RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C HUA1P40325 198 aa1.59□□□□□ -2.15
RRP42YDL111C YFR035CP43608 114 aa1.59□□□□□ -2.15
RRP42YDL111C PAU4P53427 120 aa1.59□□□□□ -2.15
RRP42YDL111C YLR363W-AQ3E747 85 aa1.59□□□□□ -2.15
RRP42YDL111C SLH1P53327 1967 aaKnown RBP1.59□□□□□ -2.16
RRP42YDL111C TY4B-HP0C2J7 1802 aa1.59□□□□□ -2.16
RRP42YDL111C TY4B-JP47024 1803 aa1.59□□□□□ -2.16
RRP42YDL111C MYO1P08964 1928 aa1.58□□□□□ -2.16
RRP42YDL111C RPS22AP0C0W1 130 aaKnown RBP1.58□□□□□ -2.16
RRP42YDL111C PAU1P0CE88 120 aa1.58□□□□□ -2.16
RRP42YDL111C PAU14P0CE89 120 aa1.58□□□□□ -2.16
RRP42YDL111C PAU6P0CE90 120 aa1.58□□□□□ -2.16
RRP42YDL111C PAU18P0CE91 120 aa1.58□□□□□ -2.16
RRP42YDL111C PAU8P0CE92 120 aa1.58□□□□□ -2.16
RRP42YDL111C PAU11P0CE93 120 aa1.58□□□□□ -2.16
RRP42YDL111C AIM4P38305 123 aaPredicted RBP1.58□□□□□ -2.16
RRP42YDL111C ATX1P38636 73 aa1.58□□□□□ -2.16
RRP42YDL111C PAU13P38725 120 aa1.58□□□□□ -2.16
RRP42YDL111C MIC27P50945 234 aa1.58□□□□□ -2.16
RRP42YDL111C PAU10Q03050 120 aa1.58□□□□□ -2.16
RRP42YDL111C PAU20Q08322 120 aa1.58□□□□□ -2.16
RRP42YDL111C PAU9Q3E770 120 aa1.58□□□□□ -2.16
RRP42YDL111C RPS22BQ3E7Y3 130 aaKnown RBP1.58□□□□□ -2.16
RRP42YDL111C TY1B-NL2Q99337 1749 aaKnown RBP1.57□□□□□ -2.16
RRP42YDL111C YSF3P0C074 85 aaPredicted RBP1.57□□□□□ -2.16
RRP42YDL111C YBR090CP38253 122 aa1.57□□□□□ -2.16
RRP42YDL111C YLR194CQ05777 254 aa1.57□□□□□ -2.16
RRP42YDL111C YIL102C-AQ2V2P5 75 aa1.57□□□□□ -2.16
RRP42YDL111C GSC2P40989 1895 aa1.56□□□□□ -2.16
RRP42YDL111C CYB5P40312 120 aa1.56□□□□□ -2.16
RRP42YDL111C YIL014C-AQ02598 104 aa1.56□□□□□ -2.16
RRP42YDL111C YOR105WQ08504 108 aa1.56□□□□□ -2.16
RRP42YDL111C YPL261CQ08976 102 aa1.56□□□□□ -2.16
RRP42YDL111C FKS3Q04952 1785 aa1.56□□□□□ -2.16
RRP42YDL111C NHP2P32495 156 aaPredicted RBP1.55□□□□□ -2.16
RRP42YDL111C YNL198CP40166 100 aa1.55□□□□□ -2.16
RRP42YDL111C MGR2Q02889 113 aa1.55□□□□□ -2.16
RRP42YDL111C YMR082CQ04276 118 aa1.55□□□□□ -2.16
RRP42YDL111C YMR090WQ04304 227 aaKnown RBP1.55□□□□□ -2.16
RRP42YDL111C YKL023C-AQ2V2P3 75 aa1.55□□□□□ -2.16
RRP42YDL111C YOS1Q3E834 85 aa1.55□□□□□ -2.16
RRP42YDL111C OST5Q92316 86 aa1.55□□□□□ -2.16
RRP42YDL111C BNI1P41832 1953 aa1.55□□□□□ -2.16
RRP42YDL111C LAA1P39526 2014 aa1.54□□□□□ -2.16
RRP42YDL111C YER039C-AP0CD97 72 aa1.54□□□□□ -2.16
RRP42YDL111C HMRA1P0CY11 126 aa1.54□□□□□ -2.16
RRP42YDL111C QCR9P22289 66 aa1.54□□□□□ -2.16
RRP42YDL111C DAD1Q12248 94 aa1.54□□□□□ -2.16
RRP42YDL111C YLR365WQ7LIF2 110 aa1.54□□□□□ -2.16
RRP42YDL111C RIM15P43565 1770 aa1.54□□□□□ -2.16
RRP42YDL111C ECM12O13529 151 aa1.53□□□□□ -2.16
RRP42YDL111C YJL197C-AP0C5P0 93 aa1.53□□□□□ -2.16
RRP42YDL111C YCR085WP25650 117 aa1.53□□□□□ -2.16
RRP42YDL111C YER187WP40102 141 aa1.53□□□□□ -2.16
RRP42YDL111C YIL163CP40448 117 aa1.53□□□□□ -2.16
RRP42YDL111C HKR1P41809 1802 aa1.53□□□□□ -2.16
RRP42YDL111C COX12Q01519 83 aa1.53□□□□□ -2.16
RRP42YDL111C FIT3Q08907 204 aa1.53□□□□□ -2.16
RRP42YDL111C UBC5P15732 148 aa1.52□□□□□ -2.17
RRP42YDL111C RPA12P32529 125 aaKnown RBP1.52□□□□□ -2.17
RRP42YDL111C MVB12P42939 101 aa1.52□□□□□ -2.17
RRP42YDL111C CWP2P43497 92 aa1.52□□□□□ -2.17
RRP42YDL111C YFL041W-AQ3E817 63 aa1.52□□□□□ -2.17
RRP42YDL111C ENV10Q99382 181 aa1.52□□□□□ -2.17
RRP42YDL111C TOM6P33448 61 aa1.51□□□□□ -2.17
RRP42YDL111C HHY1P39982 102 aa1.51□□□□□ -2.17
RRP42YDL111C RPL37AP49166 88 aaKnown RBP1.51□□□□□ -2.17
RRP42YDL111C YGR164WP53291 111 aa1.51□□□□□ -2.17
RRP42YDL111C YMR103CQ04436 120 aa1.51□□□□□ -2.17
RRP42YDL111C COA2Q3E823 68 aa1.51□□□□□ -2.17
RRP42YDL111C FLO1P32768 1537 aa1.5□□□□□ -2.17
RRP42YDL111C TIM12P32830 109 aa1.5□□□□□ -2.17
RRP42YDL111C SRX1P36077 127 aa1.5□□□□□ -2.17
RRP42YDL111C PAU7P39545 55 aa1.5□□□□□ -2.17
RRP42YDL111C YDR029WQ12111 104 aa1.5□□□□□ -2.17
RRP42YDL111C YHR213W-BQ8TGK1 99 aa1.5□□□□□ -2.17
RRP42YDL111C YRF1-3P0CX14 1859 aa1.5□□□□□ -2.17
RRP42YDL111C YRF1-7P0CX15 1859 aa1.5□□□□□ -2.17
RRP42YDL111C YRF1-6P53819 1859 aa1.5□□□□□ -2.17
RRP42YDL111C HFA1P32874 2273 aa1.49□□□□□ -2.17
RRP42YDL111C FPR2P32472 135 aa1.49□□□□□ -2.17
RRP42YDL111C COX23P38824 151 aa1.49□□□□□ -2.17
RRP42YDL111C YHR173CP38864 112 aa1.49□□□□□ -2.17
RRP42YDL111C YDR042CQ03205 200 aa1.49□□□□□ -2.17
RRP42YDL111C LSM6Q06406 86 aaKnown RBP1.49□□□□□ -2.17
RRP42YDL111C POC4Q12245 148 aaPredicted RBP1.49□□□□□ -2.17
RRP42YDL111C YLR285C-AQ3E771 56 aa1.49□□□□□ -2.17
RRP42YDL111C YPR108W-AQ3E7B3 70 aa1.49□□□□□ -2.17
RRP42YDL111C YPL038W-AQ3E7B4 63 aa1.49□□□□□ -2.17
RRP42YDL111C FIG2P25653 1609 aa1.48□□□□□ -2.17
RRP42YDL111C POR2P40478 281 aa1.48□□□□□ -2.17
RRP42YDL111C YDR119W-AQ2V2P9 66 aa1.48□□□□□ -2.17
RRP42YDL111C HUG1Q6Q5K6 68 aa1.48□□□□□ -2.17
RRP42YDL111C STT4P37297 1900 aa1.48□□□□□ -2.17
RRP42YDL111C MRPL31P14063 131 aaPredicted RBP1.47□□□□□ -2.17
RRP42YDL111C RSM19P53733 91 aaPredicted RBP1.47□□□□□ -2.17
RRP42YDL111C YGL258W-AQ3E740 77 aa1.47□□□□□ -2.17
RRP42YDL111C YGL041C-BQ3E750 60 aa1.47□□□□□ -2.17
RRP42YDL111C KSH1Q8TGJ3 72 aa1.47□□□□□ -2.17
RRP42YDL111C ECM29P38737 1868 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms