RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	TOR2	P32600	2474 aa	Known RBP	2.7	□□□□□ -1.98
TRP4	YDR354W	RRT1	P38192	103 aa		2.7	□□□□□ -1.98
TRP4	YDR354W	YMR141C	P40211	102 aa		2.7	□□□□□ -1.98
TRP4	YDR354W	PIR5	P46999	287 aa		2.7	□□□□□ -1.98
TRP4	YDR354W	POP3	P53833	195 aa	Predicted RBP	2.7	□□□□□ -1.98
TRP4	YDR354W	FPR2	P32472	135 aa		2.69	□□□□□ -1.98
TRP4	YDR354W	YKR032W	P36127	104 aa		2.69	□□□□□ -1.98
TRP4	YDR354W	YAL064W	P39711	94 aa		2.69	□□□□□ -1.98
TRP4	YDR354W	YNL217W	P40152	326 aa		2.69	□□□□□ -1.98
TRP4	YDR354W	YFR035C	P43608	114 aa		2.69	□□□□□ -1.98
TRP4	YDR354W	SIP18	P50263	79 aa		2.69	□□□□□ -1.98
TRP4	YDR354W	YLR363W-A	Q3E747	85 aa		2.69	□□□□□ -1.98
TRP4	YDR354W	YOS1	Q3E834	85 aa		2.69	□□□□□ -1.98
TRP4	YDR354W	RPL39	P04650	51 aa		2.68	□□□□□ -1.98
TRP4	YDR354W	UBC4	P15731	148 aa		2.68	□□□□□ -1.98
TRP4	YDR354W	KRE1	P17260	313 aa		2.68	□□□□□ -1.98
TRP4	YDR354W	YKR045C	P36138	183 aa		2.68	□□□□□ -1.98
TRP4	YDR354W	YBL071C	P38185	102 aa		2.68	□□□□□ -1.98
TRP4	YDR354W	LST8	P41318	303 aa		2.68	□□□□□ -1.98
TRP4	YDR354W	YFL051C	P43552	160 aa		2.68	□□□□□ -1.98
TRP4	YDR354W	IMP2	P46972	177 aa		2.68	□□□□□ -1.98
TRP4	YDR354W	KSH1	Q8TGJ3	72 aa		2.68	□□□□□ -1.98
TRP4	YDR354W	YMR105W-A	Q8TGS8	64 aa		2.68	□□□□□ -1.98
TRP4	YDR354W	YHR213W	P0CI67	198 aa		2.67	□□□□□ -1.98
TRP4	YDR354W	YHL042W	P38729	150 aa		2.67	□□□□□ -1.98
TRP4	YDR354W	PAU7	P39545	55 aa		2.67	□□□□□ -1.98
TRP4	YDR354W	YEL067C	P39978	195 aa		2.67	□□□□□ -1.98
TRP4	YDR354W	YJL027C	P47063	138 aa	Predicted RBP	2.67	□□□□□ -1.98
TRP4	YDR354W	YIL014C-A	Q02598	104 aa		2.67	□□□□□ -1.98
TRP4	YDR354W	YIL102C-A	Q2V2P5	75 aa		2.67	□□□□□ -1.98
TRP4	YDR354W	YOR376W-A	Q3E805	51 aa		2.67	□□□□□ -1.98
TRP4	YDR354W	TEL1	P38110	2787 aa		2.66	□□□□□ -1.98
TRP4	YDR354W	PAI3	P01094	68 aa		2.66	□□□□□ -1.98
TRP4	YDR354W	YHR032W-A	P0C5N6	59 aa		2.66	□□□□□ -1.98
TRP4	YDR354W	KNH1	P50112	268 aa		2.66	□□□□□ -1.98
TRP4	YDR354W	YDR042C	Q03205	200 aa		2.66	□□□□□ -1.98
TRP4	YDR354W	YDL022C-A	P0C5L6	82 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	YKL044W	P36092	106 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	QCR10	P37299	77 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	SNF11	P38956	169 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	TDA2	P40045	126 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	MPC3	P53311	146 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	DAD4	P69851	72 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	SED1	Q01589	338 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	MGR2	Q02889	113 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	GPI19	Q04082	140 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	YLR296W	Q05898	108 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	YDR029W	Q12111	104 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	YKL023C-A	Q2V2P3	75 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	YOR381W-A	Q3E804	55 aa		2.65	□□□□□ -1.99
TRP4	YDR354W	SOM1	Q05676	74 aa		2.64	□□□□□ -1.99
TRP4	YDR354W	IRC23	Q08416	157 aa		2.64	□□□□□ -1.99
TRP4	YDR354W	MIC10	Q96VH5	97 aa		2.64	□□□□□ -1.99
TRP4	YDR354W	ECM12	O13529	151 aa		2.63	□□□□□ -1.99
TRP4	YDR354W	SPI1	P40092	148 aa		2.63	□□□□□ -1.99
TRP4	YDR354W	YNR077C	P53758	84 aa		2.63	□□□□□ -1.99
TRP4	YDR354W	YML079W	Q03629	201 aa		2.63	□□□□□ -1.99
TRP4	YDR354W	DAD1	Q12248	94 aa		2.63	□□□□□ -1.99
TRP4	YDR354W	COA3	Q3E7B2	85 aa		2.63	□□□□□ -1.99
TRP4	YDR354W	YLR342W-A	Q3E810	57 aa		2.63	□□□□□ -1.99
TRP4	YDR354W	YHL037C	P38733	133 aa		2.62	□□□□□ -1.99
TRP4	YDR354W	HUR1	P45820	110 aa		2.62	□□□□□ -1.99
TRP4	YDR354W	YGR025W	P53216	100 aa		2.62	□□□□□ -1.99
TRP4	YDR354W	RSM19	P53733	91 aa	Predicted RBP	2.62	□□□□□ -1.99
TRP4	YDR354W	RGM1	Q00453	211 aa		2.62	□□□□□ -1.99
TRP4	YDR354W	PRM3	Q08931	133 aa		2.62	□□□□□ -1.99
TRP4	YDR354W	PRP8	P33334	2413 aa	Known RBP	2.62	□□□□□ -1.99
TRP4	YDR354W	PFY1	P07274	126 aa		2.61	□□□□□ -1.99
TRP4	YDR354W	HMRA2	P0CY13	119 aa		2.6	□□□□□ -1.99
TRP4	YDR354W	INO4	P13902	151 aa		2.6	□□□□□ -1.99
TRP4	YDR354W	FYV5	P25585	152 aa		2.6	□□□□□ -1.99
TRP4	YDR354W	NRG2	P38082	220 aa		2.6	□□□□□ -1.99
TRP4	YDR354W	YPR013C	Q12145	317 aa		2.6	□□□□□ -1.99
TRP4	YDR354W	YCL048W-A	Q2V2Q2	79 aa		2.6	□□□□□ -1.99
TRP4	YDR354W	MRPL38	P35996	138 aa	Predicted RBP	2.59	□□□□□ -1.99
TRP4	YDR354W	YHL018W	P38744	120 aa	Predicted RBP	2.59	□□□□□ -1.99
TRP4	YDR354W	TOS6	P48560	102 aa		2.59	□□□□□ -1.99
TRP4	YDR354W	YDL241W	Q07738	123 aa		2.59	□□□□□ -1.99
TRP4	YDR354W	YBR209W	P38311	105 aa		2.58	□□□□□ -2
TRP4	YDR354W	RPL33B	P41056	107 aa	Known RBP	2.58	□□□□□ -2
TRP4	YDR354W	YOR268C	Q08734	132 aa		2.58	□□□□□ -2
TRP4	YDR354W	YLR236C	A0A023PZG4	107 aa		2.57	□□□□□ -2
TRP4	YDR354W	YER187W	P40102	141 aa		2.57	□□□□□ -2
TRP4	YDR354W	YPL261C	Q08976	102 aa		2.57	□□□□□ -2
TRP4	YDR354W	MEC1	P38111	2368 aa		2.56	□□□□□ -2
TRP4	YDR354W	NHP2	P32495	156 aa	Predicted RBP	2.56	□□□□□ -2
TRP4	YDR354W	RPA12	P32529	125 aa	Known RBP	2.56	□□□□□ -2
TRP4	YDR354W	YHR022C	P38763	256 aa		2.56	□□□□□ -2
TRP4	YDR354W	YFL065C	P43539	102 aa		2.56	□□□□□ -2
TRP4	YDR354W	MRPS12	P53732	153 aa		2.56	□□□□□ -2
TRP4	YDR354W	LSM6	Q06406	86 aa	Known RBP	2.56	□□□□□ -2
TRP4	YDR354W	YPR153W	Q06537	140 aa		2.56	□□□□□ -2
TRP4	YDR354W	YPR203W	Q08994	102 aa		2.56	□□□□□ -2
TRP4	YDR354W	YCR085W	P25650	117 aa		2.55	□□□□□ -2
TRP4	YDR354W	SVP26	P38869	228 aa		2.55	□□□□□ -2
TRP4	YDR354W	POR2	P40478	281 aa		2.55	□□□□□ -2
TRP4	YDR354W	DCV1	P43595	202 aa		2.55	□□□□□ -2
TRP4	YDR354W	YNL190W	P53872	204 aa		2.55	□□□□□ -2
TRP4	YDR354W	YBR200W-A	Q3E755	54 aa		2.55	□□□□□ -2
TRP4	YDR354W	YBR056W-A	I2HB52	66 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms