RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ADSSP30520 456 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 TSPY1Q01534 308 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 NFE2Q16621 373 aaPredicted RBP11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 PKDCCQ504Y2 493 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 C10orf76Q5T2E6 689 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 KIAA1324Q6UXG2 1013 aaKnown RBP11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 C12orf40Q86WS4 652 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 CHPFQ8IZ52 775 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 FBXL16Q8N461 479 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 CADM4Q8NFZ8 388 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 OXER1Q8TDS5 423 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 IPO4Q8TEX9 1081 aaKnown RBP11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 PYM1Q9BRP8 204 aaKnown RBP11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 GPR174Q9BXC1 333 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 FAM117AQ9C073 453 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 GMIPQ9P107 970 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 DEC1Q9P2X7 70 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 UBR5O95071 2799 aaPredicted RBP11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 A0A1B0GVT2 93 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 A0A1W2PQF6 199 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 LACTBL1A8MY62 500 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 SAFBQ15424 915 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 RHBDF2Q6PJF5 856 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 KIAA1958Q8N8K9 716 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 NAT16Q8N8M0 369 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 SPIRE2Q8WWL2 714 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 FAM212AQ96EL1 285 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 TOE1Q96GM8 510 aaKnown RBP11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 TSPAN18Q96SJ8 248 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 ARHGAP28Q9P2N2 729 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 PCDHB6Q9Y5E3 794 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 PCDHGA1Q9Y5H4 931 aa11.82□□□□□ -0.52
PTP4A1-207ENST00000639568 COL6A6A6NMZ7 2263 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 SCAMP3O14828 347 aaKnown RBP11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 BRINP1O60477 761 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 PFKLP17858 780 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 RPA1P27694 616 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 CSNK1EP49674 416 aaKnown RBP11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 AFF3P51826 1226 aaKnown RBP11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 BNC1Q01954 994 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 GAD2Q05329 585 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 MCL1Q07820 350 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 TEAD4Q15561 434 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 KYAT1Q16773 422 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 EARS2Q5JPH6 523 aaKnown RBP11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 DCAF12L1Q5VU92 463 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 SPATA1Q5VX52 437 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 C9orf57Q5W0N0 161 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 WSCD1Q658N2 575 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 TAS1R3Q7RTX0 852 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 ZNF248Q8NDW4 579 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 NAF1Q96HR8 494 aaKnown RBP11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 MRGPRX1Q96LB2 322 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 MTMR9Q96QG7 549 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 TRIM4Q9C037 500 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 BHMT2Q9H2M3 363 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 CPNE5Q9HCH3 593 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 BRMS1Q9HCU9 246 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 CD93Q9NPY3 652 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 TBC1D14Q9P2M4 693 aa11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 EIF2B4Q9UI10 523 aaKnown RBP11.81□□□□□ -0.52
PTP4A1-207ENST00000639568 SLC16A4O15374 487 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 PCDHGA12O60330 932 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 C1SP09871 688 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 RPS6KB1P23443 525 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 CYP2F1P24903 491 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 CCT8P50990 548 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 CLDN6P56747 220 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 ZXDBP98169 803 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 KIF19Q2TAC6 998 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 TBC1D25Q3MII6 688 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 LY6G5CQ5SRR4 150 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 USP49Q70CQ1 688 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 SCN4BQ8IWT1 228 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 AGXT2Q9BYV1 514 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 SLC6A17Q9H1V8 727 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 ABCB6Q9NP58 842 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 TMLHEQ9NVH6 421 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 SMPD4Q9NXE4 827 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 WSB2Q9NYS7 404 aaPredicted RBP11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 TRPM5Q9NZQ8 1165 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 CFAP97Q9P2B7 532 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 SNX11Q9Y5W9 270 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 KIAA1549LQ6ZVL6 1849 aa11.8□□□□□ -0.52
PTP4A1-207ENST00000639568 E2F8A0AVK6 867 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 METTL12A8MUP2 240 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 PIRO00625 290 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 TULP3O75386 442 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 RFPL3O75679 317 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 CDKL5O76039 1030 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 OXTRP30559 389 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 TAF6P49848 677 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 EVCP57679 992 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 ANO4Q32M45 955 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 HES3Q5TGS1 186 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 EGFLAMQ63HQ2 1017 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 ZPBP2Q6X784 338 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 ZNF574Q6ZN55 896 aaPredicted RBP11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 ERICH1Q86X53 443 aa11.79□□□□□ -0.52
PTP4A1-207ENST00000639568 DDX42Q86XP3 938 aaKnown RBP eCLIP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms