RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH3	YCR092C	POP7	P38291	140 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	RPB11	P38902	120 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	HIT1	P46973	164 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	YOR268C	Q08734	132 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	YGL194C-A	Q2V2P6	80 aa		0.81	□□□□□ -2.28
MSH3	YCR092C	ADH1	P00330	348 aa	Known RBP	0.8	□□□□□ -2.28
MSH3	YCR092C	YBL081W	P38180	368 aa	Known RBP	0.8	□□□□□ -2.28
MSH3	YCR092C	CWP2	P43497	92 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	ERV14	P53173	138 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	RGM1	Q00453	211 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	VMA9	Q3E7B6	73 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	YCR024C-B	Q3E7Z8	88 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	POR1	P04840	283 aa	Known RBP	0.8	□□□□□ -2.28
MSH3	YCR092C	YDR210W	Q03482	75 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	CNL1	Q06333	122 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	CSM4	Q08955	156 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	COA6	Q3E846	104 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	SMP1	P38128	452 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	YBR219C	P38317	127 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	SNA2	P56508	79 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	ABF2	Q02486	183 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	YMR181C	Q03231	154 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	YML108W	Q03759	105 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	CUE4	Q04201	117 aa	Predicted RBP	0.8	□□□□□ -2.28
MSH3	YCR092C	ISD11	Q6Q560	94 aa		0.8	□□□□□ -2.28
MSH3	YCR092C	KRE1	P17260	313 aa		0.79	□□□□□ -2.28
MSH3	YCR092C	YEL067C	P39978	195 aa		0.79	□□□□□ -2.28
MSH3	YCR092C	SNU13	P39990	126 aa	Known RBP	0.79	□□□□□ -2.28
MSH3	YCR092C	THG1	P53215	237 aa	Known RBP	0.79	□□□□□ -2.28
MSH3	YCR092C	YMR295C	Q03559	197 aa		0.79	□□□□□ -2.28
MSH3	YCR092C	RRT7	Q07829	113 aa		0.79	□□□□□ -2.28
MSH3	YCR092C	HHF1	P02309	103 aa	Known RBP	0.79	□□□□□ -2.28
MSH3	YCR092C	GSP2	P32836	220 aa	Known RBP	0.79	□□□□□ -2.28
MSH3	YCR092C	YPL073C	P40323	161 aa		0.79	□□□□□ -2.28
MSH3	YCR092C	PGD1	P40356	397 aa		0.79	□□□□□ -2.28
MSH3	YCR092C	ADD37	Q03233	198 aa		0.79	□□□□□ -2.28
MSH3	YCR092C	SME1	Q12330	94 aa	Predicted RBP	0.79	□□□□□ -2.28
MSH3	YCR092C	IGO2	Q9P305	131 aa		0.79	□□□□□ -2.28
MSH3	YCR092C	FYV5	P25585	152 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	OST2	P46964	130 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	EOS1	P53938	366 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	PAU17	Q12370	124 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	YCL001W-B	Q96VH2	84 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	YDL022C-A	P0C5L6	82 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	SRB6	P32570	121 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	AIM4	P38305	123 aa	Predicted RBP	0.78	□□□□□ -2.28
MSH3	YCR092C	YAL064W	P39711	94 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	NSE4	P43124	402 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	MRPS12	P53732	153 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	FYV7	Q12247	151 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	YBR230W-A	Q3E762	66 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	YML054C-A	Q3E809	52 aa		0.78	□□□□□ -2.28
MSH3	YCR092C	BNS1	P50084	137 aa		0.78	□□□□□ -2.29
MSH3	YCR092C	ZEO1	Q08245	113 aa		0.78	□□□□□ -2.29
MSH3	YCR092C	ATP14	Q12349	124 aa		0.78	□□□□□ -2.29
MSH3	YCR092C	YNR034W-A	Q3E841	98 aa		0.78	□□□□□ -2.29
MSH3	YCR092C	YCL021W-A	Q96VH3	125 aa		0.78	□□□□□ -2.29
MSH3	YCR092C	YLR157W-D	P0CE99	70 aa		0.77	□□□□□ -2.29
MSH3	YCR092C	RNP1	P32385	249 aa		0.77	□□□□□ -2.29
MSH3	YCR092C	YPL257W	Q08974	193 aa		0.77	□□□□□ -2.29
MSH3	YCR092C	YOR015W	Q12169	119 aa		0.77	□□□□□ -2.29
MSH3	YCR092C	MSA2	P36157	363 aa		0.77	□□□□□ -2.29
MSH3	YCR092C	YGR025W	P53216	100 aa		0.77	□□□□□ -2.29
MSH3	YCR092C	DAD3	P69850	94 aa		0.77	□□□□□ -2.29
MSH3	YCR092C	YBR298C-A	Q8TGK4	73 aa		0.77	□□□□□ -2.29
MSH3	YCR092C	DDR2	P89113	61 aa		0.76	□□□□□ -2.29
MSH3	YCR092C	LIP1	Q03579	150 aa		0.76	□□□□□ -2.29
MSH3	YCR092C	YOR072W	Q08486	104 aa		0.76	□□□□□ -2.29
MSH3	YCR092C	YLL006W-A	Q3E814	58 aa		0.76	□□□□□ -2.29
MSH3	YCR092C	ATP5	P09457	212 aa		0.76	□□□□□ -2.29
MSH3	YCR092C	YAR1	P46683	200 aa		0.76	□□□□□ -2.29
MSH3	YCR092C	YGL230C	P53074	147 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	RSM19	P53733	91 aa	Predicted RBP	0.75	□□□□□ -2.29
MSH3	YCR092C	YNR077C	P53758	84 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	PAU23	Q07987	124 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	PRE1	P22141	198 aa	Known RBP	0.75	□□□□□ -2.29
MSH3	YCR092C	GSP1	P32835	219 aa	Known RBP	0.75	□□□□□ -2.29
MSH3	YCR092C	GTT1	P40582	234 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	YJR128W	P47162	119 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	BSC4	P53841	131 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	YLR296W	Q05898	108 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	YHR130C	P38834	111 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	YGL149W	P53116	101 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	AIM11	P87275	137 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	YIL014C-A	Q02598	104 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	IRC21	Q04772	201 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	RRT15	Q3E811	62 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	YJL127C-B	Q3E828	52 aa		0.75	□□□□□ -2.29
MSH3	YCR092C	RPL23A	P0CX41	137 aa	Known RBP	0.74	□□□□□ -2.29
MSH3	YCR092C	RPL23B	P0CX42	137 aa	Known RBP	0.74	□□□□□ -2.29
MSH3	YCR092C	YBR016W	P38216	128 aa		0.74	□□□□□ -2.29
MSH3	YCR092C	YML079W	Q03629	201 aa		0.74	□□□□□ -2.29
MSH3	YCR092C	YDL157C	Q12082	118 aa		0.74	□□□□□ -2.29
MSH3	YCR092C	KTI11	Q3E840	82 aa		0.74	□□□□□ -2.29
MSH3	YCR092C	UGX2	P32772	223 aa		0.74	□□□□□ -2.29
MSH3	YCR092C	YER134C	P40081	178 aa		0.74	□□□□□ -2.29
MSH3	YCR092C	DAD2	P36162	133 aa		0.73	□□□□□ -2.29
MSH3	YCR092C	YIA6	P40556	373 aa		0.73	□□□□□ -2.29
MSH3	YCR092C	CWC27	Q02770	301 aa		0.73	□□□□□ -2.29
MSH3	YCR092C	YDL012C	Q12489	107 aa		0.73	□□□□□ -2.29

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