RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 PMF1Q6P1K2 205 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 ALKBH5Q6P6C2 394 aaKnown RBP11.25□□□□□ -0.61
SMAD4-214ENST00000592186 PASD1Q8IV76 773 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 SIX6OS1Q8N1H7 587 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 SCML4Q8N228 414 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 TXLNBQ8N3L3 684 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 LEMD2Q8NC56 503 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 ZMIZ2Q8NF64 920 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 IPO4Q8TEX9 1081 aaKnown RBP11.25□□□□□ -0.61
SMAD4-214ENST00000592186 CPA5Q8WXQ8 436 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 C18orf8Q96DM3 657 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 MYRFLQ96LU7 910 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 FAM161BQ96MY7 647 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 PCDHB18PQ96TA0 734 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 CDX2Q99626 313 aaPredicted RBP11.25□□□□□ -0.61
SMAD4-214ENST00000592186 TRIM62Q9BVG3 475 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 SLC4A5Q9BY07 1137 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 RHOBTB2Q9BYZ6 727 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 ISCUQ9H1K1 167 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 CRISPLD1Q9H336 500 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 CNGB3Q9NQW8 809 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 MAN1C1Q9NR34 630 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 ST7Q9NRC1 585 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 UXTQ9UBK9 157 aaPredicted RBP11.25□□□□□ -0.61
SMAD4-214ENST00000592186 NAGPAQ9UK23 515 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 STRIP2Q9ULQ0 834 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 YIPF1Q9Y548 306 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 TSC2P49815 1807 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 LAMA3Q16787 3333 aa11.25□□□□□ -0.61
SMAD4-214ENST00000592186 SLC38A8A6NNN8 435 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 EIF3CLB5ME19 914 aaKnown RBP11.24□□□□□ -0.61
SMAD4-214ENST00000592186 HHLA1C9JL84 531 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 TNFRSF10BO14763 440 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 BEST1O76090 585 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 LCA5LO95447 670 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 CALB1P05937 261 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 PTPN2P17706 415 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 YWHAQP27348 245 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 SSTR3P32745 418 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-214ENST00000592186 GABRB2P47870 512 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 TKTL1P51854 596 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 CACNA2D1P54289 1103 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 KRT83P78385 493 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 ZNF268Q14587 947 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-214ENST00000592186 COL19A1Q14993 1142 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 CTC1Q2NKJ3 1217 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 CCDC122Q5T0U0 273 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 PM20D1Q6GTS8 502 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 LLGL2Q6P1M3 1020 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 DNAJB7Q7Z6W7 309 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-214ENST00000592186 MON1AQ86VX9 555 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 GPIHBP1Q8IV16 184 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 ARHGAP18Q8N392 663 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 C1orf131Q8NDD1 294 aaKnown RBP11.24□□□□□ -0.61
SMAD4-214ENST00000592186 IRGQQ8WZA9 623 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 PSMG2Q969U7 264 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 TRMT2BQ96GJ1 504 aaKnown RBP11.24□□□□□ -0.61
SMAD4-214ENST00000592186 EIF3CQ99613 913 aaKnown RBP11.24□□□□□ -0.61
SMAD4-214ENST00000592186 PRKD2Q9BZL6 878 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 SFXN1Q9H9B4 322 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 IL37Q9NZH6 218 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 ADAM22Q9P0K1 906 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 INTUQ9ULD6 942 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 USP3Q9Y6I4 520 aa11.24□□□□□ -0.61
SMAD4-214ENST00000592186 CCDC195A0A1B0GUA6 201 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 NDUFA10O95299 355 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 ZBED1O96006 694 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 GLI1P08151 1106 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 ATF6P18850 670 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 SCNN1AP37088 669 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 PSEN1P49768 467 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 CDR1P51861 262 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 SLC5A3P53794 718 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 ITIH3Q06033 890 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 GFPT1Q06210 699 aaPredicted RBP11.23□□□□□ -0.61
SMAD4-214ENST00000592186 EFHC1Q5JVL4 640 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 TOGARAM2Q6ZUX3 1019 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 TMEM139Q8IV31 216 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 SCUBE3Q8IX30 993 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 TTC9BQ8N6N2 239 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 PDZD8Q8NEN9 1154 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 GIPC2Q8TF65 315 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 OVCA2Q8WZ82 227 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 GOLGA1Q92805 767 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 PABPC5Q96DU9 382 aaKnown RBP11.23□□□□□ -0.61
SMAD4-214ENST00000592186 SLITRK1Q96PX8 696 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 TTLL2Q9BWV7 592 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 TMEM30AQ9NV96 361 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 MTMR10Q9NXD2 777 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 SCML2Q9UQR0 700 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 TRIOBPQ9H2D6 2365 aa11.23□□□□□ -0.61
SMAD4-214ENST00000592186 NCANO14594 1321 aa11.22□□□□□ -0.61
SMAD4-214ENST00000592186 FAM92AA1XBS5 289 aa11.22□□□□□ -0.61
SMAD4-214ENST00000592186 ANKRD62A6NC57 917 aa11.22□□□□□ -0.61
SMAD4-214ENST00000592186 SOWAHDA6NJG2 315 aa11.22□□□□□ -0.61
SMAD4-214ENST00000592186 SOBPA7XYQ1 873 aa11.22□□□□□ -0.61
SMAD4-214ENST00000592186 TMCO5BA8MYB1 307 aa11.22□□□□□ -0.61
SMAD4-214ENST00000592186 ESPNB1AK53 854 aa11.22□□□□□ -0.61
SMAD4-214ENST00000592186 TULP2O00295 520 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms