RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C HSP150P32478 413 aa5.44□□□□□ -1.54
CDC13YDL220C CRC1Q12289 327 aa5.44□□□□□ -1.54
CDC13YDL220C SEN1Q00416 2231 aaKnown RBP5.44□□□□□ -1.54
CDC13YDL220C YAL064WP39711 94 aa5.44□□□□□ -1.54
CDC13YDL220C POL2P21951 2222 aaKnown RBP5.44□□□□□ -1.54
CDC13YDL220C YML100W-AQ8TGT0 57 aa5.44□□□□□ -1.54
CDC13YDL220C HHF1P02309 103 aaKnown RBP5.43□□□□□ -1.54
CDC13YDL220C AIR2Q12476 344 aaKnown RBP5.43□□□□□ -1.54
CDC13YDL220C NOP10Q6Q547 58 aaPredicted RBP5.43□□□□□ -1.54
CDC13YDL220C ARF1P11076 181 aaKnown RBP5.43□□□□□ -1.54
CDC13YDL220C YGR018CP53211 109 aa5.43□□□□□ -1.54
CDC13YDL220C YLR162WQ06235 118 aa5.43□□□□□ -1.54
CDC13YDL220C YOR008C-AQ3E7B9 74 aa5.43□□□□□ -1.54
CDC13YDL220C IRC21Q04772 201 aa5.42□□□□□ -1.54
CDC13YDL220C YOL160WQ08321 113 aa5.42□□□□□ -1.54
CDC13YDL220C YBR144CP34215 104 aa5.42□□□□□ -1.54
CDC13YDL220C SHU1P38751 150 aa5.42□□□□□ -1.54
CDC13YDL220C SED1Q01589 338 aa5.42□□□□□ -1.54
CDC13YDL220C COX17Q12287 69 aa5.42□□□□□ -1.54
CDC13YDL220C SRL1Q08673 210 aa5.41□□□□□ -1.54
CDC13YDL220C YOR314WQ12506 109 aa5.41□□□□□ -1.54
CDC13YDL220C SAP30P38429 201 aa5.41□□□□□ -1.54
CDC13YDL220C TRS23Q03784 219 aa5.4□□□□□ -1.54
CDC13YDL220C TSC3Q3E790 80 aa5.4□□□□□ -1.54
CDC13YDL220C YMR122CQ03879 124 aa5.4□□□□□ -1.55
CDC13YDL220C YBL071CP38185 102 aa5.39□□□□□ -1.55
CDC13YDL220C YHL005CP38752 130 aa5.38□□□□□ -1.55
CDC13YDL220C YDR114CQ04597 100 aa5.38□□□□□ -1.55
CDC13YDL220C YSF3P0C074 85 aaPredicted RBP5.37□□□□□ -1.55
CDC13YDL220C DDR48P18899 430 aaKnown RBP5.37□□□□□ -1.55
CDC13YDL220C REE1P40893 198 aa5.37□□□□□ -1.55
CDC13YDL220C YGR035W-AQ45U48 73 aa5.37□□□□□ -1.55
CDC13YDL220C OST5Q92316 86 aa5.37□□□□□ -1.55
CDC13YDL220C YER188C-AP0C0V2 99 aa5.36□□□□□ -1.55
CDC13YDL220C URM1P40554 99 aaPredicted RBP5.36□□□□□ -1.55
CDC13YDL220C RPL38P49167 78 aaKnown RBP5.36□□□□□ -1.55
CDC13YDL220C YGL088WP53151 121 aa5.36□□□□□ -1.55
CDC13YDL220C YPR117WQ06116 2489 aa5.36□□□□□ -1.55
CDC13YDL220C YER135CP40082 130 aa5.36□□□□□ -1.55
CDC13YDL220C YLR342W-AQ3E810 57 aa5.36□□□□□ -1.55
CDC13YDL220C HOT13P36078 116 aa5.35□□□□□ -1.55
CDC13YDL220C ARC15P40518 154 aaRIP-Chip data5.35□□□□□ -1.55not detected
CDC13YDL220C SPG4Q04438 115 aa5.35□□□□□ -1.55
CDC13YDL220C YJR107C-AP0CT86 78 aa5.35□□□□□ -1.55
CDC13YDL220C RPS27AP35997 82 aaKnown RBP5.35□□□□□ -1.55
CDC13YDL220C RPS27BP38711 82 aa5.35□□□□□ -1.55
CDC13YDL220C YGL193CP53097 103 aa5.35□□□□□ -1.55
CDC13YDL220C MPC3P53311 146 aa5.35□□□□□ -1.55
CDC13YDL220C YPR153WQ06537 140 aa5.34□□□□□ -1.55
CDC13YDL220C FAB1P34756 2278 aa5.34□□□□□ -1.55
CDC13YDL220C CCW14O13547 238 aa5.34□□□□□ -1.55
CDC13YDL220C RPS30AP0CX33 63 aaKnown RBP5.33□□□□□ -1.56
CDC13YDL220C RPS30BP0CX34 63 aaKnown RBP5.33□□□□□ -1.56
CDC13YDL220C YIR020CP40575 100 aa5.33□□□□□ -1.56
CDC13YDL220C GLT1Q12680 2145 aaKnown RBP5.33□□□□□ -1.56
CDC13YDL220C YOR020W-AQ3E824 90 aa5.33□□□□□ -1.56
CDC13YDL220C YOL166W-AQ8TGJ1 51 aa5.33□□□□□ -1.56
CDC13YDL220C YFL015CP43578 164 aa5.33□□□□□ -1.56
CDC13YDL220C YDR524C-BQ3E6R4 66 aa5.33□□□□□ -1.56
CDC13YDL220C IRA2P19158 3079 aa5.32□□□□□ -1.56
CDC13YDL220C VPS13Q07878 3144 aa5.32□□□□□ -1.56
CDC13YDL220C RPS23AP0CX29 145 aaKnown RBP5.32□□□□□ -1.56
CDC13YDL220C RPS23BP0CX30 145 aa5.32□□□□□ -1.56
CDC13YDL220C RGM1Q00453 211 aa5.32□□□□□ -1.56
CDC13YDL220C RPL36BO14455 100 aaKnown RBP5.31□□□□□ -1.56
CDC13YDL220C RPL36AP05745 100 aaPredicted RBP5.31□□□□□ -1.56
CDC13YDL220C RNH203Q12338 110 aa5.3□□□□□ -1.56
CDC13YDL220C YJL027CP47063 138 aaPredicted RBP5.29□□□□□ -1.56
CDC13YDL220C YJR146WP47174 117 aa5.29□□□□□ -1.56
CDC13YDL220C YOR032W-AQ8TGS1 66 aa5.29□□□□□ -1.56
CDC13YDL220C RPR2P40571 144 aa5.28□□□□□ -1.56
CDC13YDL220C FYV5P25585 152 aa5.27□□□□□ -1.57
CDC13YDL220C YKL065W-AQ2V2P2 73 aa5.27□□□□□ -1.57
CDC13YDL220C YGR025WP53216 100 aa5.27□□□□□ -1.57
CDC13YDL220C YDR182W-AQ3E796 67 aa5.27□□□□□ -1.57
CDC13YDL220C TAO3P40468 2376 aa5.26□□□□□ -1.57
CDC13YDL220C YOL085CQ99345 113 aa5.26□□□□□ -1.57
CDC13YDL220C RRT1P38192 103 aa5.25□□□□□ -1.57
CDC13YDL220C YLR236CA0A023PZG4 107 aa5.25□□□□□ -1.57
CDC13YDL220C YER145C-AA0A023PYF4 145 aa5.24□□□□□ -1.57
CDC13YDL220C YGL015CP33199 130 aa5.24□□□□□ -1.57
CDC13YDL220C YIL156W-BQ2V2P4 73 aa5.24□□□□□ -1.57
CDC13YDL220C RPB10P22139 70 aa5.24□□□□□ -1.57
CDC13YDL220C QCR8P08525 94 aa5.23□□□□□ -1.57
CDC13YDL220C ATP18P81450 59 aa5.23□□□□□ -1.57
CDC13YDL220C YHL037CP38733 133 aa5.23□□□□□ -1.57
CDC13YDL220C YPS5P53057 165 aa5.23□□□□□ -1.57
CDC13YDL220C SPC1P46965 94 aa5.22□□□□□ -1.57
CDC13YDL220C SPG1P50088 95 aa5.22□□□□□ -1.57
CDC13YDL220C YFR009W-AP0C5M9 85 aa5.21□□□□□ -1.57
CDC13YDL220C YDR010CQ12426 110 aa5.21□□□□□ -1.58
CDC13YDL220C YEL008WP40001 126 aa5.21□□□□□ -1.58
CDC13YDL220C UTH1P36135 365 aa5.2□□□□□ -1.58
CDC13YDL220C FPR1P20081 114 aaKnown RBP5.19□□□□□ -1.58
CDC13YDL220C YMR244WQ04018 355 aa5.19□□□□□ -1.58
CDC13YDL220C YIL102CP40488 101 aa5.18□□□□□ -1.58
CDC13YDL220C POR2P40478 281 aa5.18□□□□□ -1.58
CDC13YDL220C YGR045CP53229 120 aa5.17□□□□□ -1.58
CDC13YDL220C LIP1Q03579 150 aa5.17□□□□□ -1.58
CDC13YDL220C YPR013CQ12145 317 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms