RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 LRRC10BA6NIK2 292 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 O00370 1275 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 GALR2O43603 387 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 PI15O43692 258 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 VDRP11473 427 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 ATP1A3P13637 1013 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 MAP3K7CLP57077 242 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 GPC5P78333 572 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 FAM78AQ5JUQ0 283 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 GPR158Q5T848 1215 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 GPRIN1Q7Z2K8 1008 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 TTC30AQ86WT1 665 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 ZSCAN18Q8TBC5 510 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 FAM81BQ96LP2 452 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 HEXIM2Q96MH2 286 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 ZSWIM1Q9BR11 485 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 TASP1Q9H6P5 420 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 TRPV4Q9HBA0 871 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 EHD2Q9NZN4 543 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 TSPAN16Q9UKR8 245 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 CA14Q9ULX7 337 aa16.4■□□□□ 0.22
RABGGTA-219ENST00000560871 LGALS16A8MUM7 142 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 BECN2A8MW95 431 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 PES1O00541 588 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 ECI2O75521 394 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 RTN3O95197 1032 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 DDX6P26196 483 aaKnown RBP eCLIP16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 WEE1P30291 646 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 GOLGA7BQ2TAP0 167 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 ARHGAP15Q53QZ3 475 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 SGO2Q562F6 1265 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 SMYD5Q6GMV2 418 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 TANGO2Q6ICL3 276 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 TFAP2BQ92481 460 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 SHC3Q92529 594 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 SMARCD2Q92925 531 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 ELSPBP1Q96BH3 223 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 DUSP16Q9BY84 665 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 SLITRK6Q9H5Y7 841 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 ZMYM5Q9UJ78 669 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 KIAA1257Q9ULG3 409 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 ZDBF2Q9HCK1 2354 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 DENND4CQ5VZ89 1909 aa16.39■□□□□ 0.21
RABGGTA-219ENST00000560871 SOBPA7XYQ1 873 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 SMTNL1A8MU46 457 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 PRAMEF12O95522 483 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 CD19P15391 556 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 MFAP3P55082 362 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 IFRD2Q12894 506 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 TAF10Q12962 218 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 PKDCCQ504Y2 493 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 KLHDC7AQ5VTJ3 777 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 ANKRD52Q8NB46 1076 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 ANKRD20A12PQ8NF67 263 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 SCAMP5Q8TAC9 235 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 MRPS31Q92665 395 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 RSPRY1Q96DX4 576 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 KXD1Q9BQD3 176 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 LSM14BQ9BX40 385 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 NAA15Q9BXJ9 866 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 SLC46A2Q9BY10 475 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 PLA2G2FQ9BZM2 168 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 IRF2BPLQ9H1B7 796 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 GANQ9H2C0 597 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 CBX8Q9HC52 389 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 PLCB1Q9NQ66 1216 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 COMMD8Q9NX08 183 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 SIK3Q9Y2K2 1263 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 FHOD1Q9Y613 1164 aa16.38■□□□□ 0.21
RABGGTA-219ENST00000560871 CALCAP01258 141 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 TPM2P07951 284 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 ZDHHC11BP0C7U3 371 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 KRT5P13647 590 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 RFX1P22670 979 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 BRD2P25440 801 aaKnown RBP16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 YWHAQP27348 245 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 KLK7P49862 253 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 BCAT1P54687 386 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 ARHGAP44Q17R89 818 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 TXNDC8Q6A555 127 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 VITQ6UXI7 678 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 ALYREFQ86V81 257 aaKnown RBP16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 MON1AQ86VX9 555 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 ARID3BQ8IVW6 561 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 CMTM8Q8IZV2 173 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 MAB21L3Q8N8X9 362 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 OVCA2Q8WZ82 227 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 FBXO32Q969P5 355 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 SLITRK1Q96PX8 696 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 PHOX2BQ99453 314 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 TBC1D17Q9HA65 648 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 ARHGEF3Q9NR81 526 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 DNAJC12Q9UKB3 198 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 WDFY4Q6ZS81 3184 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 KIF26AQ9ULI4 1882 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 MIA3Q5JRA6 1907 aa16.37■□□□□ 0.21
RABGGTA-219ENST00000560871 COL4A2P08572 1712 aa16.36■□□□□ 0.21
RABGGTA-219ENST00000560871 C2orf78A6NCI8 922 aa16.36■□□□□ 0.21
RABGGTA-219ENST00000560871 ZNF840PA6NDX5 716 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms