RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C RPS23BP0CX30 145 aa5.28□□□□□ -1.56
HEL1YKR017C ERG2P32352 222 aa5.28□□□□□ -1.56
HEL1YKR017C YMR122CQ03879 124 aa5.28□□□□□ -1.56
HEL1YKR017C YPR096CO13587 100 aa5.28□□□□□ -1.56
HEL1YKR017C RPR2P40571 144 aa5.28□□□□□ -1.56
HEL1YKR017C RPL26BP53221 127 aaKnown RBP5.28□□□□□ -1.56
HEL1YKR017C FLO9P39712 1322 aa5.27□□□□□ -1.57
HEL1YKR017C YHR022CP38763 256 aa5.26□□□□□ -1.57
HEL1YKR017C MIG3P39943 394 aa5.26□□□□□ -1.57
HEL1YKR017C YIR020CP40575 100 aa5.26□□□□□ -1.57
HEL1YKR017C TMC1Q08422 150 aaPredicted RBP5.26□□□□□ -1.57
HEL1YKR017C YIL163CP40448 117 aa5.25□□□□□ -1.57
HEL1YKR017C ARC15P40518 154 aaRIP-Chip data5.25□□□□□ -1.57not detected
HEL1YKR017C YPI1P43587 155 aa5.25□□□□□ -1.57
HEL1YKR017C YGR035W-AQ45U48 73 aa5.25□□□□□ -1.57
HEL1YKR017C YBL071CP38185 102 aa5.24□□□□□ -1.57
HEL1YKR017C MPC2P38857 129 aa5.24□□□□□ -1.57
HEL1YKR017C DCV1P43595 202 aa5.24□□□□□ -1.57
HEL1YKR017C YNR077CP53758 84 aa5.24□□□□□ -1.57
HEL1YKR017C VPS68Q12016 184 aa5.24□□□□□ -1.57
HEL1YKR017C YOR192C-CQ3E736 78 aa5.24□□□□□ -1.57
HEL1YKR017C YLR285C-AQ3E771 56 aa5.24□□□□□ -1.57
HEL1YKR017C COX14P39103 70 aa5.24□□□□□ -1.57
HEL1YKR017C YEL067CP39978 195 aa5.24□□□□□ -1.57
HEL1YKR017C YPR153WQ06537 140 aa5.24□□□□□ -1.57
HEL1YKR017C RPL36BO14455 100 aaKnown RBP5.22□□□□□ -1.57
HEL1YKR017C RPL36AP05745 100 aaPredicted RBP5.22□□□□□ -1.57
HEL1YKR017C YGL149WP53116 101 aa5.21□□□□□ -1.58
HEL1YKR017C YDL241WQ07738 123 aa5.2□□□□□ -1.58
HEL1YKR017C SRX1P36077 127 aa5.19□□□□□ -1.58
HEL1YKR017C SPC1P46965 94 aa5.19□□□□□ -1.58
HEL1YKR017C EDC1P53080 175 aaPredicted RBP5.19□□□□□ -1.58
HEL1YKR017C PAU7P39545 55 aa5.18□□□□□ -1.58
HEL1YKR017C YPR053CQ6Q5F3 151 aa5.18□□□□□ -1.58
HEL1YKR017C YHL037CP38733 133 aa5.18□□□□□ -1.58
HEL1YKR017C COX23P38824 151 aa5.18□□□□□ -1.58
HEL1YKR017C YGR269WP40326 108 aa5.18□□□□□ -1.58
HEL1YKR017C YDR182W-AQ3E796 67 aa5.18□□□□□ -1.58
HEL1YKR017C YJL197C-AP0C5P0 93 aa5.17□□□□□ -1.58
HEL1YKR017C YMR007WQ03675 126 aa5.17□□□□□ -1.58
HEL1YKR017C IRC21Q04772 201 aa5.17□□□□□ -1.58
HEL1YKR017C CDC39P25655 2108 aaKnown RBP5.16□□□□□ -1.58
HEL1YKR017C REE1P40893 198 aa5.16□□□□□ -1.58
HEL1YKR017C HSP150P32478 413 aa5.15□□□□□ -1.58
HEL1YKR017C MRPL38P35996 138 aaPredicted RBP5.15□□□□□ -1.58
HEL1YKR017C YCR095W-AQ3E787 52 aa5.15□□□□□ -1.58
HEL1YKR017C COA3Q3E7B2 85 aa5.15□□□□□ -1.58
HEL1YKR017C AIM26P32858 118 aa5.15□□□□□ -1.59
HEL1YKR017C PRM7Q12459 698 aa5.15□□□□□ -1.59
HEL1YKR017C RTC6O14464 93 aa5.14□□□□□ -1.59
HEL1YKR017C YLR194CQ05777 254 aa5.14□□□□□ -1.59
HEL1YKR017C YDL022C-AP0C5L6 82 aa5.12□□□□□ -1.59
HEL1YKR017C YIL156W-BQ2V2P4 73 aa5.12□□□□□ -1.59
HEL1YKR017C FIG2P25653 1609 aa5.12□□□□□ -1.59
HEL1YKR017C HOT13P36078 116 aa5.12□□□□□ -1.59
HEL1YKR017C SNA2P56508 79 aa5.12□□□□□ -1.59
HEL1YKR017C YOL029CQ08187 201 aa5.12□□□□□ -1.59
HEL1YKR017C NOP10Q6Q547 58 aaPredicted RBP5.12□□□□□ -1.59
HEL1YKR017C MRX7P53869 86 aa5.11□□□□□ -1.59
HEL1YKR017C RPS30AP0CX33 63 aaKnown RBP5.1□□□□□ -1.59
HEL1YKR017C RPS30BP0CX34 63 aaKnown RBP5.1□□□□□ -1.59
HEL1YKR017C HMRA2P0CY13 119 aa5.09□□□□□ -1.59
HEL1YKR017C YPR013CQ12145 317 aa5.09□□□□□ -1.59
HEL1YKR017C YDR010CQ12426 110 aa5.09□□□□□ -1.59
HEL1YKR017C YOL166W-AQ8TGJ1 51 aa5.08□□□□□ -1.6
HEL1YKR017C KRE9P39005 276 aa5.08□□□□□ -1.6
HEL1YKR017C YER078W-AQ3E7A2 54 aa5.08□□□□□ -1.6
HEL1YKR017C YOR032W-AQ8TGS1 66 aa5.08□□□□□ -1.6
HEL1YKR017C FLO1P32768 1537 aa5.06□□□□□ -1.6
HEL1YKR017C QCR8P08525 94 aa5.05□□□□□ -1.6
HEL1YKR017C YHR125WP38831 101 aa5.05□□□□□ -1.6
HEL1YKR017C POR2P40478 281 aa5.05□□□□□ -1.6
HEL1YKR017C YMR321CQ04898 105 aa5.05□□□□□ -1.6
HEL1YKR017C BPH1P25356 2167 aa5.05□□□□□ -1.6
HEL1YKR017C BSC4P53841 131 aa5.05□□□□□ -1.6
HEL1YKR017C IGD1P43598 195 aa5.04□□□□□ -1.6
HEL1YKR017C YMR244WQ04018 355 aa5.03□□□□□ -1.6
HEL1YKR017C YLR111WQ12528 110 aa5.03□□□□□ -1.6
HEL1YKR017C MGR2Q02889 113 aa5.02□□□□□ -1.61
HEL1YKR017C YOR034C-AQ3E735 80 aa5.02□□□□□ -1.61
HEL1YKR017C YCR022CP25620 114 aa5.02□□□□□ -1.61
HEL1YKR017C YKR032WP36127 104 aa5.02□□□□□ -1.61
HEL1YKR017C YNL208WP40159 199 aaKnown RBP5.01□□□□□ -1.61
HEL1YKR017C SHU1P38751 150 aa5□□□□□ -1.61
HEL1YKR017C FIT2Q08906 153 aa5□□□□□ -1.61
HEL1YKR017C YNL042W-BQ3E7Z2 85 aa5□□□□□ -1.61
HEL1YKR017C YLR236CA0A023PZG4 107 aa4.99□□□□□ -1.61
HEL1YKR017C YBR027CP38220 110 aa4.99□□□□□ -1.61
HEL1YKR017C YJR085CP47131 105 aaKnown RBP4.98□□□□□ -1.61
HEL1YKR017C RPS11AP0CX47 156 aaKnown RBP4.97□□□□□ -1.61
HEL1YKR017C RPS11BP0CX48 156 aaKnown RBP4.97□□□□□ -1.61
HEL1YKR017C HUA1P40325 198 aa4.97□□□□□ -1.61
HEL1YKR017C YNL190WP53872 204 aa4.97□□□□□ -1.61
HEL1YKR017C HUB1Q6Q546 73 aa4.97□□□□□ -1.61
HEL1YKR017C HUG1Q6Q5K6 68 aa4.97□□□□□ -1.61
HEL1YKR017C YCL048W-AQ2V2Q2 79 aa4.96□□□□□ -1.61
HEL1YKR017C TOS6P48560 102 aa4.95□□□□□ -1.62
HEL1YKR017C TOM7P53507 60 aa4.95□□□□□ -1.62
HEL1YKR017C API2Q04413 109 aa4.95□□□□□ -1.62
HEL1YKR017C GLT1Q12680 2145 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms