RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W YIL086CP40503 102 aa4.04□□□□□ -1.76
PWP1YLR196W YGR045CP53229 120 aa4.04□□□□□ -1.76
PWP1YLR196W YLR162WQ06235 118 aa4.04□□□□□ -1.76
PWP1YLR196W YOL029CQ08187 201 aa4.04□□□□□ -1.76
PWP1YLR196W NCA3P46955 337 aa4.03□□□□□ -1.76
PWP1YLR196W YML122CQ03207 126 aa4.03□□□□□ -1.76
PWP1YLR196W TRS23Q03784 219 aa4.02□□□□□ -1.77
PWP1YLR196W YPR053CQ6Q5F3 151 aa4.02□□□□□ -1.77
PWP1YLR196W YIL046W-AQ3E7Z4 54 aa4.01□□□□□ -1.77
PWP1YLR196W YER175W-AQ8TGU4 54 aa4.01□□□□□ -1.77
PWP1YLR196W REE1P40893 198 aa4.01□□□□□ -1.77
PWP1YLR196W FYV12Q08559 129 aa4.01□□□□□ -1.77
PWP1YLR196W MPC2P38857 129 aa4□□□□□ -1.77
PWP1YLR196W YKL065W-AQ2V2P2 73 aa4□□□□□ -1.77
PWP1YLR196W YER188C-AP0C0V2 99 aa3.99□□□□□ -1.77
PWP1YLR196W QCR10P37299 77 aa3.99□□□□□ -1.77
PWP1YLR196W YHR022CP38763 256 aa3.99□□□□□ -1.77
PWP1YLR196W ATP19P81451 68 aa3.99□□□□□ -1.77
PWP1YLR196W HFA1P32874 2273 aa3.99□□□□□ -1.77
PWP1YLR196W YDL022C-AP0C5L6 82 aa3.98□□□□□ -1.77
PWP1YLR196W YCR043CP25361 127 aa3.98□□□□□ -1.77
PWP1YLR196W YKR073CP36153 106 aa3.98□□□□□ -1.77
PWP1YLR196W EDC2P40023 145 aaPredicted RBP3.98□□□□□ -1.77
PWP1YLR196W SED1Q01589 338 aa3.98□□□□□ -1.77
PWP1YLR196W YMR254CQ04838 102 aa3.98□□□□□ -1.77
PWP1YLR196W ATP20Q12233 115 aa3.98□□□□□ -1.77
PWP1YLR196W YGR035W-AQ45U48 73 aa3.98□□□□□ -1.77
PWP1YLR196W SEN1Q00416 2231 aaKnown RBP3.98□□□□□ -1.77
PWP1YLR196W CSF1Q12150 2958 aa3.98□□□□□ -1.77
PWP1YLR196W VTC1P40046 129 aaRIP-Chip data3.98□□□□□ -1.77not detected
PWP1YLR196W RGM1Q00453 211 aa3.98□□□□□ -1.77
PWP1YLR196W TIM22Q12328 207 aa3.98□□□□□ -1.77
PWP1YLR196W OST5Q92316 86 aa3.98□□□□□ -1.77
PWP1YLR196W AGA1P32323 725 aa3.97□□□□□ -1.77
PWP1YLR196W DCV1P43595 202 aa3.97□□□□□ -1.77
PWP1YLR196W MPC3P53311 146 aa3.97□□□□□ -1.77
PWP1YLR196W YMR122CQ03879 124 aa3.97□□□□□ -1.77
PWP1YLR196W HUA1P40325 198 aa3.96□□□□□ -1.78
PWP1YLR196W RPL26BP53221 127 aaKnown RBP3.96□□□□□ -1.78
PWP1YLR196W YLR285C-AQ3E771 56 aa3.96□□□□□ -1.78
PWP1YLR196W YBL008W-AQ3E821 79 aa3.96□□□□□ -1.78
PWP1YLR196W IRA2P19158 3079 aa3.96□□□□□ -1.78
PWP1YLR196W YLR156WP0CE96 114 aa3.95□□□□□ -1.78
PWP1YLR196W YLR159WP0CE97 114 aa3.95□□□□□ -1.78
PWP1YLR196W YLR161WP0CE98 114 aa3.95□□□□□ -1.78
PWP1YLR196W API2Q04413 109 aa3.95□□□□□ -1.78
PWP1YLR196W UTH1P36135 365 aa3.95□□□□□ -1.78
PWP1YLR196W MSA2P36157 363 aa3.95□□□□□ -1.78
PWP1YLR196W PAU7P39545 55 aa3.95□□□□□ -1.78
PWP1YLR196W EDC1P53080 175 aaPredicted RBP3.95□□□□□ -1.78
PWP1YLR196W YDR114CQ04597 100 aa3.95□□□□□ -1.78
PWP1YLR196W RPS23AP0CX29 145 aaKnown RBP3.94□□□□□ -1.78
PWP1YLR196W RPS23BP0CX30 145 aa3.94□□□□□ -1.78
PWP1YLR196W SOM1Q05676 74 aa3.94□□□□□ -1.78
PWP1YLR196W RPR2P40571 144 aa3.93□□□□□ -1.78
PWP1YLR196W LIP1Q03579 150 aa3.93□□□□□ -1.78
PWP1YLR196W SRL1Q08673 210 aa3.93□□□□□ -1.78
PWP1YLR196W YBL071CP38185 102 aa3.92□□□□□ -1.78
PWP1YLR196W TOM7P53507 60 aa3.92□□□□□ -1.78
PWP1YLR196W YPR153WQ06537 140 aa3.92□□□□□ -1.78
PWP1YLR196W YGL258W-AQ3E740 77 aa3.92□□□□□ -1.78
PWP1YLR196W YDR182W-AQ3E796 67 aa3.92□□□□□ -1.78
PWP1YLR196W ATP15P21306 62 aa3.92□□□□□ -1.78
PWP1YLR196W YIR020CP40575 100 aa3.92□□□□□ -1.78
PWP1YLR196W YDR034W-BQ6Q5X2 51 aa3.92□□□□□ -1.78
PWP1YLR196W YAR023CD6VPM8 179 aa3.91□□□□□ -1.78
PWP1YLR196W RPL36BO14455 100 aaKnown RBP3.91□□□□□ -1.78
PWP1YLR196W RPL36AP05745 100 aaPredicted RBP3.91□□□□□ -1.78
PWP1YLR196W YKR032WP36127 104 aa3.91□□□□□ -1.78
PWP1YLR196W RRT1P38192 103 aa3.91□□□□□ -1.78
PWP1YLR196W YER084WP40057 128 aa3.91□□□□□ -1.78
PWP1YLR196W TMC1Q08422 150 aaPredicted RBP3.91□□□□□ -1.78
PWP1YLR196W FIT2Q08906 153 aa3.91□□□□□ -1.78
PWP1YLR196W YHL037CP38733 133 aa3.9□□□□□ -1.78
PWP1YLR196W MGR2Q02889 113 aa3.9□□□□□ -1.78
PWP1YLR196W YLR194CQ05777 254 aa3.9□□□□□ -1.78
PWP1YLR196W YCR041WP37265 110 aa3.9□□□□□ -1.79
PWP1YLR196W COA3Q3E7B2 85 aa3.9□□□□□ -1.79
PWP1YLR196W YOR020W-AQ3E824 90 aa3.9□□□□□ -1.79
PWP1YLR196W YER145C-AA0A023PYF4 145 aa3.88□□□□□ -1.79
PWP1YLR196W YFL015CP43578 164 aa3.88□□□□□ -1.79
PWP1YLR196W MRPS8Q03799 155 aa3.88□□□□□ -1.79
PWP1YLR196W YPL278CQ08990 100 aa3.88□□□□□ -1.79
PWP1YLR196W NOP10Q6Q547 58 aaPredicted RBP3.88□□□□□ -1.79
PWP1YLR196W YOL166W-AQ8TGJ1 51 aa3.88□□□□□ -1.79
PWP1YLR196W YOR032W-AQ8TGS1 66 aa3.88□□□□□ -1.79
PWP1YLR196W FMP27Q06179 2628 aa3.88□□□□□ -1.79
PWP1YLR196W MRP10O75012 95 aa3.87□□□□□ -1.79
PWP1YLR196W YCR022CP25620 114 aa3.87□□□□□ -1.79
PWP1YLR196W HMRA2P0CY13 119 aa3.86□□□□□ -1.79
PWP1YLR196W MRPL38P35996 138 aaPredicted RBP3.86□□□□□ -1.79
PWP1YLR196W YMR141CP40211 102 aa3.86□□□□□ -1.79
PWP1YLR196W SIP18P50263 79 aa3.86□□□□□ -1.79
PWP1YLR196W IRC21Q04772 201 aa3.86□□□□□ -1.79
PWP1YLR196W YJL197C-AP0C5P0 93 aa3.85□□□□□ -1.79
PWP1YLR196W RPS30AP0CX33 63 aaKnown RBP3.84□□□□□ -1.79
PWP1YLR196W RPS30BP0CX34 63 aaKnown RBP3.84□□□□□ -1.79
PWP1YLR196W SHU1P38751 150 aa3.84□□□□□ -1.79
PWP1YLR196W DAD4P69851 72 aa3.84□□□□□ -1.79
PWP1YLR196W IRA1P18963 3092 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms