RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C ABF2Q02486 183 aa1.57□□□□□ -2.16
BRE1YDL074C RPL26AP05743 127 aaKnown RBP1.56□□□□□ -2.16
BRE1YDL074C CDC43P18898 376 aa1.56□□□□□ -2.16
BRE1YDL074C YFR057WP43625 151 aa1.56□□□□□ -2.16
BRE1YDL074C YGL088WP53151 121 aa1.56□□□□□ -2.16
BRE1YDL074C RPL26BP53221 127 aaKnown RBP1.56□□□□□ -2.16
BRE1YDL074C MRPS12P53732 153 aa1.56□□□□□ -2.16
BRE1YDL074C RGM1Q00453 211 aa1.56□□□□□ -2.16
BRE1YDL074C VTS1Q08831 523 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
BRE1YDL074C YIL002W-AQ3E7Z5 69 aa1.56□□□□□ -2.16
BRE1YDL074C CPR1P14832 162 aaKnown RBP1.55□□□□□ -2.16
BRE1YDL074C YCR001WP25347 104 aa1.55□□□□□ -2.16
BRE1YDL074C MRPL24P36525 258 aaPredicted RBP1.55□□□□□ -2.16
BRE1YDL074C RPC10P40422 70 aa1.55□□□□□ -2.16
BRE1YDL074C YFR035CP43608 114 aa1.55□□□□□ -2.16
BRE1YDL074C HUR1P45820 110 aa1.55□□□□□ -2.16
BRE1YDL074C YMR295CQ03559 197 aa1.55□□□□□ -2.16
BRE1YDL074C RDS3Q06835 107 aaPredicted RBP1.55□□□□□ -2.16
BRE1YDL074C RPL29P05747 59 aaPredicted RBP1.55□□□□□ -2.16
BRE1YDL074C YDL022C-AP0C5L6 82 aa1.55□□□□□ -2.16
BRE1YDL074C SOH1P38633 127 aa1.55□□□□□ -2.16
BRE1YDL074C YEL067CP39978 195 aa1.55□□□□□ -2.16
BRE1YDL074C VTC1P40046 129 aaRIP-Chip data1.55□□□□□ -2.16not detected
BRE1YDL074C OST2P46964 130 aa1.55□□□□□ -2.16
BRE1YDL074C UBC11P52492 156 aa1.55□□□□□ -2.16
BRE1YDL074C HAL1Q01766 294 aa1.55□□□□□ -2.16
BRE1YDL074C RTC6O14464 93 aa1.54□□□□□ -2.16
BRE1YDL074C YBL039W-BP0C268 59 aa1.54□□□□□ -2.16
BRE1YDL074C SFT1P43682 97 aa1.54□□□□□ -2.16
BRE1YDL074C TSC3Q3E790 80 aa1.54□□□□□ -2.16
BRE1YDL074C YLL006W-AQ3E814 58 aa1.54□□□□□ -2.16
BRE1YDL074C RPL33AP05744 107 aaKnown RBP1.54□□□□□ -2.16
BRE1YDL074C AQY2P0CD90 149 aa1.54□□□□□ -2.16
BRE1YDL074C SVP26P38869 228 aa1.54□□□□□ -2.16
BRE1YDL074C AIM19P40502 157 aa1.54□□□□□ -2.16
BRE1YDL074C RPL33BP41056 107 aaKnown RBP1.54□□□□□ -2.16
BRE1YDL074C YFL019CP43576 117 aa1.54□□□□□ -2.16
BRE1YDL074C SMD1Q02260 146 aaPredicted RBP1.54□□□□□ -2.16
BRE1YDL074C ICY1Q04329 127 aa1.54□□□□□ -2.16
BRE1YDL074C YMR320WQ04897 101 aa1.54□□□□□ -2.16
BRE1YDL074C YGL041C-BQ3E750 60 aa1.54□□□□□ -2.16
BRE1YDL074C YAL065CO13511 128 aa1.53□□□□□ -2.16
BRE1YDL074C RPL11AP0C0W9 174 aaKnown RBP1.53□□□□□ -2.16
BRE1YDL074C INO4P13902 151 aa1.53□□□□□ -2.16
BRE1YDL074C RPA12P32529 125 aaKnown RBP1.53□□□□□ -2.16
BRE1YDL074C MID2P36027 376 aa1.53□□□□□ -2.16
BRE1YDL074C MVB12P42939 101 aa1.53□□□□□ -2.16
BRE1YDL074C KNH1P50112 268 aa1.53□□□□□ -2.16
BRE1YDL074C YNL190WP53872 204 aa1.53□□□□□ -2.16
BRE1YDL074C RPL11BQ3E757 174 aaPredicted RBP1.53□□□□□ -2.16
BRE1YDL074C RPP2AP05319 106 aaKnown RBP1.52□□□□□ -2.17
BRE1YDL074C YBR219CP38317 127 aa1.52□□□□□ -2.17
BRE1YDL074C DSE2P38844 325 aa1.52□□□□□ -2.17
BRE1YDL074C YAR1P46683 200 aa1.52□□□□□ -2.17
BRE1YDL074C SKI6P46948 246 aaPredicted RBP1.52□□□□□ -2.17
BRE1YDL074C TRA1P38811 3744 aa1.52□□□□□ -2.17
BRE1YDL074C YLR236CA0A023PZG4 107 aa1.52□□□□□ -2.17
BRE1YDL074C YJR107C-AP0CT86 78 aa1.52□□□□□ -2.17
BRE1YDL074C MSA2P36157 363 aa1.52□□□□□ -2.17
BRE1YDL074C IRC21Q04772 201 aa1.52□□□□□ -2.17
BRE1YDL074C PBA1Q05778 276 aa1.52□□□□□ -2.17
BRE1YDL074C EMC6Q12431 108 aa1.52□□□□□ -2.17
BRE1YDL074C YAR023CD6VPM8 179 aa1.51□□□□□ -2.17
BRE1YDL074C STF1P01098 86 aa1.51□□□□□ -2.17
BRE1YDL074C RAD6P06104 172 aa1.51□□□□□ -2.17
BRE1YDL074C YER039C-AP0CD97 72 aa1.51□□□□□ -2.17
BRE1YDL074C PBI2P0CT04 75 aaKnown RBP1.51□□□□□ -2.17
BRE1YDL074C UBC4P15731 148 aa1.51□□□□□ -2.17
BRE1YDL074C YFL041W-AQ3E817 63 aa1.51□□□□□ -2.17
BRE1YDL074C ISD11Q6Q560 94 aa1.51□□□□□ -2.17
BRE1YDL074C YPL229WQ99395 206 aa1.51□□□□□ -2.17
BRE1YDL074C Q0032Q9ZZX7 96 aa1.51□□□□□ -2.17
BRE1YDL074C KRE1P17260 313 aa1.51□□□□□ -2.17
BRE1YDL074C YHL042WP38729 150 aa1.51□□□□□ -2.17
BRE1YDL074C YAL064WP39711 94 aa1.51□□□□□ -2.17
BRE1YDL074C YFL065CP43539 102 aa1.51□□□□□ -2.17
BRE1YDL074C RSM19P53733 91 aaPredicted RBP1.51□□□□□ -2.17
BRE1YDL074C YPR203WQ08994 102 aa1.51□□□□□ -2.17
BRE1YDL074C FYV5P25585 152 aa1.5□□□□□ -2.17
BRE1YDL074C SNA2P56508 79 aa1.5□□□□□ -2.17
BRE1YDL074C SHH4Q06236 168 aa1.5□□□□□ -2.17
BRE1YDL074C NUM1Q00402 2748 aa1.5□□□□□ -2.17
BRE1YDL074C ECM12O13529 151 aa1.49□□□□□ -2.17
BRE1YDL074C DIF1O13577 133 aa1.49□□□□□ -2.17
BRE1YDL074C MRP10O75012 95 aa1.49□□□□□ -2.17
BRE1YDL074C ATP18P81450 59 aa1.49□□□□□ -2.17
BRE1YDL074C YDR115WQ04598 105 aa1.49□□□□□ -2.17
BRE1YDL074C YDR029WQ12111 104 aa1.49□□□□□ -2.17
BRE1YDL074C YDR381C-AQ3E6R5 114 aa1.49□□□□□ -2.17
BRE1YDL074C YAL063C-AQ3E791 96 aa1.49□□□□□ -2.17
BRE1YDL074C YNL042W-BQ3E7Z2 85 aa1.49□□□□□ -2.17
BRE1YDL074C SPT4P32914 102 aaPredicted RBP1.49□□□□□ -2.17
BRE1YDL074C YSY6P38374 65 aa1.49□□□□□ -2.17
BRE1YDL074C TDA2P40045 126 aa1.49□□□□□ -2.17
BRE1YDL074C COF1Q03048 143 aaKnown RBP1.49□□□□□ -2.17
BRE1YDL074C YJL127C-BQ3E828 52 aa1.49□□□□□ -2.17
BRE1YDL074C YLL066W-BQ8TGJ7 56 aa1.49□□□□□ -2.17
BRE1YDL074C YHR139C-AO13536 103 aa1.48□□□□□ -2.17
BRE1YDL074C YOR304C-AO14468 76 aa1.48□□□□□ -2.17
BRE1YDL074C BET1P22804 142 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 129.1 ms