RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C PBI2P0CT04 75 aaKnown RBP6.55□□□□□ -1.36
SSL2YIL143C HUR1P45820 110 aa6.54□□□□□ -1.36
SSL2YIL143C SPG4Q04438 115 aa6.54□□□□□ -1.36
SSL2YIL143C PEX22P39718 180 aa6.54□□□□□ -1.36
SSL2YIL143C QCR8P08525 94 aa6.53□□□□□ -1.36
SSL2YIL143C YGR039WP53225 103 aa6.53□□□□□ -1.36
SSL2YIL143C PBA1Q05778 276 aa6.53□□□□□ -1.36
SSL2YIL143C TAR1Q8TGM6 124 aa6.53□□□□□ -1.36
SSL2YIL143C YHR139C-AO13536 103 aa6.52□□□□□ -1.37
SSL2YIL143C YBL081WP38180 368 aaKnown RBP6.52□□□□□ -1.37
SSL2YIL143C RPL2AP0CX45 254 aaKnown RBP6.51□□□□□ -1.37
SSL2YIL143C RPL2BP0CX46 254 aaKnown RBP6.51□□□□□ -1.37
SSL2YIL143C YOR034C-AQ3E735 80 aa6.51□□□□□ -1.37
SSL2YIL143C YDR381C-AQ3E6R5 114 aa6.51□□□□□ -1.37
SSL2YIL143C KRE9P39005 276 aa6.5□□□□□ -1.37
SSL2YIL143C YMR295CQ03559 197 aa6.5□□□□□ -1.37
SSL2YIL143C PMP3P87284 55 aa6.5□□□□□ -1.37
SSL2YIL143C SRL1Q08673 210 aa6.5□□□□□ -1.37
SSL2YIL143C CWP2P43497 92 aa6.49□□□□□ -1.37
SSL2YIL143C YDR119W-AQ2V2P9 66 aa6.49□□□□□ -1.37
SSL2YIL143C RGM1Q00453 211 aa6.48□□□□□ -1.37
SSL2YIL143C COX12Q01519 83 aa6.48□□□□□ -1.37
SSL2YIL143C YCR041WP37265 110 aa6.47□□□□□ -1.37
SSL2YIL143C SVP26P38869 228 aa6.47□□□□□ -1.37
SSL2YIL143C ENV10Q99382 181 aa6.47□□□□□ -1.37
SSL2YIL143C UBC5P15732 148 aa6.47□□□□□ -1.37
SSL2YIL143C COF1Q03048 143 aaKnown RBP6.47□□□□□ -1.37
SSL2YIL143C YBR219CP38317 127 aa6.46□□□□□ -1.38
SSL2YIL143C Q0297Q9ZZV8 51 aa6.46□□□□□ -1.38
SSL2YIL143C TEL1P38110 2787 aa6.45□□□□□ -1.38
SSL2YIL143C SMP1P38128 452 aa6.45□□□□□ -1.38
SSL2YIL143C ARC15P40518 154 aaRIP-Chip data6.45□□□□□ -1.38not detected
SSL2YIL143C PPT2Q12036 173 aa6.45□□□□□ -1.38
SSL2YIL143C MSA2P36157 363 aa6.45□□□□□ -1.38
SSL2YIL143C MPC2P38857 129 aa6.45□□□□□ -1.38
SSL2YIL143C YLR415CO13578 112 aa6.44□□□□□ -1.38
SSL2YIL143C RPS11AP0CX47 156 aaKnown RBP6.44□□□□□ -1.38
SSL2YIL143C RPS11BP0CX48 156 aaKnown RBP6.44□□□□□ -1.38
SSL2YIL143C COX14P39103 70 aa6.44□□□□□ -1.38
SSL2YIL143C SFT1P43682 97 aa6.43□□□□□ -1.38
SSL2YIL143C HAL1Q01766 294 aa6.43□□□□□ -1.38
SSL2YIL143C YGL015CP33199 130 aa6.42□□□□□ -1.38
SSL2YIL143C YPS5P53057 165 aa6.42□□□□□ -1.38
SSL2YIL143C VAM10Q08474 114 aa6.42□□□□□ -1.38
SSL2YIL143C RAD6P06104 172 aa6.42□□□□□ -1.38
SSL2YIL143C YHL042WP38729 150 aa6.42□□□□□ -1.38
SSL2YIL143C RPR2P40571 144 aa6.42□□□□□ -1.38
SSL2YIL143C KNH1P50112 268 aa6.42□□□□□ -1.38
SSL2YIL143C YLL006W-AQ3E814 58 aa6.42□□□□□ -1.38
SSL2YIL143C YDR029WQ12111 104 aa6.41□□□□□ -1.38
SSL2YIL143C EMC6Q12431 108 aa6.4□□□□□ -1.39
SSL2YIL143C YOR020W-AQ3E824 90 aa6.39□□□□□ -1.39
SSL2YIL143C YAR029WP39549 74 aa6.39□□□□□ -1.39
SSL2YIL143C YLR236CA0A023PZG4 107 aa6.37□□□□□ -1.39
SSL2YIL143C SPT4P32914 102 aaPredicted RBP6.37□□□□□ -1.39
SSL2YIL143C PRP8P33334 2413 aaKnown RBP6.37□□□□□ -1.39
SSL2YIL143C YJR107C-AP0CT86 78 aa6.37□□□□□ -1.39
SSL2YIL143C YER175W-AQ8TGU4 54 aa6.37□□□□□ -1.39
SSL2YIL143C YHL018WP38744 120 aaPredicted RBP6.36□□□□□ -1.39
SSL2YIL143C SHH4Q06236 168 aa6.36□□□□□ -1.39
SSL2YIL143C YPL038W-AQ3E7B4 63 aa6.36□□□□□ -1.39
SSL2YIL143C MPC3P53311 146 aa6.35□□□□□ -1.39
SSL2YIL143C YRA2P36036 203 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
SSL2YIL143C IRC21Q04772 201 aa6.35□□□□□ -1.39
SSL2YIL143C YHR212W-AP0CX91 67 aa6.34□□□□□ -1.39
SSL2YIL143C YMR122W-AQ3E842 84 aa6.34□□□□□ -1.39
SSL2YIL143C YCR001WP25347 104 aa6.33□□□□□ -1.4
SSL2YIL143C RPB9P27999 122 aa6.33□□□□□ -1.4
SSL2YIL143C YSY6P38374 65 aa6.32□□□□□ -1.4
SSL2YIL143C EDC1P53080 175 aaPredicted RBP6.32□□□□□ -1.4
SSL2YIL143C YLR285C-AQ3E771 56 aa6.32□□□□□ -1.4
SSL2YIL143C YAL065CO13511 128 aa6.31□□□□□ -1.4
SSL2YIL143C ECM12O13529 151 aa6.31□□□□□ -1.4
SSL2YIL143C YNL277W-AQ3E7Z0 62 aa6.31□□□□□ -1.4
SSL2YIL143C YLR281CQ05863 155 aa6.3□□□□□ -1.4
SSL2YIL143C YER145C-AA0A023PYF4 145 aa6.29□□□□□ -1.4
SSL2YIL143C SBH1P52870 82 aa6.29□□□□□ -1.4
SSL2YIL143C TOM6P33448 61 aa6.29□□□□□ -1.4
SSL2YIL143C ATP18P81450 59 aa6.29□□□□□ -1.4
SSL2YIL143C ICY1Q04329 127 aa6.28□□□□□ -1.4
SSL2YIL143C YGR240C-AQ3E786 66 aa6.28□□□□□ -1.4
SSL2YIL143C CRC1Q12289 327 aa6.27□□□□□ -1.41
SSL2YIL143C MEC1P38111 2368 aa6.27□□□□□ -1.41
SSL2YIL143C YGL034CP53186 121 aa6.27□□□□□ -1.41
SSL2YIL143C YLR156WP0CE96 114 aa6.26□□□□□ -1.41
SSL2YIL143C YLR159WP0CE97 114 aa6.26□□□□□ -1.41
SSL2YIL143C YLR161WP0CE98 114 aa6.26□□□□□ -1.41
SSL2YIL143C ERI1P62651 68 aaKnown RBP6.26□□□□□ -1.41
SSL2YIL143C SMD1Q02260 146 aaPredicted RBP6.26□□□□□ -1.41
SSL2YIL143C RPL38P49167 78 aaKnown RBP6.25□□□□□ -1.41
SSL2YIL143C YMR175W-AQ3E766 64 aa6.25□□□□□ -1.41
SSL2YIL143C MVB12P42939 101 aa6.24□□□□□ -1.41
SSL2YIL143C YDR274CP87283 123 aa6.24□□□□□ -1.41
SSL2YIL143C YOR376W-AQ3E805 51 aa6.24□□□□□ -1.41
SSL2YIL143C YFR009W-AP0C5M9 85 aa6.23□□□□□ -1.41
SSL2YIL143C RPL29P05747 59 aaPredicted RBP6.22□□□□□ -1.41
SSL2YIL143C YER187WP40102 141 aa6.22□□□□□ -1.41
SSL2YIL143C GAT4P40569 121 aa6.22□□□□□ -1.41
SSL2YIL143C YAL064WP39711 94 aa6.21□□□□□ -1.42
SSL2YIL143C YDL241WQ07738 123 aa6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms