RNA–Protein interactions for RNA: YJL089W

SIP4, Transcript of C6 zinc cluster transcriptional activator, yeast

Gene SIP4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP4	YJL089W	YPR014C	Q6B0W2	109 aa		0.74	□□□□□ -2.29
SIP4	YJL089W	ADH1	P00330	348 aa	Known RBP	0.73	□□□□□ -2.29
SIP4	YJL089W	RPL26A	P05743	127 aa	Known RBP	0.73	□□□□□ -2.29
SIP4	YJL089W	CPR1	P14832	162 aa	Known RBP	0.73	□□□□□ -2.29
SIP4	YJL089W	EDC2	P40023	145 aa	Predicted RBP	0.73	□□□□□ -2.29
SIP4	YJL089W	RPL26B	P53221	127 aa	Known RBP	0.73	□□□□□ -2.29
SIP4	YJL089W	SMD1	Q02260	146 aa	Predicted RBP	0.73	□□□□□ -2.29
SIP4	YJL089W	CNL1	Q06333	122 aa		0.73	□□□□□ -2.29
SIP4	YJL089W	YGR121W-A	Q3E816	71 aa		0.73	□□□□□ -2.29
SIP4	YJL089W	YOR020W-A	Q3E824	90 aa		0.73	□□□□□ -2.29
SIP4	YJL089W	UBC4	P15731	148 aa		0.73	□□□□□ -2.29
SIP4	YJL089W	DDR48	P18899	430 aa	Known RBP	0.73	□□□□□ -2.29
SIP4	YJL089W	ATP15	P21306	62 aa		0.73	□□□□□ -2.29
SIP4	YJL089W	GSP2	P32836	220 aa	Known RBP	0.73	□□□□□ -2.29
SIP4	YJL089W	YKL044W	P36092	106 aa		0.73	□□□□□ -2.29
SIP4	YJL089W	YJR085C	P47131	105 aa	Known RBP	0.73	□□□□□ -2.29
SIP4	YJL089W	AIM11	P87275	137 aa		0.73	□□□□□ -2.29
SIP4	YJL089W	YMR103C	Q04436	120 aa		0.73	□□□□□ -2.29
SIP4	YJL089W	ATP16	Q12165	160 aa		0.73	□□□□□ -2.29
SIP4	YJL089W	TPT1	Q12272	230 aa	Known RBP	0.73	□□□□□ -2.29
SIP4	YJL089W	SCS22	Q6Q595	175 aa		0.73	□□□□□ -2.29
SIP4	YJL089W	YLR156W	P0CE96	114 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	YLR159W	P0CE97	114 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	YLR161W	P0CE98	114 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	SCM4	P32564	187 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	SPT4	P32914	102 aa	Predicted RBP	0.72	□□□□□ -2.29
SIP4	YJL089W	IGD1	P43598	195 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	YGL149W	P53116	101 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	POP3	P53833	195 aa	Predicted RBP	0.72	□□□□□ -2.29
SIP4	YJL089W	YML079W	Q03629	201 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	YNL042W-B	Q3E7Z2	85 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	YLL006W-A	Q3E814	58 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	COA6	Q3E846	104 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	KSH1	Q8TGJ3	72 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	IGO2	Q9P305	131 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	RPL18A	P0CX49	186 aa	Known RBP	0.72	□□□□□ -2.29
SIP4	YJL089W	RPL18B	P0CX50	186 aa	Known RBP	0.72	□□□□□ -2.29
SIP4	YJL089W	YKR041W	P36134	250 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	FYV4	P38783	130 aa	Predicted RBP	0.72	□□□□□ -2.29
SIP4	YJL089W	NSE4	P43124	402 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	SFT1	P43682	97 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	MRPS12	P53732	153 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	YOR268C	Q08734	132 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	KTI11	Q3E840	82 aa		0.72	□□□□□ -2.29
SIP4	YJL089W	YLR236C	A0A023PZG4	107 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	COX10	P21592	462 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	YCR007C	P25354	239 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	MRPL24	P36525	258 aa	Predicted RBP	0.71	□□□□□ -2.3
SIP4	YJL089W	YER134C	P40081	178 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	DDR2	P89113	61 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	ARL3	Q02804	198 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	CUE4	Q04201	117 aa	Predicted RBP	0.71	□□□□□ -2.3
SIP4	YJL089W	ICY1	Q04329	127 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	YPL261C	Q08976	102 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	PAU17	Q12370	124 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	ATP5	P09457	212 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	SEC11	P15367	167 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	UGX2	P32772	223 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	YPL073C	P40323	161 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	HPA2	Q06592	156 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	YPL257W	Q08974	193 aa		0.71	□□□□□ -2.3
SIP4	YJL089W	FYV5	P25585	152 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	MRPL11	P36521	249 aa	Predicted RBP	0.7	□□□□□ -2.3
SIP4	YJL089W	YHL018W	P38744	120 aa	Predicted RBP	0.7	□□□□□ -2.3
SIP4	YJL089W	YEL067C	P39978	195 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	YIA6	P40556	373 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	EOS1	P53938	366 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	RGM1	Q00453	211 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	YBR230W-A	Q3E762	66 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	YJL127C-B	Q3E828	52 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	RPL28	P02406	149 aa	Known RBP	0.7	□□□□□ -2.3
SIP4	YJL089W	KRE1	P17260	313 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	NHP2	P32495	156 aa	Predicted RBP	0.7	□□□□□ -2.3
SIP4	YJL089W	YHR130C	P38834	111 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	MSL1	P40567	111 aa	Predicted RBP	0.7	□□□□□ -2.3
SIP4	YJL089W	YGL230C	P53074	147 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	YML108W	Q03759	105 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	IRC21	Q04772	201 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	FYV7	Q12247	151 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	YAL063C-A	Q3E791	96 aa		0.7	□□□□□ -2.3
SIP4	YJL089W	YDL022C-A	P0C5L6	82 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	MRPL44	P19956	98 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	SSS1	P35179	80 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	POP7	P38291	140 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	YHL005C	P38752	130 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	PAU23	Q07987	124 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	YOR072W	Q08486	104 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	YMR230W-A	Q3E7B5	62 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	COX7	P10174	60 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	YCR043C	P25361	127 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	OST2	P46964	130 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	YNR077C	P53758	84 aa		0.69	□□□□□ -2.3
SIP4	YJL089W	RPL36B	O14455	100 aa	Known RBP	0.68	□□□□□ -2.3
SIP4	YJL089W	BET1	P22804	142 aa		0.68	□□□□□ -2.3
SIP4	YJL089W	YAR1	P46683	200 aa		0.68	□□□□□ -2.3
SIP4	YJL089W	BSC4	P53841	131 aa		0.68	□□□□□ -2.3
SIP4	YJL089W	YNL122C	P53921	115 aa	Predicted RBP	0.68	□□□□□ -2.3
SIP4	YJL089W	YOL097W-A	Q3E7Y9	61 aa		0.68	□□□□□ -2.3
SIP4	YJL089W	YLR157W-D	P0CE99	70 aa		0.67	□□□□□ -2.3
SIP4	YJL089W	MSA2	P36157	363 aa		0.67	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms