RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C YGL088WP53151 121 aa9.61□□□□□ -0.87
SSA1YAL005C YBR209WP38311 105 aa9.6□□□□□ -0.87
SSA1YAL005C YOR008C-AQ3E7B9 74 aa9.6□□□□□ -0.87
SSA1YAL005C HMRA2P0CY13 119 aa9.6□□□□□ -0.87
SSA1YAL005C SPT4P32914 102 aaPredicted RBP9.6□□□□□ -0.87
SSA1YAL005C YGL015CP33199 130 aa9.6□□□□□ -0.87
SSA1YAL005C PAU16P35994 123 aa9.6□□□□□ -0.87
SSA1YAL005C YAR029WP39549 74 aa9.59□□□□□ -0.87
SSA1YAL005C RPR2P40571 144 aa9.59□□□□□ -0.87
SSA1YAL005C YLR112WQ12130 139 aa9.58□□□□□ -0.88
SSA1YAL005C ARC15P40518 154 aaRIP-Chip data9.58□□□□□ -0.88not detected
SSA1YAL005C COA3Q3E7B2 85 aa9.58□□□□□ -0.88
SSA1YAL005C NAT5Q08689 176 aa9.57□□□□□ -0.88
SSA1YAL005C YMR122W-AQ3E842 84 aa9.57□□□□□ -0.88
SSA1YAL005C FYV4P38783 130 aaPredicted RBP9.56□□□□□ -0.88
SSA1YAL005C MBF1O14467 151 aaKnown RBP9.56□□□□□ -0.88
SSA1YAL005C YGR164WP53291 111 aa9.56□□□□□ -0.88
SSA1YAL005C URM1P40554 99 aaPredicted RBP9.55□□□□□ -0.88
SSA1YAL005C APS1P35181 156 aa9.54□□□□□ -0.88
SSA1YAL005C CWP2P43497 92 aa9.54□□□□□ -0.88
SSA1YAL005C TRP1P00912 224 aa9.54□□□□□ -0.88
SSA1YAL005C ERI1P62651 68 aaKnown RBP9.54□□□□□ -0.88
SSA1YAL005C PAU23Q07987 124 aa9.54□□□□□ -0.88
SSA1YAL005C PAU17Q12370 124 aa9.54□□□□□ -0.88
SSA1YAL005C SCS22Q6Q595 175 aa9.54□□□□□ -0.88
SSA1YAL005C YPL229WQ99395 206 aa9.54□□□□□ -0.88
SSA1YAL005C ECM12O13529 151 aa9.53□□□□□ -0.88
SSA1YAL005C MDN1Q12019 4910 aaKnown RBP9.53□□□□□ -0.88
SSA1YAL005C CDC43P18898 376 aa9.52□□□□□ -0.88
SSA1YAL005C SPC1P46965 94 aa9.52□□□□□ -0.88
SSA1YAL005C YLL066W-BQ8TGJ7 56 aa9.52□□□□□ -0.89
SSA1YAL005C MSL1P40567 111 aaPredicted RBP9.51□□□□□ -0.89
SSA1YAL005C YEL008WP40001 126 aa9.5□□□□□ -0.89
SSA1YAL005C TSC3Q3E790 80 aa9.5□□□□□ -0.89
SSA1YAL005C YER175W-AQ8TGU4 54 aa9.5□□□□□ -0.89
SSA1YAL005C RPL33AP05744 107 aaKnown RBP9.49□□□□□ -0.89
SSA1YAL005C RPL33BP41056 107 aaKnown RBP9.49□□□□□ -0.89
SSA1YAL005C SEC11P15367 167 aa9.48□□□□□ -0.89
SSA1YAL005C YER181CP40097 107 aa9.48□□□□□ -0.89
SSA1YAL005C GAT4P40569 121 aa9.48□□□□□ -0.89
SSA1YAL005C PBA1Q05778 276 aa9.48□□□□□ -0.89
SSA1YAL005C KSH1Q8TGJ3 72 aa9.48□□□□□ -0.89
SSA1YAL005C YCL021W-AQ96VH3 125 aa9.48□□□□□ -0.89
SSA1YAL005C ATP15P21306 62 aa9.46□□□□□ -0.9
SSA1YAL005C PEX17P40155 199 aa9.45□□□□□ -0.9
SSA1YAL005C YBR219CP38317 127 aa9.44□□□□□ -0.9
SSA1YAL005C YGL034CP53186 121 aa9.44□□□□□ -0.9
SSA1YAL005C YDL022C-AP0C5L6 82 aa9.43□□□□□ -0.9
SSA1YAL005C YDR115WQ04598 105 aa9.43□□□□□ -0.9
SSA1YAL005C YDL157CQ12082 118 aa9.42□□□□□ -0.9
SSA1YAL005C RTC6O14464 93 aa9.41□□□□□ -0.9
SSA1YAL005C YCR085WP25650 117 aa9.4□□□□□ -0.9
SSA1YAL005C SVP26P38869 228 aa9.4□□□□□ -0.9
SSA1YAL005C RRT15Q3E811 62 aa9.4□□□□□ -0.9
SSA1YAL005C YPL261CQ08976 102 aa9.39□□□□□ -0.91
SSA1YAL005C YPR010C-AA5Z2X5 72 aa9.39□□□□□ -0.91
SSA1YAL005C YMR295CQ03559 197 aa9.39□□□□□ -0.91
SSA1YAL005C YLR194CQ05777 254 aa9.39□□□□□ -0.91
SSA1YAL005C DFM1Q12743 341 aaKnown RBP9.39□□□□□ -0.91
SSA1YAL005C YNL198CP40166 100 aa9.38□□□□□ -0.91
SSA1YAL005C SMP1P38128 452 aa9.37□□□□□ -0.91
SSA1YAL005C SMD1Q02260 146 aaPredicted RBP9.37□□□□□ -0.91
SSA1YAL005C YPR195CQ06594 109 aa9.37□□□□□ -0.91
SSA1YAL005C YHR139C-AO13536 103 aa9.35□□□□□ -0.91
SSA1YAL005C MID2P36027 376 aa9.35□□□□□ -0.91
SSA1YAL005C ATX1P38636 73 aa9.35□□□□□ -0.91
SSA1YAL005C YKL044WP36092 106 aa9.35□□□□□ -0.91
SSA1YAL005C ENV10Q99382 181 aa9.35□□□□□ -0.91
SSA1YAL005C YCR050CP25630 102 aa9.34□□□□□ -0.91
SSA1YAL005C MRP10O75012 95 aa9.33□□□□□ -0.92
SSA1YAL005C YEL067CP39978 195 aa9.33□□□□□ -0.92
SSA1YAL005C KNH1P50112 268 aa9.33□□□□□ -0.92
SSA1YAL005C YGL193CP53097 103 aa9.33□□□□□ -0.92
SSA1YAL005C KRE1P17260 313 aa9.33□□□□□ -0.92
SSA1YAL005C UBC4P15731 148 aa9.32□□□□□ -0.92
SSA1YAL005C SHU1P38751 150 aa9.31□□□□□ -0.92
SSA1YAL005C YOR376W-AQ3E805 51 aa9.31□□□□□ -0.92
SSA1YAL005C RPC10P40422 70 aa9.31□□□□□ -0.92
SSA1YAL005C YAL064WP39711 94 aa9.29□□□□□ -0.92
SSA1YAL005C YHL018WP38744 120 aaPredicted RBP9.29□□□□□ -0.92
SSA1YAL005C RPA12P32529 125 aaKnown RBP9.27□□□□□ -0.93
SSA1YAL005C MRPS12P53732 153 aa9.27□□□□□ -0.93
SSA1YAL005C YNR077CP53758 84 aa9.27□□□□□ -0.93
SSA1YAL005C YAL065CO13511 128 aa9.26□□□□□ -0.93
SSA1YAL005C VTC1P40046 129 aaRIP-Chip data9.26□□□□□ -0.93not detected
SSA1YAL005C YMR175W-AQ3E766 64 aa9.26□□□□□ -0.93
SSA1YAL005C COX14P39103 70 aa9.25□□□□□ -0.93
SSA1YAL005C YDR119W-AQ2V2P9 66 aa9.25□□□□□ -0.93
SSA1YAL005C YAR023CD6VPM8 179 aa9.25□□□□□ -0.93
SSA1YAL005C MIC10Q96VH5 97 aa9.25□□□□□ -0.93
SSA1YAL005C YNL190WP53872 204 aa9.19□□□□□ -0.94
SSA1YAL005C PPT2Q12036 173 aa9.19□□□□□ -0.94
SSA1YAL005C QCR8P08525 94 aa9.18□□□□□ -0.94
SSA1YAL005C SKI6P46948 246 aaPredicted RBP9.18□□□□□ -0.94
SSA1YAL005C YFR032C-BQ8TGU2 87 aa9.16□□□□□ -0.94
SSA1YAL005C YDL241WQ07738 123 aa9.15□□□□□ -0.94
SSA1YAL005C YIL102C-AQ2V2P5 75 aa9.15□□□□□ -0.95
SSA1YAL005C TDA8Q6B2U8 126 aa9.14□□□□□ -0.95
SSA1YAL005C TOM6P33448 61 aa9.13□□□□□ -0.95
SSA1YAL005C SNA2P56508 79 aa9.13□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 120.6 ms