR1Q03178 341 aa1.28□□□□□ -2.2
VPS38YLR360W ICY1Q04329 127 aa1.28□□□□□ -2.2
VPS38YLR360W ACC1Q00955 2233 aaKnown RBP1.28□□□□□ -2.2
VPS38YLR360W MDM35O60200 86 aa1.27□□□□□ -2.21
VPS38YLR360W YHR214C-DP0CX93 97 aa1.27□□□□□ -2.21
VPS38YLR360W ROX3P25046 220 aa1.27□□□□□ -2.21
VPS38YLR360W FPR2P32472 135 aa1.27□□□□□ -2.21
VPS38YLR360W APS1P35181 156 aa1.27□□□□□ -2.21
VPS38YLR360W YKL044WP36092 106 aa1.27□□□□□ -2.21
VPS38YLR360W YHR173CP38864 112 aa1.27□□□□□ -2.21
VPS38YLR360W YER187WP40102 141 aa1.27□□□□□ -2.21
VPS38YLR360W LST8P41318 303 aa1.27□□□□□ -2.21
VPS38YLR360W YDR274CP87283 123 aa1.27□□□□□ -2.21
VPS38YLR360W YMR007WQ03675 126 aa1.27□□□□□ -2.21
VPS38YLR360W PFY1P07274 126 aa1.26□□□□□ -2.21
VPS38YLR360W YDL022C-AP0C5L6 82 aa1.26□□□□□ -2.21
VPS38YLR360W HSP12P22943 109 aaKnown RBP1.26□□□□□ -2.21
VPS38YLR360W YBR209WP38311 105 aa1.26□□□□□ -2.21
VPS38YLR360W YSY6P38374 65 aa1.26□□□□□ -2.21
VPS38YLR360W YAL064WP39711 94 aa1.26□□□□□ -2.21
VPS38YLR360W RSM18P40033 138 aa1.26□□□□□ -2.21
VPS38YLR360W YGR269WP40326 108 aa1.26□□□□□ -2.21
VPS38YLR360W MET31Q03081 177 aa1.26□□□□□ -2.21
VPS38YLR360W YDR102CQ03864 110 aa1.26□□□□□ -2.21
VPS38YLR360W YGR121W-AQ3E816 71 aa1.26□□□□□ -2.21
VPS38YLR360W YLR365WQ7LIF2 110 aa1.26□□□□□ -2.21
VPS38YLR360W YML100W-AQ8TGT0 57 aa1.26□□□□□ -2.21
VPS38YLR360W DDR48P18899 430 aaKnown RBP1.25□□□□□ -2.21
VPS38YLR360W FYV5P25585 152 aa1.25□□□□□ -2.21
VPS38YLR360W YFL051CP43552 160 aa1.25□□□□□ -2.21
VPS38YLR360W HUR1P45820 110 aa1.25□□□□□ -2.21
VPS38YLR360W ERI1P62651 68 aaKnown RBP1.25□□□□□ -2.21
VPS38YLR360W YMR295CQ03559 197 aa1.25□□□□□ -2.21
VPS38YLR360W YPL261CQ08976 102 aa1.25□□□□□ -2.21
VPS38YLR360W YOR192C-CQ3E736 78 aa1.25□□□□□ -2.21
VPS38YLR360W YAL065CO13511 128 aa1.24□□□□□ -2.21
VPS38YLR360W QCR9P22289 66 aa1.24□□□□□ -2.21
VPS38YLR360W AIM4P38305 123 aaPredicted RBP1.24□□□□□ -2.21
VPS38YLR360W YEL073CP39974 107 aa1.24□□□□□ -2.21
VPS38YLR360W TDA2P40045 126 aa1.24□□□□□ -2.21
VPS38YLR360W SPI1P40092 148 aa1.24□□□□□ -2.21
VPS38YLR360W IMP2P46972 177 aa1.24□□□□□ -2.21
VPS38YLR360W EDC1P53080 175 aaPredicted RBP1.24□□□□□ -2.21
VPS38YLR360W YGR050CP53231 118 aa1.24□□□□□ -2.21
VPS38YLR360W YOR314WQ12506 109 aa1.24□□□□□ -2.21
VPS38YLR360W YOR381W-AQ3E804 55 aa1.24□□□□□ -2.21
VPS38YLR360W YGR035W-AQ45U48 73 aa1.24□□□□□ -2.21
VPS38YLR360W YHL005CP38752 130 aa1.23□□□□□ -2.21
VPS38YLR360W MPC2P38857 129 aa1.23□□□□□ -2.21
VPS38YLR360W HUA1P40325 198 aa1.23□□□□□ -2.21
VPS38YLR360W AIM19P40502 157 aa1.23□□□□□ -2.21
VPS38YLR360W SED1Q01589 338 aa1.23□□□□□ -2.21
VPS38YLR360W YHP1Q04116 353 aa1.23□□□□□ -2.21
VPS38YLR360W FYV12Q08559 129 aa1.23□□□□□ -2.21
VPS38YLR360W YOR343CQ12484 108 aa1.23□□□□□ -2.21
VPS38YLR360W YFR032C-BQ8TGU2 87 aa1.23□□□□□ -2.21
VPS38YLR360W ATP19P81451 68 aa1.22□□□□□ -2.21
VPS38YLR360W YOL014WQ08110 124 aa1.22□□□□□ -2.21
VPS38YLR360W YOL118CQ08259 102 aa1.22□□□□□ -2.21
VPS38YLR360W ATP20Q12233 115 aa1.22□□□□□ -2.21
VPS38YLR360W HUG1Q6Q5K6 68 aa1.22□□□□□ -2.21
VPS38YLR360W HFA1P32874 2273 aa1.21□□□□□ -2.22
VPS38YLR360W YLR236CA0A023PZG4 107 aa1.21□□□□□ -2.22
VPS38YLR360W YER188C-AP0C0V2 99 aa1.21□□□□□ -2.22
VPS38YLR360W QCR10P37299 77 aa1.21□□□□□ -2.22
VPS38YLR360W YBL071CP38185 102 aa1.21□□□□□ -2.22
VPS38YLR360W DCV1P43595 202 aa1.21□□□□□ -2.22
VPS38YLR360W SPG1P50088 95 aa1.21□□□□□ -2.22
VPS38YLR360W YMR122CQ03879 124 aa1.21□□□□□ -2.22
VPS38YLR360W COA3Q3E7B2 85 aa1.21□□□□□ -2.22
VPS38YLR360W YPR108W-AQ3E7B3 70 aa1.21□□□□□ -2.22
VPS38YLR360W YNL146C-AQ3E7Z1 64 aa1.21□□□□□ -2.22
VPS38YLR360W URA2P07259 2214 aaKnown RBP1.21□□□□□ -2.22
VPS38YLR360W PAU7P39545 55 aa1.2□□□□□ -2.22
VPS38YLR360W MPC3P53311 146 aa1.2□□□□□ -2.22
VPS38YLR360W TOM7P53507 60 aa1.2□□□□□ -2.22
VPS38YLR360W MRPS12P53732 153 aa1.2□□□□□ -2.22
VPS38YLR360W YNL190WP53872 204 aa1.2□□□□□ -2.22
VPS38YLR360W MGR2Q02889 113 aa1.2□□□□□ -2.22
VPS38YLR360W YLR194CQ05777 254 aa1.2□□□□□ -2.22
VPS38YLR360W YPR153WQ06537 140 aa1.2□□□□□ -2.22
VPS38YLR360W YLR285C-AQ3E771 56 aa1.2□□□□□ -2.22
VPS38YLR360W YOL166W-AQ8TGJ1 51 aa1.2□□□□□ -2.22
VPS38YLR360W OST5Q92316 86 aa1.2□□□□□ -2.22
VPS38YLR360W NUM1Q00402 2748 aa1.2□□□□□ -2.22
VPS38YLR360W HMRA2P0CY13 119 aa1.19□□□□□ -2.22
VPS38YLR360W SHU1P38751 150 aa1.19□□□□□ -2.22
VPS38YLR360W YIR020CP40575 100 aa1.19□□□□□ -2.22
VPS38YLR360W SOM1Q05676 74 aa1.19□□□□□ -2.22
VPS38YLR360W IRC19Q07843 230 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms