RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 TNK2Q07912 1038 aa20.45■□□□□ 0.86
TCF3-219ENST00000610756 ITPRIPL2Q3MIP1 535 aa20.45■□□□□ 0.86
TCF3-219ENST00000610756 CC2D1AQ6P1N0 951 aaPredicted RBP20.45■□□□□ 0.86
TCF3-219ENST00000610756 PDZD8Q8NEN9 1154 aa20.45■□□□□ 0.86
TCF3-219ENST00000610756 ZMIZ2Q8NF64 920 aa20.45■□□□□ 0.86
TCF3-219ENST00000610756 SCAMP5Q8TAC9 235 aa20.45■□□□□ 0.86
TCF3-219ENST00000610756 RIN3Q8TB24 985 aa20.45■□□□□ 0.86
TCF3-219ENST00000610756 PHOX2BQ99453 314 aa20.45■□□□□ 0.86
TCF3-219ENST00000610756 KRT82Q9NSB4 513 aa20.45■□□□□ 0.86
TCF3-219ENST00000610756 CISHQ9NSE2 258 aa20.45■□□□□ 0.86
TCF3-219ENST00000610756 FAM49BQ9NUQ9 324 aa20.45■□□□□ 0.86
TCF3-219ENST00000610756 ARHGAP26Q9UNA1 814 aa20.45■□□□□ 0.86
TCF3-219ENST00000610756 MYO15AQ9UKN7 3530 aa20.44■□□□□ 0.86
TCF3-219ENST00000610756 BEST1O76090 585 aa20.44■□□□□ 0.86
TCF3-219ENST00000610756 GNA14O95837 355 aa20.44■□□□□ 0.86
TCF3-219ENST00000610756 PAK1Q13153 545 aa20.44■□□□□ 0.86
TCF3-219ENST00000610756 SNX30Q5VWJ9 437 aa20.44■□□□□ 0.86
TCF3-219ENST00000610756 MAMSTRQ6ZN01 415 aa20.44■□□□□ 0.86
TCF3-219ENST00000610756 RNF38Q9H0F5 515 aa20.44■□□□□ 0.86
TCF3-219ENST00000610756 FAM86C1Q9NVL1 165 aa20.44■□□□□ 0.86
TCF3-219ENST00000610756 CHORDC1Q9UHD1 332 aaPredicted RBP20.44■□□□□ 0.86
TCF3-219ENST00000610756 NDRG2Q9UN36 371 aaKnown RBP20.44■□□□□ 0.86
TCF3-219ENST00000610756 DMDP11532 3685 aa20.44■□□□□ 0.86
TCF3-219ENST00000610756 PROB1E7EW31 1015 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 SPECC1L-ADORA2AF8WAN1 911 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 OLFM2O95897 454 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 OAS1P00973 400 aaKnown RBP20.43■□□□□ 0.86
TCF3-219ENST00000610756 FAM200BP0CF97 657 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 CTHP32929 405 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 NBL1P41271 181 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 SOX9P48436 509 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 FMO5P49326 533 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 SLC5A3P53794 718 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 MARSP56192 900 aaKnown RBP20.43■□□□□ 0.86
TCF3-219ENST00000610756 MAP3K7CLP57077 242 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 SLC7A9P82251 487 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 RUNX3Q13761 415 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 PDGFRLQ15198 375 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 ZNF77Q15935 545 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 CCDC40Q4G0X9 1142 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 ALYREFQ86V81 257 aaKnown RBP20.43■□□□□ 0.86
TCF3-219ENST00000610756 KIAA1958Q8N8K9 716 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 TTC8Q8TAM2 541 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 SH3RF2Q8TEC5 729 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 FBXO32Q969P5 355 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 TMEM176AQ96HP8 235 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 HEXIM2Q96MH2 286 aaKnown RBP20.43■□□□□ 0.86
TCF3-219ENST00000610756 LMAN1LQ9HAT1 526 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 HPS4Q9NQG7 708 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 CTNND2Q9UQB3 1225 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 COL4A3Q01955 1670 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 PTPRDP23468 1912 aa20.43■□□□□ 0.86
TCF3-219ENST00000610756 NUP210Q8TEM1 1887 aaPredicted RBP20.42■□□□□ 0.86
TCF3-219ENST00000610756 P4HA2O15460 535 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 ABL1P00519 1130 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 CHRNB1P11230 501 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 ADORA2BP29275 332 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 MRE11P49959 708 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 STX17P56962 302 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 ZXDBP98169 803 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 IFRD2Q12894 506 aaPredicted RBP20.42■□□□□ 0.86
TCF3-219ENST00000610756 MTF1Q14872 753 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 CLEC20AQ6ZU45 233 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 MAML2Q8IZL2 1156 aaPredicted RBP20.42■□□□□ 0.86
TCF3-219ENST00000610756 OSCP1Q8WVF1 389 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 SRRTQ9BXP5 876 aaKnown RBP20.42■□□□□ 0.86
TCF3-219ENST00000610756 FBXO44Q9H4M3 255 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 EBF3Q9H4W6 596 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 PNPLA8Q9NP80 782 aa20.42■□□□□ 0.86
TCF3-219ENST00000610756 SPATA6Q9NWH7 488 aaPredicted RBP20.42■□□□□ 0.86
TCF3-219ENST00000610756 OTOL1A6NHN0 477 aaPredicted RBP20.41■□□□□ 0.86
TCF3-219ENST00000610756 FGFR1OPO95684 399 aaKnown RBP20.41■□□□□ 0.86
TCF3-219ENST00000610756 ZDHHC11BP0C7U3 371 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 RAD23BP54727 409 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 AMPD2Q01433 879 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 USP4Q13107 963 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 CUL2Q13617 745 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 ZNF394Q53GI3 561 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 PPP1R26Q5T8A7 1209 aaPredicted RBP20.41■□□□□ 0.86
TCF3-219ENST00000610756 TRIM68Q6AZZ1 485 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 TXNDC11Q6PKC3 985 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 TRIM59Q8IWR1 403 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 SLC4A11Q8NBS3 891 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 ARID3AQ99856 593 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 IER2Q9BTL4 223 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 DUSP16Q9BY84 665 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 DUS2Q9NX74 493 aaKnown RBP20.41■□□□□ 0.86
TCF3-219ENST00000610756 RWDD2AQ9UIY3 292 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 FBXO4Q9UKT5 387 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 DENND4CQ5VZ89 1909 aa20.41■□□□□ 0.86
TCF3-219ENST00000610756 GREB1Q4ZG55 1949 aa20.4■□□□□ 0.86
TCF3-219ENST00000610756 HHLA1C9JL84 531 aa20.4■□□□□ 0.86
TCF3-219ENST00000610756 LAMTOR5O43504 91 aa20.4■□□□□ 0.86
TCF3-219ENST00000610756 TUBP50607 506 aa20.4■□□□□ 0.86
TCF3-219ENST00000610756 CETN1Q12798 172 aa20.4■□□□□ 0.86
TCF3-219ENST00000610756 ZNF528Q3MIS6 628 aa20.4■□□□□ 0.86
TCF3-219ENST00000610756 MLKLQ8NB16 471 aa20.4■□□□□ 0.86
TCF3-219ENST00000610756 UBXN6Q9BZV1 441 aa20.4■□□□□ 0.86
TCF3-219ENST00000610756 CHRDQ9H2X0 955 aa20.4■□□□□ 0.86
TCF3-219ENST00000610756 CLSTN2Q9H4D0 955 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms