RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	TVP18	Q04767	167 aa		0.79	□□□□□ -2.28
RIC1	YLR039C	FMP49	A0A023PZB3	126 aa		0.79	□□□□□ -2.28
RIC1	YLR039C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.79	□□□□□ -2.28
RIC1	YLR039C	YER039C-A	P0CD97	72 aa		0.79	□□□□□ -2.28
RIC1	YLR039C	EMC5	P40540	141 aa		0.79	□□□□□ -2.28
RIC1	YLR039C	LSM8	P47093	109 aa	Known RBP	0.79	□□□□□ -2.28
RIC1	YLR039C	YMR007W	Q03675	126 aa		0.79	□□□□□ -2.28
RIC1	YLR039C	LST8	P41318	303 aa		0.78	□□□□□ -2.28
RIC1	YLR039C	YNL277W-A	Q3E7Z0	62 aa		0.78	□□□□□ -2.28
RIC1	YLR039C	RTC6	O14464	93 aa		0.78	□□□□□ -2.28
RIC1	YLR039C	HMRA1	P0CY11	126 aa		0.78	□□□□□ -2.28
RIC1	YLR039C	SFT1	P43682	97 aa		0.78	□□□□□ -2.28
RIC1	YLR039C	YLR194C	Q05777	254 aa		0.78	□□□□□ -2.28
RIC1	YLR039C	HMRA2	P0CY13	119 aa		0.78	□□□□□ -2.29
RIC1	YLR039C	FUN14	P18411	198 aa		0.78	□□□□□ -2.29
RIC1	YLR039C	YCR001W	P25347	104 aa		0.78	□□□□□ -2.29
RIC1	YLR039C	MRPL38	P35996	138 aa	Predicted RBP	0.78	□□□□□ -2.29
RIC1	YLR039C	QCR10	P37299	77 aa		0.78	□□□□□ -2.29
RIC1	YLR039C	ELC1	Q03071	99 aa		0.78	□□□□□ -2.29
RIC1	YLR039C	YMR175W-A	Q3E766	64 aa		0.78	□□□□□ -2.29
RIC1	YLR039C	YMR122W-A	Q3E842	84 aa		0.78	□□□□□ -2.29
RIC1	YLR039C	SUS1	Q6WNK7	96 aa		0.78	□□□□□ -2.29
RIC1	YLR039C	YHR213W	P0CI67	198 aa		0.77	□□□□□ -2.29
RIC1	YLR039C	NHP2	P32495	156 aa	Predicted RBP	0.77	□□□□□ -2.29
RIC1	YLR039C	YHR173C	P38864	112 aa		0.77	□□□□□ -2.29
RIC1	YLR039C	PAM16	P42949	149 aa		0.77	□□□□□ -2.29
RIC1	YLR039C	SPG1	P50088	95 aa		0.77	□□□□□ -2.29
RIC1	YLR039C	YNL190W	P53872	204 aa		0.77	□□□□□ -2.29
RIC1	YLR039C	LCL1	Q02786	101 aa		0.77	□□□□□ -2.29
RIC1	YLR039C	YGL041C-B	Q3E750	60 aa		0.77	□□□□□ -2.29
RIC1	YLR039C	RPL39	P04650	51 aa		0.77	□□□□□ -2.29
RIC1	YLR039C	SFT2	P38166	215 aa		0.77	□□□□□ -2.29
RIC1	YLR039C	YLR118C	Q12354	227 aa		0.77	□□□□□ -2.29
RIC1	YLR039C	RPL29	P05747	59 aa	Predicted RBP	0.76	□□□□□ -2.29
RIC1	YLR039C	UBC5	P15732	148 aa		0.76	□□□□□ -2.29
RIC1	YLR039C	POP7	P38291	140 aa		0.76	□□□□□ -2.29
RIC1	YLR039C	AIM4	P38305	123 aa	Predicted RBP	0.76	□□□□□ -2.29
RIC1	YLR039C	RPC10	P40422	70 aa		0.76	□□□□□ -2.29
RIC1	YLR039C	PHS1	P40857	217 aa		0.76	□□□□□ -2.29
RIC1	YLR039C	YNL122C	P53921	115 aa	Predicted RBP	0.76	□□□□□ -2.29
RIC1	YLR039C	YMR082C	Q04276	118 aa		0.76	□□□□□ -2.29
RIC1	YLR039C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.76	□□□□□ -2.29
RIC1	YLR039C	MIC27	P50945	234 aa		0.76	□□□□□ -2.29
RIC1	YLR039C	YMR122C	Q03879	124 aa		0.76	□□□□□ -2.29
RIC1	YLR039C	GAT4	P40569	121 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	DYN2	Q02647	92 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	NAT5	Q08689	176 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	UGX2	P32772	223 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	TOS6	P48560	102 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	YGL149W	P53116	101 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	YKL023C-A	Q2V2P3	75 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	YOR376W-A	Q3E805	51 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	HAP3	P13434	144 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	YEA6	P39953	335 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	MGR2	Q02889	113 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	YMR090W	Q04304	227 aa	Known RBP	0.75	□□□□□ -2.29
RIC1	YLR039C	PCC1	Q3E833	88 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	ENV10	Q99382	181 aa		0.75	□□□□□ -2.29
RIC1	YLR039C	YIL102C	P40488	101 aa		0.74	□□□□□ -2.29
RIC1	YLR039C	PMP3	P87284	55 aa		0.74	□□□□□ -2.29
RIC1	YLR039C	YLR099W-A	Q3E798	87 aa		0.74	□□□□□ -2.29
RIC1	YLR039C	PAU7	P39545	55 aa		0.74	□□□□□ -2.29
RIC1	YLR039C	PAU5	P43575	122 aa		0.74	□□□□□ -2.29
RIC1	YLR039C	GPI19	Q04082	140 aa		0.74	□□□□□ -2.29
RIC1	YLR039C	COX19	Q3E731	98 aa		0.74	□□□□□ -2.29
RIC1	YLR039C	YLR307C-A	Q3E825	87 aa		0.74	□□□□□ -2.29
RIC1	YLR039C	HUG1	Q6Q5K6	68 aa		0.74	□□□□□ -2.29
RIC1	YLR039C	PFY1	P07274	126 aa		0.73	□□□□□ -2.29
RIC1	YLR039C	MRPL44	P19956	98 aa		0.73	□□□□□ -2.29
RIC1	YLR039C	RPL37B	P51402	88 aa	Known RBP	0.73	□□□□□ -2.29
RIC1	YLR039C	CNL1	Q06333	122 aa		0.73	□□□□□ -2.29
RIC1	YLR039C	YPL225W	Q08971	146 aa	Known RBP	0.73	□□□□□ -2.29
RIC1	YLR039C	YGR121W-A	Q3E816	71 aa		0.73	□□□□□ -2.29
RIC1	YLR039C	PAU21	P0CE86	164 aa		0.73	□□□□□ -2.29
RIC1	YLR039C	PAU22	P0CE87	164 aa		0.73	□□□□□ -2.29
RIC1	YLR039C	YDR042C	Q03205	200 aa		0.73	□□□□□ -2.29
RIC1	YLR039C	YLR296W	Q05898	108 aa		0.73	□□□□□ -2.29
RIC1	YLR039C	YOR105W	Q08504	108 aa		0.73	□□□□□ -2.29
RIC1	YLR039C	YLL066W-B	Q8TGJ7	56 aa		0.73	□□□□□ -2.29
RIC1	YLR039C	URA2	P07259	2214 aa	Known RBP	0.73	□□□□□ -2.29
RIC1	YLR039C	YBR200W-A	Q3E755	54 aa		0.73	□□□□□ -2.29
RIC1	YLR039C	ECM12	O13529	151 aa		0.72	□□□□□ -2.29
RIC1	YLR039C	PDX3	P38075	228 aa	Known RBP	0.72	□□□□□ -2.29
RIC1	YLR039C	HHY1	P39982	102 aa		0.72	□□□□□ -2.29
RIC1	YLR039C	YER137C	P40083	148 aa	Known RBP	0.72	□□□□□ -2.29
RIC1	YLR039C	PAU15	P40585	124 aa		0.72	□□□□□ -2.29
RIC1	YLR039C	PAU4	P53427	120 aa		0.72	□□□□□ -2.29
RIC1	YLR039C	ARL3	Q02804	198 aa		0.72	□□□□□ -2.29
RIC1	YLR039C	ATP14	Q12349	124 aa		0.72	□□□□□ -2.29
RIC1	YLR039C	Q0017	Q9ZZX8	53 aa		0.72	□□□□□ -2.29
RIC1	YLR039C	ANB1	P19211	157 aa		0.71	□□□□□ -2.3
RIC1	YLR039C	GCV3	P39726	170 aa	Predicted RBP	0.71	□□□□□ -2.3
RIC1	YLR039C	APS2	Q00381	147 aa		0.71	□□□□□ -2.3
RIC1	YLR039C	PAU1	P0CE88	120 aa		0.71	□□□□□ -2.3
RIC1	YLR039C	PAU14	P0CE89	120 aa		0.71	□□□□□ -2.3
RIC1	YLR039C	PAU6	P0CE90	120 aa		0.71	□□□□□ -2.3
RIC1	YLR039C	PAU18	P0CE91	120 aa		0.71	□□□□□ -2.3
RIC1	YLR039C	PAU8	P0CE92	120 aa		0.71	□□□□□ -2.3
RIC1	YLR039C	PAU11	P0CE93	120 aa		0.71	□□□□□ -2.3
RIC1	YLR039C	MRPL31	P14063	131 aa	Predicted RBP	0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms