RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAT1	YCR077C	MRP10	O75012	95 aa		4.65	□□□□□ -1.67
PAT1	YCR077C	ICS3	P47034	131 aa		4.65	□□□□□ -1.67
PAT1	YCR077C	PBA1	Q05778	276 aa		4.64	□□□□□ -1.67
PAT1	YCR077C	PBP4	Q07362	185 aa	Known RBP	4.64	□□□□□ -1.67
PAT1	YCR077C	YPR053C	Q6Q5F3	151 aa		4.64	□□□□□ -1.67
PAT1	YCR077C	SPS100	P13130	326 aa		4.64	□□□□□ -1.67
PAT1	YCR077C	RPS8A	P0CX39	200 aa	Known RBP	4.63	□□□□□ -1.67
PAT1	YCR077C	RPS8B	P0CX40	200 aa	Known RBP	4.63	□□□□□ -1.67
PAT1	YCR077C	YMR295C	Q03559	197 aa		4.63	□□□□□ -1.67
PAT1	YCR077C	YFR035C	P43608	114 aa		4.63	□□□□□ -1.67
PAT1	YCR077C	YGR045C	P53229	120 aa		4.63	□□□□□ -1.67
PAT1	YCR077C	RPS23A	P0CX29	145 aa	Known RBP	4.62	□□□□□ -1.67
PAT1	YCR077C	RPS23B	P0CX30	145 aa		4.62	□□□□□ -1.67
PAT1	YCR077C	YLR194C	Q05777	254 aa		4.62	□□□□□ -1.67
PAT1	YCR077C	YOL160W	Q08321	113 aa		4.62	□□□□□ -1.67
PAT1	YCR077C	YDR246W-A	Q3E763	66 aa		4.62	□□□□□ -1.67
PAT1	YCR077C	AIM19	P40502	157 aa		4.62	□□□□□ -1.67
PAT1	YCR077C	YMR181C	Q03231	154 aa		4.62	□□□□□ -1.67
PAT1	YCR077C	GCN1	P33892	2672 aa	Known RBP	4.61	□□□□□ -1.67
PAT1	YCR077C	RPB9	P27999	122 aa		4.61	□□□□□ -1.67
PAT1	YCR077C	YDR274C	P87283	123 aa		4.61	□□□□□ -1.67
PAT1	YCR077C	YML122C	Q03207	126 aa		4.61	□□□□□ -1.67
PAT1	YCR077C	PPT2	Q12036	173 aa		4.61	□□□□□ -1.67
PAT1	YCR077C	RPL15A	P05748	204 aa	Known RBP	4.6	□□□□□ -1.67
PAT1	YCR077C	ERI1	P62651	68 aa	Known RBP	4.6	□□□□□ -1.67
PAT1	YCR077C	YDL009C	Q12210	107 aa		4.6	□□□□□ -1.67
PAT1	YCR077C	TSC3	Q3E790	80 aa		4.6	□□□□□ -1.67
PAT1	YCR077C	YOR008C-A	Q3E7B9	74 aa		4.6	□□□□□ -1.67
PAT1	YCR077C	MRPS12	P53732	153 aa		4.6	□□□□□ -1.67
PAT1	YCR077C	CTR2	P38865	189 aa		4.59	□□□□□ -1.67
PAT1	YCR077C	RSM18	P40033	138 aa		4.59	□□□□□ -1.67
PAT1	YCR077C	PRM7	Q12459	698 aa		4.59	□□□□□ -1.67
PAT1	YCR077C	CCW14	O13547	238 aa		4.58	□□□□□ -1.68
PAT1	YCR077C	MRPL38	P35996	138 aa	Predicted RBP	4.58	□□□□□ -1.68
PAT1	YCR077C	TDA2	P40045	126 aa		4.58	□□□□□ -1.68
PAT1	YCR077C	URM1	P40554	99 aa	Predicted RBP	4.58	□□□□□ -1.68
PAT1	YCR077C	YOR381W-A	Q3E804	55 aa		4.58	□□□□□ -1.68
PAT1	YCR077C	RPL26A	P05743	127 aa	Known RBP	4.58	□□□□□ -1.68
PAT1	YCR077C	YEL045C	P32616	141 aa		4.58	□□□□□ -1.68
PAT1	YCR077C	YAL064W	P39711	94 aa		4.58	□□□□□ -1.68
PAT1	YCR077C	AIM4	P38305	123 aa	Predicted RBP	4.57	□□□□□ -1.68
PAT1	YCR077C	SAP30	P38429	201 aa		4.57	□□□□□ -1.68
PAT1	YCR077C	YLR285C-A	Q3E771	56 aa		4.57	□□□□□ -1.68
PAT1	YCR077C	YML100W-A	Q8TGT0	57 aa		4.57	□□□□□ -1.68
PAT1	YCR077C	ATP15	P21306	62 aa		4.57	□□□□□ -1.68
PAT1	YCR077C	SED1	Q01589	338 aa		4.57	□□□□□ -1.68
PAT1	YCR077C	YBR144C	P34215	104 aa		4.56	□□□□□ -1.68
PAT1	YCR077C	YHL037C	P38733	133 aa		4.56	□□□□□ -1.68
PAT1	YCR077C	YGL088W	P53151	121 aa		4.56	□□□□□ -1.68
PAT1	YCR077C	YBR056W-A	I2HB52	66 aa		4.56	□□□□□ -1.68
PAT1	YCR077C	YJR146W	P47174	117 aa		4.56	□□□□□ -1.68
PAT1	YCR077C	EDC1	P53080	175 aa	Predicted RBP	4.56	□□□□□ -1.68
PAT1	YCR077C	AIR2	Q12476	344 aa	Known RBP	4.56	□□□□□ -1.68
PAT1	YCR077C	LDB16	P25587	256 aa		4.55	□□□□□ -1.68
PAT1	YCR077C	YGR025W	P53216	100 aa		4.55	□□□□□ -1.68
PAT1	YCR077C	POR2	P40478	281 aa		4.55	□□□□□ -1.68
PAT1	YCR077C	DCV1	P43595	202 aa		4.55	□□□□□ -1.68
PAT1	YCR077C	YNL190W	P53872	204 aa		4.55	□□□□□ -1.68
PAT1	YCR077C	WWM1	P43582	211 aa	Known RBP	4.54	□□□□□ -1.68
PAT1	YCR077C	YGL193C	P53097	103 aa		4.54	□□□□□ -1.68
PAT1	YCR077C	DDR48	P18899	430 aa	Known RBP	4.54	□□□□□ -1.68
PAT1	YCR077C	MPC2	P38857	129 aa		4.54	□□□□□ -1.68
PAT1	YCR077C	CRC1	Q12289	327 aa		4.54	□□□□□ -1.68
PAT1	YCR077C	YBR200W-A	Q3E755	54 aa		4.54	□□□□□ -1.68
PAT1	YCR077C	HHF1	P02309	103 aa	Known RBP	4.53	□□□□□ -1.68
PAT1	YCR077C	YLR156W	P0CE96	114 aa		4.53	□□□□□ -1.68
PAT1	YCR077C	YLR159W	P0CE97	114 aa		4.53	□□□□□ -1.68
PAT1	YCR077C	YLR161W	P0CE98	114 aa		4.53	□□□□□ -1.68
PAT1	YCR077C	HUR1	P45820	110 aa		4.53	□□□□□ -1.68
PAT1	YCR077C	YGL260W	P53056	76 aa		4.53	□□□□□ -1.68
PAT1	YCR077C	ATP20	Q12233	115 aa		4.53	□□□□□ -1.68
PAT1	YCR077C	YGR121W-A	Q3E816	71 aa		4.53	□□□□□ -1.68
PAT1	YCR077C	YHR022C	P38763	256 aa		4.52	□□□□□ -1.69
PAT1	YCR077C	YAL065C	O13511	128 aa		4.51	□□□□□ -1.69
PAT1	YCR077C	YOL085C	Q99345	113 aa		4.51	□□□□□ -1.69
PAT1	YCR077C	BPH1	P25356	2167 aa		4.51	□□□□□ -1.69
PAT1	YCR077C	MIG3	P39943	394 aa		4.51	□□□□□ -1.69
PAT1	YCR077C	CCW12	Q12127	133 aa		4.51	□□□□□ -1.69
PAT1	YCR077C	YCL048W-A	Q2V2Q2	79 aa		4.51	□□□□□ -1.69
PAT1	YCR077C	RPL26B	P53221	127 aa	Known RBP	4.5	□□□□□ -1.69
PAT1	YCR077C	YLR162W	Q06235	118 aa		4.5	□□□□□ -1.69
PAT1	YCR077C	YOR314W	Q12506	109 aa		4.5	□□□□□ -1.69
PAT1	YCR077C	MSA2	P36157	363 aa		4.49	□□□□□ -1.69
PAT1	YCR077C	SHU1	P38751	150 aa		4.49	□□□□□ -1.69
PAT1	YCR077C	YPL278C	Q08990	100 aa		4.49	□□□□□ -1.69
PAT1	YCR077C	YPS5	P53057	165 aa		4.49	□□□□□ -1.69
PAT1	YCR077C	SPG4	Q04438	115 aa		4.49	□□□□□ -1.69
PAT1	YCR077C	PRP8	P33334	2413 aa	Known RBP	4.49	□□□□□ -1.69
PAT1	YCR077C	YER135C	P40082	130 aa		4.48	□□□□□ -1.69
PAT1	YCR077C	QCR8	P08525	94 aa		4.47	□□□□□ -1.69
PAT1	YCR077C	YMR122C	Q03879	124 aa		4.47	□□□□□ -1.69
PAT1	YCR077C	CUP1-1	P0CX80	61 aa		4.47	□□□□□ -1.69
PAT1	YCR077C	CUP1-2	P0CX81	61 aa		4.47	□□□□□ -1.69
PAT1	YCR077C	YPR013C	Q12145	317 aa		4.47	□□□□□ -1.69
PAT1	YCR077C	URA2	P07259	2214 aa	Known RBP	4.46	□□□□□ -1.7
PAT1	YCR077C	YER188C-A	P0C0V2	99 aa		4.46	□□□□□ -1.7
PAT1	YCR077C	YNL146C-A	Q3E7Z1	64 aa		4.46	□□□□□ -1.7
PAT1	YCR077C	NOP10	Q6Q547	58 aa	Predicted RBP	4.46	□□□□□ -1.7
PAT1	YCR077C	OST5	Q92316	86 aa		4.46	□□□□□ -1.7
PAT1	YCR077C	NUM1	Q00402	2748 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms