RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C RPR2P40571 144 aa4.76□□□□□ -1.65
YPT1YFL038C CWP2P43497 92 aa4.76□□□□□ -1.65
YPT1YFL038C RGM1Q00453 211 aa4.76□□□□□ -1.65
YPT1YFL038C CUP1-1P0CX80 61 aa4.75□□□□□ -1.65
YPT1YFL038C CUP1-2P0CX81 61 aa4.75□□□□□ -1.65
YPT1YFL038C RPA12P32529 125 aaKnown RBP4.75□□□□□ -1.65
YPT1YFL038C VAM10Q08474 114 aa4.75□□□□□ -1.65
YPT1YFL038C YCR001WP25347 104 aa4.74□□□□□ -1.65
YPT1YFL038C YCL042WP25572 119 aa4.74□□□□□ -1.65
YPT1YFL038C UBC11P52492 156 aa4.74□□□□□ -1.65
YPT1YFL038C YOR020W-AQ3E824 90 aa4.74□□□□□ -1.65
YPT1YFL038C ENV10Q99382 181 aa4.74□□□□□ -1.65
YPT1YFL038C NUM1Q00402 2748 aa4.74□□□□□ -1.65
YPT1YFL038C INO4P13902 151 aa4.73□□□□□ -1.65
YPT1YFL038C MRPL24P36525 258 aaPredicted RBP4.73□□□□□ -1.65
YPT1YFL038C ERG28P40030 148 aa4.73□□□□□ -1.65
YPT1YFL038C RDS3Q06835 107 aaPredicted RBP4.73□□□□□ -1.65
YPT1YFL038C YCR085WP25650 117 aa4.72□□□□□ -1.65
YPT1YFL038C DSE2P38844 325 aa4.72□□□□□ -1.65
YPT1YFL038C HUR1P45820 110 aa4.72□□□□□ -1.65
YPT1YFL038C CRC1Q12289 327 aa4.72□□□□□ -1.65
YPT1YFL038C ISD11Q6Q560 94 aa4.72□□□□□ -1.65
YPT1YFL038C YAL065CO13511 128 aa4.71□□□□□ -1.66
YPT1YFL038C SVP26P38869 228 aa4.71□□□□□ -1.66
YPT1YFL038C YMR175W-AQ3E766 64 aa4.71□□□□□ -1.66
YPT1YFL038C ABF2Q02486 183 aa4.7□□□□□ -1.66
YPT1YFL038C SGF11Q03067 99 aa4.7□□□□□ -1.66
YPT1YFL038C YDL241WQ07738 123 aa4.7□□□□□ -1.66
YPT1YFL038C YLL006W-AQ3E814 58 aa4.7□□□□□ -1.66
YPT1YFL038C MSA2P36157 363 aa4.69□□□□□ -1.66
YPT1YFL038C AIM19P40502 157 aa4.69□□□□□ -1.66
YPT1YFL038C YFL065CP43539 102 aa4.69□□□□□ -1.66
YPT1YFL038C YPR203WQ08994 102 aa4.69□□□□□ -1.66
YPT1YFL038C RPC10P40422 70 aa4.68□□□□□ -1.66
YPT1YFL038C HAL1Q01766 294 aa4.68□□□□□ -1.66
YPT1YFL038C YAL063C-AQ3E791 96 aa4.68□□□□□ -1.66
YPT1YFL038C YLR236CA0A023PZG4 107 aa4.67□□□□□ -1.66
YPT1YFL038C YPR010C-AA5Z2X5 72 aa4.67□□□□□ -1.66
YPT1YFL038C YLR281CQ05863 155 aa4.67□□□□□ -1.66
YPT1YFL038C YPL229WQ99395 206 aa4.67□□□□□ -1.66
YPT1YFL038C RPL33AP05744 107 aaKnown RBP4.66□□□□□ -1.66
YPT1YFL038C RPL29P05747 59 aaPredicted RBP4.66□□□□□ -1.66
YPT1YFL038C KRE1P17260 313 aa4.66□□□□□ -1.66
YPT1YFL038C RPL33BP41056 107 aaKnown RBP4.66□□□□□ -1.66
YPT1YFL038C SKI6P46948 246 aaPredicted RBP4.66□□□□□ -1.66
YPT1YFL038C YMR320WQ04897 101 aa4.66□□□□□ -1.66
YPT1YFL038C YDR381C-AQ3E6R5 114 aa4.66□□□□□ -1.66
YPT1YFL038C PBI2P0CT04 75 aaKnown RBP4.65□□□□□ -1.67
YPT1YFL038C KNH1P50112 268 aa4.65□□□□□ -1.67
YPT1YFL038C IRC21Q04772 201 aa4.65□□□□□ -1.67
YPT1YFL038C YFL041W-AQ3E817 63 aa4.65□□□□□ -1.67
YPT1YFL038C SPC1P46965 94 aa4.64□□□□□ -1.67
YPT1YFL038C ICY1Q04329 127 aa4.64□□□□□ -1.67
YPT1YFL038C PBA1Q05778 276 aa4.64□□□□□ -1.67
YPT1YFL038C YOR034C-AQ3E735 80 aa4.64□□□□□ -1.67
YPT1YFL038C MVB12P42939 101 aa4.63□□□□□ -1.67
YPT1YFL038C RPP2AP05319 106 aaKnown RBP4.61□□□□□ -1.67
YPT1YFL038C YJR107C-AP0CT86 78 aa4.61□□□□□ -1.67
YPT1YFL038C SMD1Q02260 146 aaPredicted RBP4.61□□□□□ -1.67
YPT1YFL038C YDR115WQ04598 105 aa4.61□□□□□ -1.67
YPT1YFL038C YHR139C-AO13536 103 aa4.6□□□□□ -1.67
YPT1YFL038C YBL081WP38180 368 aaKnown RBP4.6□□□□□ -1.67
YPT1YFL038C YLL066W-BQ8TGJ7 56 aa4.6□□□□□ -1.67
YPT1YFL038C AQY2P0CD90 149 aa4.59□□□□□ -1.67
YPT1YFL038C YAL064WP39711 94 aa4.59□□□□□ -1.67
YPT1YFL038C YFL019CP43576 117 aa4.59□□□□□ -1.67
YPT1YFL038C YNL184CP53876 108 aa4.59□□□□□ -1.67
YPT1YFL038C DIF1O13577 133 aa4.58□□□□□ -1.68
YPT1YFL038C STF1P01098 86 aa4.58□□□□□ -1.68
YPT1YFL038C YBL039W-BP0C268 59 aa4.58□□□□□ -1.68
YPT1YFL038C RTC6O14464 93 aa4.57□□□□□ -1.68
YPT1YFL038C UBC4P15731 148 aa4.57□□□□□ -1.68
YPT1YFL038C GAT4P40569 121 aa4.57□□□□□ -1.68
YPT1YFL038C MPC3P53311 146 aa4.57□□□□□ -1.68
YPT1YFL038C YNL162W-AQ3E7A8 72 aa4.57□□□□□ -1.68
YPT1YFL038C RPL26AP05743 127 aaKnown RBP4.55□□□□□ -1.68
YPT1YFL038C RPL26BP53221 127 aaKnown RBP4.55□□□□□ -1.68
YPT1YFL038C YLR122CQ12312 125 aa4.55□□□□□ -1.68
YPT1YFL038C EMC6Q12431 108 aa4.55□□□□□ -1.68
YPT1YFL038C UTP20P35194 2493 aaKnown RBP4.54□□□□□ -1.68
YPT1YFL038C RAD6P06104 172 aa4.54□□□□□ -1.68
YPT1YFL038C AUA1P32450 94 aa4.54□□□□□ -1.68
YPT1YFL038C SMP1P38128 452 aa4.54□□□□□ -1.68
YPT1YFL038C YHL042WP38729 150 aa4.54□□□□□ -1.68
YPT1YFL038C ATP18P81450 59 aa4.54□□□□□ -1.68
YPT1YFL038C SHH4Q06236 168 aa4.54□□□□□ -1.68
YPT1YFL038C YDR119W-AQ2V2P9 66 aa4.54□□□□□ -1.68
YPT1YFL038C FYV5P25585 152 aa4.52□□□□□ -1.69
YPT1YFL038C IGD1P43598 195 aa4.52□□□□□ -1.69
YPT1YFL038C SFT1P43682 97 aa4.52□□□□□ -1.69
YPT1YFL038C RSM19P53733 91 aaPredicted RBP4.52□□□□□ -1.69
YPT1YFL038C TSC3Q3E790 80 aa4.52□□□□□ -1.69
YPT1YFL038C RRT15Q3E811 62 aa4.52□□□□□ -1.69
YPT1YFL038C YAR1P46683 200 aa4.51□□□□□ -1.69
YPT1YFL038C YGR039WP53225 103 aa4.51□□□□□ -1.69
YPT1YFL038C COF1Q03048 143 aaKnown RBP4.51□□□□□ -1.69
YPT1YFL038C YBR230W-AQ3E762 66 aa4.51□□□□□ -1.69
YPT1YFL038C YLR307C-AQ3E825 87 aa4.51□□□□□ -1.69
YPT1YFL038C YAR023CD6VPM8 179 aa4.5□□□□□ -1.69
YPT1YFL038C YFR009W-AP0C5M9 85 aa4.5□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms