RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C ATP15P21306 62 aa6.92□□□□□ -1.3
SHB17YKR043C YPL073CP40323 161 aa6.92□□□□□ -1.3
SHB17YKR043C ELC1Q03071 99 aa6.92□□□□□ -1.3
SHB17YKR043C ISU2Q12056 156 aa6.92□□□□□ -1.3
SHB17YKR043C YMR175W-AQ3E766 64 aa6.92□□□□□ -1.3
SHB17YKR043C YKL070WP36087 169 aa6.9□□□□□ -1.3
SHB17YKR043C SAP30P38429 201 aa6.9□□□□□ -1.3
SHB17YKR043C YDR029WQ12111 104 aa6.9□□□□□ -1.3
SHB17YKR043C ADH1P00330 348 aaKnown RBP6.89□□□□□ -1.31
SHB17YKR043C SNA2P56508 79 aa6.88□□□□□ -1.31
SHB17YKR043C DFM1Q12743 341 aaKnown RBP6.88□□□□□ -1.31
SHB17YKR043C YAL065CO13511 128 aa6.87□□□□□ -1.31
SHB17YKR043C YKR041WP36134 250 aa6.87□□□□□ -1.31
SHB17YKR043C YER181CP40097 107 aa6.86□□□□□ -1.31
SHB17YKR043C DUT1P33317 147 aa6.85□□□□□ -1.31
SHB17YKR043C VTC1P40046 129 aaRIP-Chip data6.85□□□□□ -1.31not detected
SHB17YKR043C AIM11P87275 137 aa6.85□□□□□ -1.31
SHB17YKR043C RPL32P38061 130 aaKnown RBP6.84□□□□□ -1.31
SHB17YKR043C SMP1P38128 452 aa6.84□□□□□ -1.31
SHB17YKR043C YPL261CQ08976 102 aa6.84□□□□□ -1.31
SHB17YKR043C SHU1P38751 150 aa6.83□□□□□ -1.32
SHB17YKR043C COX14P39103 70 aa6.83□□□□□ -1.32
SHB17YKR043C YDL241WQ07738 123 aa6.83□□□□□ -1.32
SHB17YKR043C YDL022C-AP0C5L6 82 aa6.81□□□□□ -1.32
SHB17YKR043C NHP2P32495 156 aaPredicted RBP6.81□□□□□ -1.32
SHB17YKR043C YLR307C-AQ3E825 87 aa6.81□□□□□ -1.32
SHB17YKR043C OXA1P39952 402 aa6.8□□□□□ -1.32
SHB17YKR043C PPT2Q12036 173 aa6.8□□□□□ -1.32
SHB17YKR043C IGO2Q9P305 131 aa6.8□□□□□ -1.32
SHB17YKR043C TOA2P32774 122 aa6.79□□□□□ -1.32
SHB17YKR043C PEX17P40155 199 aa6.79□□□□□ -1.32
SHB17YKR043C RPL18AP0CX49 186 aaKnown RBP6.78□□□□□ -1.32
SHB17YKR043C RPL18BP0CX50 186 aaKnown RBP6.78□□□□□ -1.32
SHB17YKR043C CDC43P18898 376 aa6.78□□□□□ -1.32
SHB17YKR043C ATX1P38636 73 aa6.78□□□□□ -1.32
SHB17YKR043C PEX22P39718 180 aa6.78□□□□□ -1.32
SHB17YKR043C YNR077CP53758 84 aa6.78□□□□□ -1.32
SHB17YKR043C AQY2P0CD90 149 aa6.77□□□□□ -1.33
SHB17YKR043C YEL067CP39978 195 aa6.77□□□□□ -1.33
SHB17YKR043C LCL1Q02786 101 aa6.77□□□□□ -1.33
SHB17YKR043C LSM6Q06406 86 aaKnown RBP6.76□□□□□ -1.33
SHB17YKR043C OST2P46964 130 aa6.75□□□□□ -1.33
SHB17YKR043C ECM12O13529 151 aa6.74□□□□□ -1.33
SHB17YKR043C RPP2AP05319 106 aaKnown RBP6.74□□□□□ -1.33
SHB17YKR043C YFR057WP43625 151 aa6.74□□□□□ -1.33
SHB17YKR043C MRPS12P53732 153 aa6.74□□□□□ -1.33
SHB17YKR043C HPA2Q06592 156 aa6.74□□□□□ -1.33
SHB17YKR043C QCR8P08525 94 aa6.73□□□□□ -1.33
SHB17YKR043C CWP2P43497 92 aa6.73□□□□□ -1.33
SHB17YKR043C MET32Q12041 191 aa6.73□□□□□ -1.33
SHB17YKR043C YGL041C-BQ3E750 60 aa6.73□□□□□ -1.33
SHB17YKR043C RPL28P02406 149 aaKnown RBP6.72□□□□□ -1.33
SHB17YKR043C SMD1Q02260 146 aaPredicted RBP6.72□□□□□ -1.33
SHB17YKR043C MMS2P53152 137 aa6.71□□□□□ -1.34
SHB17YKR043C STF1P01098 86 aa6.7□□□□□ -1.34
SHB17YKR043C INO4P13902 151 aa6.7□□□□□ -1.34
SHB17YKR043C MVB12P42939 101 aa6.7□□□□□ -1.34
SHB17YKR043C ABF2Q02486 183 aa6.7□□□□□ -1.34
SHB17YKR043C YFL019CP43576 117 aa6.68□□□□□ -1.34
SHB17YKR043C ISD11Q6Q560 94 aa6.68□□□□□ -1.34
SHB17YKR043C Q0032Q9ZZX7 96 aa6.68□□□□□ -1.34
SHB17YKR043C YBL039W-BP0C268 59 aa6.67□□□□□ -1.34
SHB17YKR043C IGD1P43598 195 aa6.67□□□□□ -1.34
SHB17YKR043C YNL190WP53872 204 aa6.67□□□□□ -1.34
SHB17YKR043C YLL006W-AQ3E814 58 aa6.67□□□□□ -1.34
SHB17YKR043C AIM19P40502 157 aa6.66□□□□□ -1.34
SHB17YKR043C YFL065CP43539 102 aa6.66□□□□□ -1.34
SHB17YKR043C YPR203WQ08994 102 aa6.66□□□□□ -1.34
SHB17YKR043C RPA12P32529 125 aaKnown RBP6.65□□□□□ -1.34
SHB17YKR043C UGX2P32772 223 aa6.65□□□□□ -1.34
SHB17YKR043C YFL067WP43537 175 aa6.65□□□□□ -1.34
SHB17YKR043C COX10P21592 462 aa6.64□□□□□ -1.35
SHB17YKR043C UBC11P52492 156 aa6.64□□□□□ -1.35
SHB17YKR043C YCR085WP25650 117 aa6.62□□□□□ -1.35
SHB17YKR043C RPL29P05747 59 aaPredicted RBP6.6□□□□□ -1.35
SHB17YKR043C DDR48P18899 430 aaKnown RBP6.6□□□□□ -1.35
SHB17YKR043C YAR1P46683 200 aa6.6□□□□□ -1.35
SHB17YKR043C YGL193CP53097 103 aa6.6□□□□□ -1.35
SHB17YKR043C YNL184CP53876 108 aa6.6□□□□□ -1.35
SHB17YKR043C YHR130CP38834 111 aa6.59□□□□□ -1.35
SHB17YKR043C MID2P36027 376 aa6.58□□□□□ -1.36
SHB17YKR043C YIA6P40556 373 aa6.58□□□□□ -1.36
SHB17YKR043C EOS1P53938 366 aa6.58□□□□□ -1.36
SHB17YKR043C YBL112CQ3E7Y4 105 aa6.58□□□□□ -1.36
SHB17YKR043C KRE1P17260 313 aa6.57□□□□□ -1.36
SHB17YKR043C DSE2P38844 325 aa6.56□□□□□ -1.36
SHB17YKR043C YAL063C-AQ3E791 96 aa6.56□□□□□ -1.36
SHB17YKR043C YNL162W-AQ3E7A8 72 aa6.56□□□□□ -1.36
SHB17YKR043C UBC4P15731 148 aa6.55□□□□□ -1.36
SHB17YKR043C YFL041W-AQ3E817 63 aa6.55□□□□□ -1.36
SHB17YKR043C YOR304C-AO14468 76 aa6.54□□□□□ -1.36
SHB17YKR043C SKI6P46948 246 aaPredicted RBP6.53□□□□□ -1.36
SHB17YKR043C KNH1P50112 268 aa6.53□□□□□ -1.36
SHB17YKR043C HUR1P45820 110 aa6.52□□□□□ -1.37
SHB17YKR043C YOR020W-AQ3E824 90 aa6.52□□□□□ -1.37
SHB17YKR043C YLR415CO13578 112 aa6.51□□□□□ -1.37
SHB17YKR043C RGM1Q00453 211 aa6.51□□□□□ -1.37
SHB17YKR043C MRPL24P36525 258 aaPredicted RBP6.5□□□□□ -1.37
SHB17YKR043C RPL26AP05743 127 aaKnown RBP6.48□□□□□ -1.37
SHB17YKR043C YER039C-AP0CD97 72 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms