RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W YFL019CP43576 117 aa2.71□□□□□ -1.98
TSR1YDL060W SBH1P52870 82 aa2.71□□□□□ -1.98
TSR1YDL060W LSM6Q06406 86 aaKnown RBP2.71□□□□□ -1.98
TSR1YDL060W YDR246W-AQ3E763 66 aa2.71□□□□□ -1.98
TSR1YDL060W HMRA2P0CY13 119 aa2.71□□□□□ -1.98
TSR1YDL060W YHR125WP38831 101 aa2.71□□□□□ -1.98
TSR1YDL060W YHR173CP38864 112 aa2.71□□□□□ -1.98
TSR1YDL060W EDC1P53080 175 aaPredicted RBP2.71□□□□□ -1.98
TSR1YDL060W BOL1Q3E793 110 aa2.71□□□□□ -1.98
TSR1YDL060W SFT1P43682 97 aa2.7□□□□□ -1.98
TSR1YDL060W YGR025WP53216 100 aa2.7□□□□□ -1.98
TSR1YDL060W YDR381C-AQ3E6R5 114 aa2.7□□□□□ -1.98
TSR1YDL060W GCN1P33892 2672 aaKnown RBP2.7□□□□□ -1.98
TSR1YDL060W YSF3P0C074 85 aaPredicted RBP2.69□□□□□ -1.98
TSR1YDL060W COA3Q3E7B2 85 aa2.69□□□□□ -1.98
TSR1YDL060W YPL038W-AQ3E7B4 63 aa2.69□□□□□ -1.98
TSR1YDL060W YAR029WP39549 74 aa2.69□□□□□ -1.98
TSR1YDL060W ARC15P40518 154 aaRIP-Chip data2.69□□□□□ -1.98not detected
TSR1YDL060W YOR034C-AQ3E735 80 aa2.69□□□□□ -1.98
TSR1YDL060W CTR2P38865 189 aa2.68□□□□□ -1.98
TSR1YDL060W DAD4P69851 72 aa2.68□□□□□ -1.98
TSR1YDL060W YDR274CP87283 123 aa2.68□□□□□ -1.98
TSR1YDL060W YLR412C-AQ3E742 68 aa2.68□□□□□ -1.98
TSR1YDL060W YHL042WP38729 150 aa2.68□□□□□ -1.98
TSR1YDL060W GON7P46984 123 aa2.68□□□□□ -1.98
TSR1YDL060W COX12Q01519 83 aa2.68□□□□□ -1.98
TSR1YDL060W YHR032W-AP0C5N6 59 aa2.67□□□□□ -1.98
TSR1YDL060W SVP26P38869 228 aa2.67□□□□□ -1.98
TSR1YDL060W IRC19Q07843 230 aa2.67□□□□□ -1.98
TSR1YDL060W FYV12Q08559 129 aa2.67□□□□□ -1.98
TSR1YDL060W AIM11P87275 137 aa2.67□□□□□ -1.98
TSR1YDL060W YOR376W-AQ3E805 51 aa2.67□□□□□ -1.98
TSR1YDL060W YPR117WQ06116 2489 aa2.66□□□□□ -1.98
TSR1YDL060W YAR023CD6VPM8 179 aa2.66□□□□□ -1.98
TSR1YDL060W YEL045CP32616 141 aa2.66□□□□□ -1.98
TSR1YDL060W PAU7P39545 55 aa2.66□□□□□ -1.98
TSR1YDL060W YER187WP40102 141 aa2.66□□□□□ -1.98
TSR1YDL060W TOM6P33448 61 aa2.66□□□□□ -1.98
TSR1YDL060W YGL193CP53097 103 aa2.66□□□□□ -1.98
TSR1YDL060W MRPS12P53732 153 aa2.66□□□□□ -1.98
TSR1YDL060W MGR2Q02889 113 aa2.66□□□□□ -1.98
TSR1YDL060W RAD6P06104 172 aa2.65□□□□□ -1.98
TSR1YDL060W PFY1P07274 126 aa2.65□□□□□ -1.98
TSR1YDL060W HSP12P22943 109 aaKnown RBP2.65□□□□□ -1.98
TSR1YDL060W AIM19P40502 157 aa2.65□□□□□ -1.98
TSR1YDL060W YKR045CP36138 183 aa2.65□□□□□ -1.99
TSR1YDL060W SPI1P40092 148 aa2.65□□□□□ -1.99
TSR1YDL060W ERI1P62651 68 aaKnown RBP2.65□□□□□ -1.99
TSR1YDL060W YHR213WP0CI67 198 aa2.63□□□□□ -1.99
TSR1YDL060W FPR1P20081 114 aaKnown RBP2.63□□□□□ -1.99
TSR1YDL060W TMC1Q08422 150 aaPredicted RBP2.63□□□□□ -1.99
TSR1YDL060W YGL258W-AQ3E740 77 aa2.63□□□□□ -1.99
TSR1YDL060W YIL046W-AQ3E7Z4 54 aa2.63□□□□□ -1.99
TSR1YDL060W HAL1Q01766 294 aa2.63□□□□□ -1.99
TSR1YDL060W MIC10Q96VH5 97 aa2.63□□□□□ -1.99
TSR1YDL060W PIR5P46999 287 aa2.62□□□□□ -1.99
TSR1YDL060W YLR194CQ05777 254 aa2.62□□□□□ -1.99
TSR1YDL060W YNL277W-AQ3E7Z0 62 aa2.62□□□□□ -1.99
TSR1YDL060W UBC4P15731 148 aa2.61□□□□□ -1.99
TSR1YDL060W IMP2P46972 177 aa2.61□□□□□ -1.99
TSR1YDL060W MPC3P53311 146 aa2.61□□□□□ -1.99
TSR1YDL060W UTH1P36135 365 aa2.61□□□□□ -1.99
TSR1YDL060W YSY6P38374 65 aa2.61□□□□□ -1.99
TSR1YDL060W YNL217WP40152 326 aa2.61□□□□□ -1.99
TSR1YDL060W GAT4P40569 121 aa2.61□□□□□ -1.99
TSR1YDL060W ATP20Q12233 115 aa2.61□□□□□ -1.99
TSR1YDL060W YLR285C-AQ3E771 56 aa2.61□□□□□ -1.99
TSR1YDL060W RSM19P53733 91 aaPredicted RBP2.6□□□□□ -1.99
TSR1YDL060W MRPS8Q03799 155 aa2.6□□□□□ -1.99
TSR1YDL060W ICY1Q04329 127 aa2.6□□□□□ -1.99
TSR1YDL060W TEL1P38110 2787 aa2.6□□□□□ -1.99
TSR1YDL060W YIL086CP40503 102 aa2.6□□□□□ -1.99
TSR1YDL060W YJL027CP47063 138 aaPredicted RBP2.6□□□□□ -1.99
TSR1YDL060W MDM35O60200 86 aa2.59□□□□□ -1.99
TSR1YDL060W YHR214C-DP0CX93 97 aa2.59□□□□□ -1.99
TSR1YDL060W TOR2P32600 2474 aaKnown RBP2.59□□□□□ -1.99
TSR1YDL060W PRP8P33334 2413 aaKnown RBP2.59□□□□□ -1.99
TSR1YDL060W ICS3P47034 131 aa2.59□□□□□ -2
TSR1YDL060W YJR146WP47174 117 aa2.59□□□□□ -2
TSR1YDL060W TOS6P48560 102 aa2.59□□□□□ -2
TSR1YDL060W YHL037CP38733 133 aa2.58□□□□□ -2
TSR1YDL060W YMR295CQ03559 197 aa2.58□□□□□ -2
TSR1YDL060W EMC6Q12431 108 aa2.58□□□□□ -2
TSR1YDL060W SHU1P38751 150 aa2.58□□□□□ -2
TSR1YDL060W MPC2P38857 129 aa2.58□□□□□ -2
TSR1YDL060W YGR121W-AQ3E816 71 aa2.58□□□□□ -2
TSR1YDL060W KTI11Q3E840 82 aa2.58□□□□□ -2
TSR1YDL060W CCW14O13547 238 aa2.57□□□□□ -2
TSR1YDL060W YBL071CP38185 102 aa2.57□□□□□ -2
TSR1YDL060W RRT1P38192 103 aa2.57□□□□□ -2
TSR1YDL060W YER084WP40057 128 aa2.57□□□□□ -2
TSR1YDL060W NOP10Q6Q547 58 aaPredicted RBP2.57□□□□□ -2
TSR1YDL060W YGR164WP53291 111 aa2.57□□□□□ -2
TSR1YDL060W YLR162WQ06235 118 aa2.57□□□□□ -2
TSR1YDL060W YER135CP40082 130 aa2.56□□□□□ -2
TSR1YDL060W HUR1P45820 110 aa2.56□□□□□ -2
TSR1YDL060W RPL39P04650 51 aa2.56□□□□□ -2
TSR1YDL060W AIM4P38305 123 aaPredicted RBP2.56□□□□□ -2
TSR1YDL060W RPS23AP0CX29 145 aaKnown RBP2.55□□□□□ -2
TSR1YDL060W RPS23BP0CX30 145 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms