RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C ATP15P21306 62 aa1.54□□□□□ -2.16
UFD4YKL010C SVP26P38869 228 aa1.54□□□□□ -2.16
UFD4YKL010C YAL063C-AQ3E791 96 aa1.54□□□□□ -2.16
UFD4YKL010C ARC15P40518 154 aaRIP-Chip data1.54□□□□□ -2.16not detected
UFD4YKL010C YMR175W-AQ3E766 64 aa1.54□□□□□ -2.16
UFD4YKL010C YPR010C-AA5Z2X5 72 aa1.54□□□□□ -2.16
UFD4YKL010C ADH1P00330 348 aaKnown RBP1.54□□□□□ -2.16
UFD4YKL010C CWP2P43497 92 aa1.54□□□□□ -2.16
UFD4YKL010C YFR057WP43625 151 aa1.54□□□□□ -2.16
UFD4YKL010C YMR295CQ03559 197 aa1.54□□□□□ -2.16
UFD4YKL010C SRL1Q08673 210 aa1.54□□□□□ -2.16
UFD4YKL010C SLO1Q3E784 85 aa1.54□□□□□ -2.16
UFD4YKL010C ICY1Q04329 127 aa1.53□□□□□ -2.16
UFD4YKL010C PPT2Q12036 173 aa1.53□□□□□ -2.16
UFD4YKL010C NHP2P32495 156 aaPredicted RBP1.53□□□□□ -2.16
UFD4YKL010C YHR130CP38834 111 aa1.53□□□□□ -2.16
UFD4YKL010C YIA6P40556 373 aa1.53□□□□□ -2.16
UFD4YKL010C CAX4P53223 239 aa1.53□□□□□ -2.16
UFD4YKL010C YNL190WP53872 204 aa1.53□□□□□ -2.16
UFD4YKL010C PMP3P87284 55 aa1.53□□□□□ -2.16
UFD4YKL010C YLL066W-BQ8TGJ7 56 aa1.53□□□□□ -2.16
UFD4YKL010C URA2P07259 2214 aaKnown RBP1.53□□□□□ -2.16
UFD4YKL010C YHR212W-AP0CX91 67 aa1.53□□□□□ -2.16
UFD4YKL010C YCL042WP25572 119 aa1.52□□□□□ -2.17
UFD4YKL010C YER085CP40058 173 aa1.52□□□□□ -2.17
UFD4YKL010C SIM1P40472 476 aa1.52□□□□□ -2.17
UFD4YKL010C YDR119W-AQ2V2P9 66 aa1.52□□□□□ -2.17
UFD4YKL010C YOR011W-AQ3E807 68 aa1.52□□□□□ -2.17
UFD4YKL010C CDC43P18898 376 aa1.52□□□□□ -2.17
UFD4YKL010C HPA2Q06592 156 aa1.52□□□□□ -2.17
UFD4YKL010C YNL162W-AQ3E7A8 72 aa1.52□□□□□ -2.17
UFD4YKL010C YCL021W-AQ96VH3 125 aa1.52□□□□□ -2.17
UFD4YKL010C MRPL24P36525 258 aaPredicted RBP1.52□□□□□ -2.17
UFD4YKL010C SKI6P46948 246 aaPredicted RBP1.52□□□□□ -2.17
UFD4YKL010C YDR115WQ04598 105 aa1.52□□□□□ -2.17
UFD4YKL010C UBC4P15731 148 aa1.51□□□□□ -2.17
UFD4YKL010C ATX1P38636 73 aa1.51□□□□□ -2.17
UFD4YKL010C YDL186WP48568 277 aa1.51□□□□□ -2.17
UFD4YKL010C RPL28P02406 149 aaKnown RBP1.51□□□□□ -2.17
UFD4YKL010C RUB1Q03919 77 aa1.51□□□□□ -2.17
UFD4YKL010C YLL006W-AQ3E814 58 aa1.51□□□□□ -2.17
UFD4YKL010C ENV10Q99382 181 aa1.51□□□□□ -2.17
UFD4YKL010C YLR415CO13578 112 aa1.51□□□□□ -2.17
UFD4YKL010C AUA1P32450 94 aa1.51□□□□□ -2.17
UFD4YKL010C YDR246W-AQ3E763 66 aa1.51□□□□□ -2.17
UFD4YKL010C TIM10P87108 93 aa1.5□□□□□ -2.17
UFD4YKL010C IRC21Q04772 201 aa1.5□□□□□ -2.17
UFD4YKL010C MID2P36027 376 aa1.5□□□□□ -2.17
UFD4YKL010C YCR041WP37265 110 aa1.5□□□□□ -2.17
UFD4YKL010C RSM19P53733 91 aaPredicted RBP1.5□□□□□ -2.17
UFD4YKL010C YPL257WQ08974 193 aa1.5□□□□□ -2.17
UFD4YKL010C YPL038W-AQ3E7B4 63 aa1.5□□□□□ -2.17
UFD4YKL010C YIL002W-AQ3E7Z5 69 aa1.5□□□□□ -2.17
UFD4YKL010C YCR075W-AQ3E830 75 aa1.5□□□□□ -2.17
UFD4YKL010C RPL18AP0CX49 186 aaKnown RBP1.5□□□□□ -2.17
UFD4YKL010C RPL18BP0CX50 186 aaKnown RBP1.5□□□□□ -2.17
UFD4YKL010C SFT1P43682 97 aa1.5□□□□□ -2.17
UFD4YKL010C YIR021W-AQ3E739 70 aa1.49□□□□□ -2.17
UFD4YKL010C YFL065CP43539 102 aa1.49□□□□□ -2.17
UFD4YKL010C YPR203WQ08994 102 aa1.49□□□□□ -2.17
UFD4YKL010C YPL229WQ99395 206 aa1.49□□□□□ -2.17
UFD4YKL010C HUR1P45820 110 aa1.49□□□□□ -2.17
UFD4YKL010C ATP18P81450 59 aa1.49□□□□□ -2.17
UFD4YKL010C YMR320WQ04897 101 aa1.49□□□□□ -2.17
UFD4YKL010C CRC1Q12289 327 aa1.49□□□□□ -2.17
UFD4YKL010C SMP1P38128 452 aa1.48□□□□□ -2.17
UFD4YKL010C TOM6P33448 61 aa1.48□□□□□ -2.17
UFD4YKL010C YGR035W-AQ45U48 73 aa1.48□□□□□ -2.17
UFD4YKL010C YFL019CP43576 117 aa1.48□□□□□ -2.17
UFD4YKL010C SPC1P46965 94 aa1.48□□□□□ -2.17
UFD4YKL010C ABF2Q02486 183 aa1.48□□□□□ -2.17
UFD4YKL010C SGF11Q03067 99 aa1.48□□□□□ -2.17
UFD4YKL010C TDA8Q6B2U8 126 aa1.48□□□□□ -2.17
UFD4YKL010C YFR009W-AP0C5M9 85 aa1.48□□□□□ -2.17
UFD4YKL010C YJL197C-AP0C5P0 93 aa1.48□□□□□ -2.17
UFD4YKL010C YHR139C-AO13536 103 aa1.47□□□□□ -2.17
UFD4YKL010C YBL039W-BP0C268 59 aa1.47□□□□□ -2.17
UFD4YKL010C YHL042WP38729 150 aa1.47□□□□□ -2.17
UFD4YKL010C IGD1P43598 195 aa1.47□□□□□ -2.17
UFD4YKL010C KNH1P50112 268 aa1.47□□□□□ -2.17
UFD4YKL010C YBR182C-AQ8TGU6 64 aa1.47□□□□□ -2.17
UFD4YKL010C YBL081WP38180 368 aaKnown RBP1.47□□□□□ -2.17
UFD4YKL010C YSY6P38374 65 aa1.47□□□□□ -2.17
UFD4YKL010C YIL059CP40520 121 aa1.47□□□□□ -2.17
UFD4YKL010C YLR281CQ05863 155 aa1.47□□□□□ -2.17
UFD4YKL010C RAD6P06104 172 aa1.46□□□□□ -2.17
UFD4YKL010C COX23P38824 151 aa1.46□□□□□ -2.17
UFD4YKL010C DSE2P38844 325 aa1.46□□□□□ -2.17
UFD4YKL010C MVB12P42939 101 aa1.46□□□□□ -2.17
UFD4YKL010C HOT13P36078 116 aa1.46□□□□□ -2.18
UFD4YKL010C HAL1Q01766 294 aa1.46□□□□□ -2.18
UFD4YKL010C YBR230W-AQ3E762 66 aa1.46□□□□□ -2.18
UFD4YKL010C YDR182W-AQ3E796 67 aa1.46□□□□□ -2.18
UFD4YKL010C YJR107C-AP0CT86 78 aa1.46□□□□□ -2.18
UFD4YKL010C YPL080CQ02826 108 aa1.46□□□□□ -2.18
UFD4YKL010C YGL193CP53097 103 aa1.45□□□□□ -2.18
UFD4YKL010C RTC6O14464 93 aa1.45□□□□□ -2.18
UFD4YKL010C YNL042W-BQ3E7Z2 85 aa1.45□□□□□ -2.18
UFD4YKL010C INO4P13902 151 aa1.44□□□□□ -2.18
UFD4YKL010C FYV5P25585 152 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 63.1 ms