RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W GTT1P40582 234 aa0.15□□□□□ -2.39
YCK3YER123W MVB12P42939 101 aa0.15□□□□□ -2.39
YCK3YER123W LSM8P47093 109 aaKnown RBP0.15□□□□□ -2.39
YCK3YER123W YGR164WP53291 111 aa0.15□□□□□ -2.39
YCK3YER123W MRPS12P53732 153 aa0.15□□□□□ -2.39
YCK3YER123W SPC24Q04477 213 aa0.15□□□□□ -2.39
YCK3YER123W FRQ1Q06389 190 aa0.15□□□□□ -2.39
YCK3YER123W NAT5Q08689 176 aa0.15□□□□□ -2.39
YCK3YER123W YLR050CQ12155 161 aaKnown RBP0.15□□□□□ -2.39
YCK3YER123W YGL041C-BQ3E750 60 aa0.15□□□□□ -2.39
YCK3YER123W SLO1Q3E784 85 aa0.15□□□□□ -2.39
YCK3YER123W Q0017Q9ZZX8 53 aa0.15□□□□□ -2.39
YCK3YER123W RPL36BO14455 100 aaKnown RBP0.14□□□□□ -2.39
YCK3YER123W RPL36AP05745 100 aaPredicted RBP0.14□□□□□ -2.39
YCK3YER123W MRPL31P14063 131 aaPredicted RBP0.14□□□□□ -2.39
YCK3YER123W UBC5P15732 148 aa0.14□□□□□ -2.39
YCK3YER123W SEC59P20048 519 aa0.14□□□□□ -2.39
YCK3YER123W MRP17P28778 131 aa0.14□□□□□ -2.39
YCK3YER123W MRPL11P36521 249 aaPredicted RBP0.14□□□□□ -2.39
YCK3YER123W YHR173CP38864 112 aa0.14□□□□□ -2.39
YCK3YER123W GLC8P41818 229 aa0.14□□□□□ -2.39
YCK3YER123W EST3Q03096 181 aa0.14□□□□□ -2.39
YCK3YER123W PKR1Q03880 122 aaKnown RBP0.14□□□□□ -2.39
YCK3YER123W FCF2Q12035 217 aaPredicted RBP0.14□□□□□ -2.39
YCK3YER123W YOR008C-AQ3E7B9 74 aa0.14□□□□□ -2.39
YCK3YER123W YMR001C-AQ8TGS9 76 aa0.14□□□□□ -2.39
YCK3YER123W ATP5P09457 212 aa0.13□□□□□ -2.39
YCK3YER123W HMRA2P0CY13 119 aa0.13□□□□□ -2.39
YCK3YER123W PET54P10834 293 aa0.13□□□□□ -2.39
YCK3YER123W EMP24P32803 203 aaKnown RBP0.13□□□□□ -2.39
YCK3YER123W MRPL24P36525 258 aaPredicted RBP0.13□□□□□ -2.39
YCK3YER123W HSP10P38910 106 aa0.13□□□□□ -2.39
YCK3YER123W GCV3P39726 170 aaPredicted RBP0.13□□□□□ -2.39
YCK3YER123W PHS1P40857 217 aa0.13□□□□□ -2.39
YCK3YER123W VMA21P41806 77 aa0.13□□□□□ -2.39
YCK3YER123W MOG1P47123 218 aa0.13□□□□□ -2.39
YCK3YER123W YJR128WP47162 119 aa0.13□□□□□ -2.39
YCK3YER123W GIM5Q04493 163 aa0.13□□□□□ -2.39
YCK3YER123W NMA1Q06178 401 aaKnown RBP0.13□□□□□ -2.39
YCK3YER123W HPA2Q06592 156 aa0.13□□□□□ -2.39
YCK3YER123W YLR053CQ12026 108 aa0.13□□□□□ -2.39
YCK3YER123W COX19Q3E731 98 aa0.13□□□□□ -2.39
YCK3YER123W YOL097W-AQ3E7Y9 61 aa0.13□□□□□ -2.39
YCK3YER123W UBI4P0CG63 381 aaKnown RBP0.12□□□□□ -2.39
YCK3YER123W MRP49P32388 137 aa0.12□□□□□ -2.39
YCK3YER123W GSP1P32835 219 aaKnown RBP0.12□□□□□ -2.39
YCK3YER123W YBR090CP38253 122 aa0.12□□□□□ -2.39
YCK3YER123W TDA2P40045 126 aa0.12□□□□□ -2.39
YCK3YER123W HPM1P40481 377 aa0.12□□□□□ -2.39
YCK3YER123W GNA1P43577 159 aaPredicted RBP0.12□□□□□ -2.39
YCK3YER123W HUR1P45820 110 aa0.12□□□□□ -2.39
YCK3YER123W RPL38P49167 78 aaKnown RBP0.12□□□□□ -2.39
YCK3YER123W DIE2P50076 525 aa0.12□□□□□ -2.39
YCK3YER123W YNL019CP53975 284 aa0.12□□□□□ -2.39
YCK3YER123W YDR366CP87287 132 aa0.12□□□□□ -2.39
YCK3YER123W YPR153WQ06537 140 aa0.12□□□□□ -2.39
YCK3YER123W YOR385WQ08909 290 aa0.12□□□□□ -2.39
YCK3YER123W YLR363W-AQ3E747 85 aa0.12□□□□□ -2.39
YCK3YER123W NHP6AP11632 93 aaKnown RBP0.11□□□□□ -2.39
YCK3YER123W YBL071CP38185 102 aa0.11□□□□□ -2.39
YCK3YER123W LSM2P38203 95 aaKnown RBP0.11□□□□□ -2.39
YCK3YER123W SLM6P38343 150 aa0.11□□□□□ -2.39
YCK3YER123W YBR292CP38357 123 aa0.11□□□□□ -2.39
YCK3YER123W YHR138CP38841 114 aaPredicted RBP0.11□□□□□ -2.39
YCK3YER123W IMP2P46972 177 aa0.11□□□□□ -2.39
YCK3YER123W YGL204CP53089 101 aa0.11□□□□□ -2.39
YCK3YER123W YGR039WP53225 103 aa0.11□□□□□ -2.39
YCK3YER123W OLI1P61829 76 aa0.11□□□□□ -2.39
YCK3YER123W ERI1P62651 68 aaKnown RBP0.11□□□□□ -2.39
YCK3YER123W AIM11P87275 137 aa0.11□□□□□ -2.39
YCK3YER123W SAE3P89114 91 aa0.11□□□□□ -2.39
YCK3YER123W YIL014C-AQ02598 104 aa0.11□□□□□ -2.39
YCK3YER123W YLR296WQ05898 108 aa0.11□□□□□ -2.39
YCK3YER123W GPI11Q06636 219 aa0.11□□□□□ -2.39
YCK3YER123W POC4Q12245 148 aaPredicted RBP0.11□□□□□ -2.39
YCK3YER123W YDR119W-AQ2V2P9 66 aa0.11□□□□□ -2.39
YCK3YER123W CMC2Q3E7A4 109 aa0.11□□□□□ -2.39
YCK3YER123W YIL134C-AQ45U18 67 aa0.11□□□□□ -2.39
YCK3YER123W SCS22Q6Q595 175 aa0.11□□□□□ -2.39
YCK3YER123W PAU21P0CE86 164 aa0.11□□□□□ -2.39
YCK3YER123W PAU22P0CE87 164 aa0.11□□□□□ -2.39
YCK3YER123W ATG8P38182 117 aaRIP-Chip data0.11□□□□□ -2.39not detected
YCK3YER123W YBR032WP38223 100 aa0.11□□□□□ -2.39
YCK3YER123W AIM4P38305 123 aaPredicted RBP0.11□□□□□ -2.39
YCK3YER123W AME1P38313 324 aa0.11□□□□□ -2.39
YCK3YER123W YNL198CP40166 100 aa0.11□□□□□ -2.39
YCK3YER123W YIL163CP40448 117 aa0.11□□□□□ -2.39
YCK3YER123W CWP2P43497 92 aa0.11□□□□□ -2.39
YCK3YER123W RBL2P48606 106 aaKnown RBP0.11□□□□□ -2.39
YCK3YER123W EDC1P53080 175 aaPredicted RBP0.11□□□□□ -2.39
YCK3YER123W MRX7P53869 86 aa0.11□□□□□ -2.39
YCK3YER123W RPL22BP56628 122 aaKnown RBP0.11□□□□□ -2.39
YCK3YER123W YCL001W-AP87012 153 aa0.11□□□□□ -2.39
YCK3YER123W APS2Q00381 147 aa0.11□□□□□ -2.39
YCK3YER123W DYN2Q02647 92 aa0.11□□□□□ -2.39
YCK3YER123W GPI19Q04082 140 aa0.11□□□□□ -2.39
YCK3YER123W YMR082CQ04276 118 aa0.11□□□□□ -2.39
YCK3YER123W YLR118CQ12354 227 aa0.11□□□□□ -2.39
YCK3YER123W YDR381C-AQ3E6R5 114 aa0.11□□□□□ -2.39
YCK3YER123W YOR034C-AQ3E735 80 aa0.11□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms