RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 CAPN8A6NHC0 703 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 EIF4E1BA6NMX2 242 aaKnown RBP9.33□□□□□ -0.92
SMAD4-215ENST00000592911 ZBTB24O43167 697 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-215ENST00000592911 GJB3O75712 270 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 OLFM2O95897 454 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 GNSP15586 552 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 HDCP19113 662 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 NMT1P30419 496 aaKnown RBP9.33□□□□□ -0.92
SMAD4-215ENST00000592911 KIR2DL1P43626 348 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-215ENST00000592911 MAPK8P45983 427 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 GTF2BQ00403 316 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 SCAPQ12770 1279 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 E2F5Q15329 346 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 TRIP6Q15654 476 aaKnown RBP9.33□□□□□ -0.92
SMAD4-215ENST00000592911 SEZ6Q53EL9 994 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 C2orf27AQ580R0 203 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 INTS6LQ5JSJ4 861 aaKnown RBP9.33□□□□□ -0.92
SMAD4-215ENST00000592911 WSCD1Q658N2 575 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 KIAA1211LQ6NV74 962 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 SCUBE3Q8IX30 993 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 TOP6BLQ8N6T0 577 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 IL17RCQ8NAC3 791 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 SH3RF2Q8TEC5 729 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 FOXJ1Q92949 421 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 AK8Q96MA6 479 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 PKMYT1Q99640 499 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 KIF2CQ99661 725 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 TTLL2Q9BWV7 592 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 PARVGQ9HBI0 331 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 GDAP2Q9NXN4 497 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 DPP3Q9NY33 737 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 STARD13Q9Y3M8 1113 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 PCDHB9Q9Y5E1 797 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 WNT6Q9Y6F9 365 aa9.33□□□□□ -0.92
SMAD4-215ENST00000592911 SPAARA0A1B0GVQ0 90 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 GABRDO14764 452 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 PPEF2O14830 753 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 HUS1O60921 280 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 KAT7O95251 611 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 CFIP05156 583 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 FAM163BP0C2L3 166 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 CD59P13987 128 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 PTGER3P43115 390 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 ZNF132P52740 706 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 NOP14P78316 857 aaKnown RBP9.32□□□□□ -0.92
SMAD4-215ENST00000592911 SPAG1Q07617 926 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 GNL2Q13823 731 aaKnown RBP9.32□□□□□ -0.92
SMAD4-215ENST00000592911 GAB4Q2WGN9 574 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 SYCP2LQ5T4T6 812 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 ARL6IP4Q66PJ3 421 aaKnown RBP9.32□□□□□ -0.92
SMAD4-215ENST00000592911 ADGRG2Q8IZP9 1017 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 MINDY1Q8N5J2 469 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 CACTINQ8WUQ7 758 aaKnown RBP9.32□□□□□ -0.92
SMAD4-215ENST00000592911 OVCA2Q8WZ82 227 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 YTHDC1Q96MU7 727 aaKnown RBP9.32□□□□□ -0.92
SMAD4-215ENST00000592911 MMTAG2Q9BU76 263 aaKnown RBP9.32□□□□□ -0.92
SMAD4-215ENST00000592911 POLD4Q9HCU8 107 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 TMEM74BQ9NUR3 256 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 TRPM5Q9NZQ8 1165 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 BCCIPQ9P287 314 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMAD4-215ENST00000592911 MBD1Q9UIS9 605 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-215ENST00000592911 MAGED2Q9UNF1 606 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-215ENST00000592911 PCDHGB2Q9Y5G2 931 aa9.32□□□□□ -0.92
SMAD4-215ENST00000592911 A0A087WV48 116 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 E2F8A0AVK6 867 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 RCCD1A6NED2 376 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 K7ENM7 598 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 TRIM66O15016 1216 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 HOXC11O43248 304 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-215ENST00000592911 JAK2O60674 1132 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 DKK1O94907 266 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 CYP17A1P05093 508 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 FTH1P19P0C7X4 201 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 PLA2G4BP0C869 781 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 ITPKAP23677 461 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 GUCY2FP51841 1108 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 RPL6Q02878 288 aaKnown RBP9.31□□□□□ -0.92
SMAD4-215ENST00000592911 ZNF33AQ06730 810 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 RESTQ13127 1097 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 DHCR24Q15392 516 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 RILPL1Q5EBL4 403 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 WDR45BQ5MNZ6 344 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 FAM171BQ6P995 826 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 IL27RAQ6UWB1 636 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 TOGARAM2Q6ZUX3 1019 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 SPATA2LQ8IUW3 424 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-215ENST00000592911 TMEFF1Q8IYR6 380 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 GALNT15Q8N3T1 639 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 PDCL2Q8N4E4 241 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 CHCHD4Q8N4Q1 142 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 NECAB1Q8N987 351 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 TXNDC5Q8NBS9 432 aaKnown RBP9.31□□□□□ -0.92
SMAD4-215ENST00000592911 ZNF419Q96HQ0 510 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-215ENST00000592911 CDK5RAP3Q96JB5 506 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 ZFRQ96KR1 1074 aaKnown RBP9.31□□□□□ -0.92
SMAD4-215ENST00000592911 UBL7Q96S82 380 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-215ENST00000592911 CDC6Q99741 560 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 TRPC7Q9HCX4 862 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 POLR3BQ9NW08 1133 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms