RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A YER135CP40082 130 aa2.14□□□□□ -2.07
RIM1YCR028C-A VPS55P47111 140 aa2.14□□□□□ -2.07
RIM1YCR028C-A YGL088WP53151 121 aa2.14□□□□□ -2.07
RIM1YCR028C-A YGR025WP53216 100 aa2.14□□□□□ -2.07
RIM1YCR028C-A YGR039WP53225 103 aa2.14□□□□□ -2.07
RIM1YCR028C-A MRPS12P53732 153 aa2.14□□□□□ -2.07
RIM1YCR028C-A YNL190WP53872 204 aa2.14□□□□□ -2.07
RIM1YCR028C-A COF1Q03048 143 aaKnown RBP2.14□□□□□ -2.07
RIM1YCR028C-A SPG4Q04438 115 aa2.14□□□□□ -2.07
RIM1YCR028C-A YIR021W-AQ3E739 70 aa2.14□□□□□ -2.07
RIM1YCR028C-A ENV10Q99382 181 aa2.14□□□□□ -2.07
RIM1YCR028C-A FAS1P07149 2051 aaKnown RBP2.13□□□□□ -2.07
RIM1YCR028C-A TAO3P40468 2376 aa2.13□□□□□ -2.07
RIM1YCR028C-A YHR139C-AO13536 103 aa2.13□□□□□ -2.07
RIM1YCR028C-A VMA11P32842 164 aa2.13□□□□□ -2.07
RIM1YCR028C-A YHL042WP38729 150 aa2.13□□□□□ -2.07
RIM1YCR028C-A YEL008WP40001 126 aa2.13□□□□□ -2.07
RIM1YCR028C-A RGM1Q00453 211 aa2.13□□□□□ -2.07
RIM1YCR028C-A MRPS8Q03799 155 aa2.13□□□□□ -2.07
RIM1YCR028C-A EMC6Q12431 108 aa2.13□□□□□ -2.07
RIM1YCR028C-A YOR020W-AQ3E824 90 aa2.13□□□□□ -2.07
RIM1YCR028C-A VPS13Q07878 3144 aa2.12□□□□□ -2.07
RIM1YCR028C-A RPL2AP0CX45 254 aaKnown RBP2.12□□□□□ -2.07
RIM1YCR028C-A RPL2BP0CX46 254 aaKnown RBP2.12□□□□□ -2.07
RIM1YCR028C-A MPC2P38857 129 aa2.12□□□□□ -2.07
RIM1YCR028C-A SVP26P38869 228 aa2.12□□□□□ -2.07
RIM1YCR028C-A ALG13P53178 202 aa2.12□□□□□ -2.07
RIM1YCR028C-A YPR013CQ12145 317 aa2.12□□□□□ -2.07
RIM1YCR028C-A YDR381C-AQ3E6R5 114 aa2.12□□□□□ -2.07
RIM1YCR028C-A RPS11AP0CX47 156 aaKnown RBP2.11□□□□□ -2.07
RIM1YCR028C-A RPS11BP0CX48 156 aaKnown RBP2.11□□□□□ -2.07
RIM1YCR028C-A UBC5P15732 148 aa2.11□□□□□ -2.07
RIM1YCR028C-A MSA2P36157 363 aa2.11□□□□□ -2.07
RIM1YCR028C-A ARC15P40518 154 aaRIP-Chip data2.11□□□□□ -2.07not detected
RIM1YCR028C-A CWP2P43497 92 aa2.11□□□□□ -2.07
RIM1YCR028C-A SHH4Q06236 168 aa2.11□□□□□ -2.07
RIM1YCR028C-A POL2P21951 2222 aaKnown RBP2.11□□□□□ -2.07
RIM1YCR028C-A TOM6P33448 61 aa2.1□□□□□ -2.07
RIM1YCR028C-A BLM10P43583 2143 aa2.1□□□□□ -2.07
RIM1YCR028C-A KNH1P50112 268 aa2.1□□□□□ -2.07
RIM1YCR028C-A ERI1P62651 68 aaKnown RBP2.1□□□□□ -2.07
RIM1YCR028C-A YMR295CQ03559 197 aa2.1□□□□□ -2.07
RIM1YCR028C-A YDR029WQ12111 104 aa2.1□□□□□ -2.07
RIM1YCR028C-A YDR119W-AQ2V2P9 66 aa2.1□□□□□ -2.07
RIM1YCR028C-A YPL038W-AQ3E7B4 63 aa2.1□□□□□ -2.07
RIM1YCR028C-A YLR236CA0A023PZG4 107 aa2.09□□□□□ -2.07
RIM1YCR028C-A ECM12O13529 151 aa2.09□□□□□ -2.07
RIM1YCR028C-A YJR107C-AP0CT86 78 aa2.09□□□□□ -2.07
RIM1YCR028C-A YSY6P38374 65 aa2.09□□□□□ -2.07
RIM1YCR028C-A IRC21Q04772 201 aa2.09□□□□□ -2.07
RIM1YCR028C-A VAM10Q08474 114 aa2.09□□□□□ -2.07
RIM1YCR028C-A YBL112CQ3E7Y4 105 aa2.09□□□□□ -2.07
RIM1YCR028C-A YMR122W-AQ3E842 84 aa2.09□□□□□ -2.07
RIM1YCR028C-A YPL229WQ99395 206 aa2.09□□□□□ -2.07
RIM1YCR028C-A CDC39P25655 2108 aaKnown RBP2.09□□□□□ -2.08
RIM1YCR028C-A YFR035CP43608 114 aa2.08□□□□□ -2.08
RIM1YCR028C-A YMR175W-AQ3E766 64 aa2.08□□□□□ -2.08
RIM1YCR028C-A YGR240C-AQ3E786 66 aa2.08□□□□□ -2.08
RIM1YCR028C-A TSC3Q3E790 80 aa2.08□□□□□ -2.08
RIM1YCR028C-A YLL006W-AQ3E814 58 aa2.08□□□□□ -2.08
RIM1YCR028C-A YPR010C-AA5Z2X5 72 aa2.07□□□□□ -2.08
RIM1YCR028C-A YHL018WP38744 120 aaPredicted RBP2.07□□□□□ -2.08
RIM1YCR028C-A ERG28P40030 148 aa2.07□□□□□ -2.08
RIM1YCR028C-A ICY1Q04329 127 aa2.07□□□□□ -2.08
RIM1YCR028C-A YDL241WQ07738 123 aa2.07□□□□□ -2.08
RIM1YCR028C-A YOR034C-AQ3E735 80 aa2.07□□□□□ -2.08
RIM1YCR028C-A YLR285C-AQ3E771 56 aa2.07□□□□□ -2.08
RIM1YCR028C-A YLR361C-AQ3E795 98 aa2.07□□□□□ -2.08
RIM1YCR028C-A TAR1Q8TGM6 124 aa2.07□□□□□ -2.08
RIM1YCR028C-A Q0297Q9ZZV8 51 aa2.07□□□□□ -2.08
RIM1YCR028C-A BEM2P39960 2167 aaKnown RBP2.07□□□□□ -2.08
RIM1YCR028C-A ACC1Q00955 2233 aaKnown RBP2.06□□□□□ -2.08
RIM1YCR028C-A RPL26AP05743 127 aaKnown RBP2.06□□□□□ -2.08
RIM1YCR028C-A RPL29P05747 59 aaPredicted RBP2.06□□□□□ -2.08
RIM1YCR028C-A YBL081WP38180 368 aaKnown RBP2.06□□□□□ -2.08
RIM1YCR028C-A YBR219CP38317 127 aa2.06□□□□□ -2.08
RIM1YCR028C-A RPL26BP53221 127 aaKnown RBP2.06□□□□□ -2.08
RIM1YCR028C-A RSM19P53733 91 aaPredicted RBP2.06□□□□□ -2.08
RIM1YCR028C-A ATP18P81450 59 aa2.06□□□□□ -2.08
RIM1YCR028C-A YKL183C-AQ3E765 70 aa2.06□□□□□ -2.08
RIM1YCR028C-A SEC16P48415 2195 aaKnown RBP2.06□□□□□ -2.08
RIM1YCR028C-A YAL065CO13511 128 aa2.05□□□□□ -2.08
RIM1YCR028C-A YHR212W-AP0CX91 67 aa2.05□□□□□ -2.08
RIM1YCR028C-A TDA2P40045 126 aa2.05□□□□□ -2.08
RIM1YCR028C-A MPC3P53311 146 aa2.05□□□□□ -2.08
RIM1YCR028C-A BRR2P32639 2163 aaKnown RBP2.05□□□□□ -2.08
RIM1YCR028C-A YLR156WP0CE96 114 aa2.04□□□□□ -2.08
RIM1YCR028C-A YLR159WP0CE97 114 aa2.04□□□□□ -2.08
RIM1YCR028C-A YLR161WP0CE98 114 aa2.04□□□□□ -2.08
RIM1YCR028C-A YRA2P36036 203 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
RIM1YCR028C-A YER187WP40102 141 aa2.04□□□□□ -2.08
RIM1YCR028C-A RPC10P40422 70 aa2.04□□□□□ -2.08
RIM1YCR028C-A MVB12P42939 101 aa2.04□□□□□ -2.08
RIM1YCR028C-A YFL019CP43576 117 aa2.04□□□□□ -2.08
RIM1YCR028C-A SFT1P43682 97 aa2.04□□□□□ -2.08
RIM1YCR028C-A RPL38P49167 78 aaKnown RBP2.04□□□□□ -2.08
RIM1YCR028C-A YDR274CP87283 123 aa2.04□□□□□ -2.08
RIM1YCR028C-A YBL039W-BP0C268 59 aa2.03□□□□□ -2.08
RIM1YCR028C-A AQY2P0CD90 149 aa2.03□□□□□ -2.08
RIM1YCR028C-A YCR001WP25347 104 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms