RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W YDR119W-AQ2V2P9 66 aa2.57□□□□□ -2
LCB5YLR260W VMA9Q3E7B6 73 aa2.57□□□□□ -2
LCB5YLR260W ENV10Q99382 181 aa2.57□□□□□ -2
LCB5YLR260W MRP17P28778 131 aa2.57□□□□□ -2
LCB5YLR260W SVP26P38869 228 aa2.57□□□□□ -2
LCB5YLR260W VMA21P41806 77 aa2.57□□□□□ -2
LCB5YLR260W KRE1P17260 313 aa2.56□□□□□ -2
LCB5YLR260W ATX1P38636 73 aa2.56□□□□□ -2
LCB5YLR260W GCV3P39726 170 aaPredicted RBP2.56□□□□□ -2
LCB5YLR260W SOD1P00445 154 aaKnown RBP2.56□□□□□ -2
LCB5YLR260W AUA1P32450 94 aa2.56□□□□□ -2
LCB5YLR260W TDA2P40045 126 aa2.56□□□□□ -2
LCB5YLR260W YDR042CQ03205 200 aa2.56□□□□□ -2
LCB5YLR260W YHP1Q04116 353 aa2.56□□□□□ -2
LCB5YLR260W SOM1Q05676 74 aa2.56□□□□□ -2
LCB5YLR260W YDL241WQ07738 123 aa2.56□□□□□ -2
LCB5YLR260W DAD1Q12248 94 aa2.56□□□□□ -2
LCB5YLR260W YMR175W-AQ3E766 64 aa2.56□□□□□ -2
LCB5YLR260W YEL045CP32616 141 aa2.55□□□□□ -2
LCB5YLR260W MRPL38P35996 138 aaPredicted RBP2.55□□□□□ -2
LCB5YLR260W QCR10P37299 77 aa2.55□□□□□ -2
LCB5YLR260W NRG2P38082 220 aa2.55□□□□□ -2
LCB5YLR260W LST8P41318 303 aa2.55□□□□□ -2
LCB5YLR260W RSM19P53733 91 aaPredicted RBP2.55□□□□□ -2
LCB5YLR260W YOR268CQ08734 132 aa2.55□□□□□ -2
LCB5YLR260W YPR013CQ12145 317 aa2.55□□□□□ -2
LCB5YLR260W RPA12P32529 125 aaKnown RBP2.54□□□□□ -2
LCB5YLR260W YNR077CP53758 84 aa2.54□□□□□ -2
LCB5YLR260W ATP19P81451 68 aa2.54□□□□□ -2
LCB5YLR260W YLR296WQ05898 108 aa2.54□□□□□ -2
LCB5YLR260W PPT2Q12036 173 aa2.54□□□□□ -2
LCB5YLR260W YOR015WQ12169 119 aa2.54□□□□□ -2
LCB5YLR260W TAR1Q8TGM6 124 aa2.53□□□□□ -2
LCB5YLR260W FYV5P25585 152 aa2.53□□□□□ -2.01
LCB5YLR260W YKR032WP36127 104 aa2.53□□□□□ -2.01
LCB5YLR260W MRPS9P38120 278 aa2.53□□□□□ -2.01
LCB5YLR260W AVO2Q04749 426 aa2.53□□□□□ -2.01
LCB5YLR260W YDL157CQ12082 118 aa2.53□□□□□ -2.01
LCB5YLR260W EMC6Q12431 108 aa2.53□□□□□ -2.01
LCB5YLR260W YLR146W-AQ2V2P1 62 aa2.53□□□□□ -2.01
LCB5YLR260W YBR292CP38357 123 aa2.52□□□□□ -2.01
LCB5YLR260W KRE9P39005 276 aa2.52□□□□□ -2.01
LCB5YLR260W YHR213WP0CI67 198 aa2.51□□□□□ -2.01
LCB5YLR260W YEL067CP39978 195 aa2.51□□□□□ -2.01
LCB5YLR260W YGR025WP53216 100 aa2.51□□□□□ -2.01
LCB5YLR260W YGL258W-AQ3E740 77 aa2.51□□□□□ -2.01
LCB5YLR260W COA2Q3E823 68 aa2.51□□□□□ -2.01
LCB5YLR260W PAU21P0CE86 164 aa2.5□□□□□ -2.01
LCB5YLR260W PAU22P0CE87 164 aa2.5□□□□□ -2.01
LCB5YLR260W TOM6P33448 61 aa2.5□□□□□ -2.01
LCB5YLR260W YJL027CP47063 138 aaPredicted RBP2.5□□□□□ -2.01
LCB5YLR260W YLR363W-AQ3E747 85 aa2.5□□□□□ -2.01
LCB5YLR260W HUR1P45820 110 aa2.49□□□□□ -2.01
LCB5YLR260W YML079WQ03629 201 aa2.49□□□□□ -2.01
LCB5YLR260W ICY1Q04329 127 aa2.49□□□□□ -2.01
LCB5YLR260W YER187WP40102 141 aa2.49□□□□□ -2.01
LCB5YLR260W POP3P53833 195 aaPredicted RBP2.49□□□□□ -2.01
LCB5YLR260W COX19Q3E731 98 aa2.49□□□□□ -2.01
LCB5YLR260W PAU15P40585 124 aa2.48□□□□□ -2.01
LCB5YLR260W YLR236CA0A023PZG4 107 aa2.48□□□□□ -2.01
LCB5YLR260W MPC2P38857 129 aa2.48□□□□□ -2.01
LCB5YLR260W YGR269WP40326 108 aa2.48□□□□□ -2.01
LCB5YLR260W RPL33BP41056 107 aaKnown RBP2.48□□□□□ -2.01
LCB5YLR260W YPI1P43587 155 aa2.48□□□□□ -2.01
LCB5YLR260W MIC27P50945 234 aa2.48□□□□□ -2.01
LCB5YLR260W YIL102C-AQ2V2P5 75 aa2.48□□□□□ -2.01
LCB5YLR260W YFL041W-AQ3E817 63 aa2.48□□□□□ -2.01
LCB5YLR260W PAU19P0CE85 124 aa2.47□□□□□ -2.01
LCB5YLR260W PAU3P25610 124 aa2.47□□□□□ -2.01
LCB5YLR260W ICS3P47034 131 aa2.47□□□□□ -2.01
LCB5YLR260W YPR195CQ06594 109 aa2.47□□□□□ -2.01
LCB5YLR260W YPL261CQ08976 102 aa2.47□□□□□ -2.01
LCB5YLR260W YBL071CP38185 102 aa2.46□□□□□ -2.01
LCB5YLR260W HSP10P38910 106 aa2.46□□□□□ -2.01
LCB5YLR260W RDS3Q06835 107 aaPredicted RBP2.46□□□□□ -2.01
LCB5YLR260W NHP2P32495 156 aaPredicted RBP2.46□□□□□ -2.02
LCB5YLR260W DCV1P43595 202 aa2.46□□□□□ -2.02
LCB5YLR260W BRP1P53194 125 aa2.46□□□□□ -2.02
LCB5YLR260W YDR381C-AQ3E6R5 114 aa2.46□□□□□ -2.02
LCB5YLR260W RSM18P40033 138 aa2.45□□□□□ -2.02
LCB5YLR260W IMP2P46972 177 aa2.45□□□□□ -2.02
LCB5YLR260W YPR153WQ06537 140 aa2.45□□□□□ -2.02
LCB5YLR260W YPL038W-AQ3E7B4 63 aa2.45□□□□□ -2.02
LCB5YLR260W YOR011W-AQ3E807 68 aa2.45□□□□□ -2.02
LCB5YLR260W POR2P40478 281 aa2.45□□□□□ -2.02
LCB5YLR260W PAU5P43575 122 aa2.45□□□□□ -2.02
LCB5YLR260W YGL149WP53116 101 aa2.45□□□□□ -2.02
LCB5YLR260W PRM7Q12459 698 aa2.45□□□□□ -2.02
LCB5YLR260W LSM6Q06406 86 aaKnown RBP2.44□□□□□ -2.02
LCB5YLR260W OST5Q92316 86 aa2.44□□□□□ -2.02
LCB5YLR260W PAU4P53427 120 aa2.43□□□□□ -2.02
LCB5YLR260W COX12Q01519 83 aa2.43□□□□□ -2.02
LCB5YLR260W YMR007WQ03675 126 aa2.43□□□□□ -2.02
LCB5YLR260W YOR105WQ08504 108 aa2.43□□□□□ -2.02
LCB5YLR260W COX8P04039 78 aa2.43□□□□□ -2.02
LCB5YLR260W PAU1P0CE88 120 aa2.43□□□□□ -2.02
LCB5YLR260W PAU14P0CE89 120 aa2.43□□□□□ -2.02
LCB5YLR260W PAU6P0CE90 120 aa2.43□□□□□ -2.02
LCB5YLR260W PAU18P0CE91 120 aa2.43□□□□□ -2.02
LCB5YLR260W PAU8P0CE92 120 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms