RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	CYR1	P08678	2026 aa	Known RBP	4.2	□□□□□ -1.74
TRP1	YDR007W	CDC39	P25655	2108 aa	Known RBP	4.19	□□□□□ -1.74
TRP1	YDR007W	VTC1	P40046	129 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
TRP1	YDR007W	PEX17	P40155	199 aa		4.19	□□□□□ -1.74
TRP1	YDR007W	YMR295C	Q03559	197 aa		4.19	□□□□□ -1.74
TRP1	YDR007W	MSA2	P36157	363 aa		4.18	□□□□□ -1.74
TRP1	YDR007W	AIM4	P38305	123 aa	Predicted RBP	4.18	□□□□□ -1.74
TRP1	YDR007W	HUA1	P40325	198 aa		4.18	□□□□□ -1.74
TRP1	YDR007W	YLR342W-A	Q3E810	57 aa		4.18	□□□□□ -1.74
TRP1	YDR007W	YDL022C-A	P0C5L6	82 aa		4.17	□□□□□ -1.74
TRP1	YDR007W	YHR214C-D	P0CX93	97 aa		4.17	□□□□□ -1.74
TRP1	YDR007W	YBL071C	P38185	102 aa		4.17	□□□□□ -1.74
TRP1	YDR007W	GAT4	P40569	121 aa		4.17	□□□□□ -1.74
TRP1	YDR007W	YFL019C	P43576	117 aa		4.17	□□□□□ -1.74
TRP1	YDR007W	HUR1	P45820	110 aa		4.17	□□□□□ -1.74
TRP1	YDR007W	YHR213W	P0CI67	198 aa		4.16	□□□□□ -1.74
TRP1	YDR007W	RSM18	P40033	138 aa		4.16	□□□□□ -1.74
TRP1	YDR007W	PIR5	P46999	287 aa		4.16	□□□□□ -1.74
TRP1	YDR007W	YLR285C-A	Q3E771	56 aa		4.16	□□□□□ -1.74
TRP1	YDR007W	YOR008C-A	Q3E7B9	74 aa		4.16	□□□□□ -1.74
TRP1	YDR007W	MIC10	Q96VH5	97 aa		4.16	□□□□□ -1.74
TRP1	YDR007W	YBR209W	P38311	105 aa		4.15	□□□□□ -1.75
TRP1	YDR007W	ICY1	Q04329	127 aa		4.15	□□□□□ -1.75
TRP1	YDR007W	TDA8	Q6B2U8	126 aa		4.15	□□□□□ -1.75
TRP1	YDR007W	ATP20	Q12233	115 aa		4.14	□□□□□ -1.75
TRP1	YDR007W	YSF3	P0C074	85 aa	Predicted RBP	4.13	□□□□□ -1.75
TRP1	YDR007W	YMR141C	P40211	102 aa		4.13	□□□□□ -1.75
TRP1	YDR007W	ICS3	P47034	131 aa		4.13	□□□□□ -1.75
TRP1	YDR007W	YOR314W	Q12506	109 aa		4.13	□□□□□ -1.75
TRP1	YDR007W	YDR246W-A	Q3E763	66 aa		4.13	□□□□□ -1.75
TRP1	YDR007W	YAL065C	O13511	128 aa		4.12	□□□□□ -1.75
TRP1	YDR007W	YKL065W-A	Q2V2P2	73 aa		4.12	□□□□□ -1.75
TRP1	YDR007W	RRT15	Q3E811	62 aa		4.12	□□□□□ -1.75
TRP1	YDR007W	VPS13	Q07878	3144 aa		4.12	□□□□□ -1.75
TRP1	YDR007W	YLR156W	P0CE96	114 aa		4.11	□□□□□ -1.75
TRP1	YDR007W	YLR159W	P0CE97	114 aa		4.11	□□□□□ -1.75
TRP1	YDR007W	YLR161W	P0CE98	114 aa		4.11	□□□□□ -1.75
TRP1	YDR007W	YKR045C	P36138	183 aa		4.11	□□□□□ -1.75
TRP1	YDR007W	IRC21	Q04772	201 aa		4.11	□□□□□ -1.75
TRP1	YDR007W	RPL26A	P05743	127 aa	Known RBP	4.1	□□□□□ -1.75
TRP1	YDR007W	QCR8	P08525	94 aa		4.1	□□□□□ -1.75
TRP1	YDR007W	RPS23A	P0CX29	145 aa	Known RBP	4.1	□□□□□ -1.75
TRP1	YDR007W	RPS23B	P0CX30	145 aa		4.1	□□□□□ -1.75
TRP1	YDR007W	ATP15	P21306	62 aa		4.1	□□□□□ -1.75
TRP1	YDR007W	TDA2	P40045	126 aa		4.1	□□□□□ -1.75
TRP1	YDR007W	IMP2	P46972	177 aa		4.1	□□□□□ -1.75
TRP1	YDR007W	MRPS12	P53732	153 aa		4.1	□□□□□ -1.75
TRP1	YDR007W	TSC3	Q3E790	80 aa		4.1	□□□□□ -1.75
TRP1	YDR007W	YDR182W-A	Q3E796	67 aa		4.1	□□□□□ -1.75
TRP1	YDR007W	YOR381W-A	Q3E804	55 aa		4.1	□□□□□ -1.75
TRP1	YDR007W	SHU1	P38751	150 aa		4.09	□□□□□ -1.75
TRP1	YDR007W	YHL005C	P38752	130 aa		4.09	□□□□□ -1.75
TRP1	YDR007W	SPG1	P50088	95 aa		4.09	□□□□□ -1.75
TRP1	YDR007W	MPC3	P53311	146 aa		4.09	□□□□□ -1.75
TRP1	YDR007W	ERI1	P62651	68 aa	Known RBP	4.09	□□□□□ -1.75
TRP1	YDR007W	YDR274C	P87283	123 aa		4.09	□□□□□ -1.75
TRP1	YDR007W	YDR114C	Q04597	100 aa		4.09	□□□□□ -1.75
TRP1	YDR007W	PRM7	Q12459	698 aa		4.09	□□□□□ -1.75
TRP1	YDR007W	YOR020W-A	Q3E824	90 aa		4.09	□□□□□ -1.75
TRP1	YDR007W	RPL36B	O14455	100 aa	Known RBP	4.08	□□□□□ -1.76
TRP1	YDR007W	RPL36A	P05745	100 aa	Predicted RBP	4.08	□□□□□ -1.76
TRP1	YDR007W	HSP150	P32478	413 aa		4.08	□□□□□ -1.76
TRP1	YDR007W	YNL190W	P53872	204 aa		4.08	□□□□□ -1.76
TRP1	YDR007W	YLR162W	Q06235	118 aa		4.08	□□□□□ -1.76
TRP1	YDR007W	YOR268C	Q08734	132 aa		4.08	□□□□□ -1.76
TRP1	YDR007W	RRT1	P38192	103 aa		4.07	□□□□□ -1.76
TRP1	YDR007W	YFR035C	P43608	114 aa		4.07	□□□□□ -1.76
TRP1	YDR007W	YPR195C	Q06594	109 aa		4.07	□□□□□ -1.76
TRP1	YDR007W	YJR107C-A	P0CT86	78 aa		4.06	□□□□□ -1.76
TRP1	YDR007W	RPL26B	P53221	127 aa	Known RBP	4.06	□□□□□ -1.76
TRP1	YDR007W	RGM1	Q00453	211 aa		4.06	□□□□□ -1.76
TRP1	YDR007W	YDL012C	Q12489	107 aa		4.06	□□□□□ -1.76
TRP1	YDR007W	YGR121W-A	Q3E816	71 aa		4.06	□□□□□ -1.76
TRP1	YDR007W	YML100W-A	Q8TGT0	57 aa		4.06	□□□□□ -1.76
TRP1	YDR007W	TAO3	P40468	2376 aa		4.06	□□□□□ -1.76
TRP1	YDR007W	FPR1	P20081	114 aa	Known RBP	4.05	□□□□□ -1.76
TRP1	YDR007W	ARC15	P40518	154 aa	RIP-Chip data	4.05	□□□□□ -1.76	not detected
TRP1	YDR007W	YGL193C	P53097	103 aa		4.04	□□□□□ -1.76
TRP1	YDR007W	YOR376W-A	Q3E805	51 aa		4.03	□□□□□ -1.76
TRP1	YDR007W	OST5	Q92316	86 aa		4.03	□□□□□ -1.76
TRP1	YDR007W	YLR236C	A0A023PZG4	107 aa		4.02	□□□□□ -1.77
TRP1	YDR007W	RPS27A	P35997	82 aa	Known RBP	4.02	□□□□□ -1.77
TRP1	YDR007W	RPS27B	P38711	82 aa		4.02	□□□□□ -1.77
TRP1	YDR007W	YJR146W	P47174	117 aa		4.02	□□□□□ -1.77
TRP1	YDR007W	YGL088W	P53151	121 aa		4.02	□□□□□ -1.77
TRP1	YDR007W	ATP18	P81450	59 aa		4.02	□□□□□ -1.77
TRP1	YDR007W	YER188C-A	P0C0V2	99 aa		4.01	□□□□□ -1.77
TRP1	YDR007W	YHR125W	P38831	101 aa		4.01	□□□□□ -1.77
TRP1	YDR007W	YER084W	P40057	128 aa		4.01	□□□□□ -1.77
TRP1	YDR007W	YMR122C	Q03879	124 aa		4.01	□□□□□ -1.77
TRP1	YDR007W	YIR020C	P40575	100 aa		4	□□□□□ -1.77
TRP1	YDR007W	YGR035W-A	Q45U48	73 aa		4	□□□□□ -1.77
TRP1	YDR007W	NOP10	Q6Q547	58 aa	Predicted RBP	4	□□□□□ -1.77
TRP1	YDR007W	EDC1	P53080	175 aa	Predicted RBP	3.99	□□□□□ -1.77
TRP1	YDR007W	YHL037C	P38733	133 aa		3.97	□□□□□ -1.77
TRP1	YDR007W	YJL027C	P47063	138 aa	Predicted RBP	3.97	□□□□□ -1.77
TRP1	YDR007W	RPL38	P49167	78 aa	Known RBP	3.97	□□□□□ -1.77
TRP1	YDR007W	SED1	Q01589	338 aa		3.97	□□□□□ -1.77
TRP1	YDR007W	YOL166W-A	Q8TGJ1	51 aa		3.97	□□□□□ -1.77
TRP1	YDR007W	RPS30A	P0CX33	63 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms