RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ALG3Q92685 438 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 ZNF558Q96NG5 402 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 HERC2P3Q9BVR0 1158 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 GPR62Q9BZJ7 368 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 AAASQ9NRG9 546 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.44□□□□□ -0.58
PABPN1-203ENST00000553960 HOMER3Q9NSC5 361 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.44□□□□□ -0.58
PABPN1-203ENST00000553960 PRKAG2Q9UGJ0 569 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 SSX2IPQ9Y2D8 614 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 RWDD3Q9Y3V2 267 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 INSL6Q9Y581 213 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 PLXNA3P51805 1871 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 BHMG1C9JSJ3 638 aaPredicted RBP11.43□□□□□ -0.58
PABPN1-203ENST00000553960 PGRMC1O00264 195 aaKnown RBP11.43□□□□□ -0.58
PABPN1-203ENST00000553960 DYNC1I1O14576 645 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 TRIM66O15016 1216 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 LILRB3O75022 631 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 ATP2C2O75185 946 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 ABLIM3O94929 683 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 CLSTN1O94985 981 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 DESP17661 470 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 NOS2P35228 1153 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 MATKP42679 507 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 MTA1Q13330 715 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 MESDQ14696 234 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 BOLA3Q53S33 107 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 MDH1BQ5I0G3 518 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 ACBD5Q5T8D3 534 aaPredicted RBP11.43□□□□□ -0.58
PABPN1-203ENST00000553960 DCAF12L1Q5VU92 463 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 DRICH1Q6PGQ1 229 aaPredicted RBP11.43□□□□□ -0.58
PABPN1-203ENST00000553960 DNAAF5Q86Y56 855 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 RCOR2Q8IZ40 523 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 GPR161Q8N6U8 529 aaKnown RBP11.43□□□□□ -0.58
PABPN1-203ENST00000553960 C12orf50Q8NA57 414 aaPredicted RBP11.43□□□□□ -0.58
PABPN1-203ENST00000553960 SPATA4Q8NEY3 305 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 UBA3Q8TBC4 463 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 SLCO2A1Q92959 643 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 RUNDC3BQ96NL0 473 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 FRMD8P1Q9BZ68 369 aaPredicted RBP11.43□□□□□ -0.58
PABPN1-203ENST00000553960 MTIF3Q9H2K0 278 aaKnown RBP11.43□□□□□ -0.58
PABPN1-203ENST00000553960 SYNCQ9H7C4 482 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 RXFP1Q9HBX9 757 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 FAM49BQ9NUQ9 324 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 SPG21Q9NZD8 308 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 GREB1Q4ZG55 1949 aa11.43□□□□□ -0.58
PABPN1-203ENST00000553960 C5orf67F2Z3F1 127 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 PDE2AO00408 941 aaPredicted RBP11.42□□□□□ -0.58
PABPN1-203ENST00000553960 MDM4O15151 490 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 ATMINO43313 823 aaPredicted RBP11.42□□□□□ -0.58
PABPN1-203ENST00000553960 SPOPO43791 374 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 LRCH4O75427 683 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 DAB1O75553 588 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 AP1G2O75843 785 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 PAPLNO95428 1278 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 GPD1P21695 349 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 PSEN1P49768 467 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 DAOAP59103 153 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 YWHAZP63104 245 aaKnown RBP11.42□□□□□ -0.58
PABPN1-203ENST00000553960 OGDHQ02218 1023 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 SLC25A11Q02978 314 aaKnown RBP11.42□□□□□ -0.58
PABPN1-203ENST00000553960 UBE3AQ05086 875 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 NNTQ13423 1086 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 HADHQ16836 314 aaKnown RBP11.42□□□□□ -0.58
PABPN1-203ENST00000553960 SLC25A52Q3SY17 297 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 FAM171A1Q5VUB5 890 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 SNX30Q5VWJ9 437 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 FAM183BPQ6ZVS7 135 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 BHLHA9Q7RTU4 235 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 ARFGAP1Q8N6T3 406 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.42□□□□□ -0.58
PABPN1-203ENST00000553960 OVCA2Q8WZ82 227 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 MYLPFQ96A32 169 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 NTAN1Q96AB6 310 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 RBM41Q96IZ5 413 aaKnown RBP11.42□□□□□ -0.58
PABPN1-203ENST00000553960 MCEEQ96PE7 176 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 NPY6RQ99463 290 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 RAD9AQ99638 391 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 TTLL2Q9BWV7 592 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 TRIM7Q9C029 511 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 FBXO44Q9H4M3 255 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 KRT82Q9NSB4 513 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 TMEM30AQ9NV96 361 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 EHD2Q9NZN4 543 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 RCOR3Q9P2K3 495 aaPredicted RBP11.42□□□□□ -0.58
PABPN1-203ENST00000553960 CACNG4Q9UBN1 327 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 PCDHB5Q9Y5E4 795 aa11.42□□□□□ -0.58
PABPN1-203ENST00000553960 TULP2O00295 520 aa11.41□□□□□ -0.58
PABPN1-203ENST00000553960 KCNK3O14649 394 aa11.41□□□□□ -0.58
PABPN1-203ENST00000553960 RNF8O76064 485 aa11.41□□□□□ -0.58
PABPN1-203ENST00000553960 RTN3O95197 1032 aaPredicted RBP11.41□□□□□ -0.58
PABPN1-203ENST00000553960 ZRANB2O95218 330 aaKnown RBP eCLIP11.41□□□□□ -0.58
PABPN1-203ENST00000553960 ZBED1O96006 694 aa11.41□□□□□ -0.58
PABPN1-203ENST00000553960 F9P00740 461 aa11.41□□□□□ -0.58
PABPN1-203ENST00000553960 IGLV3-25P01717 112 aa11.41□□□□□ -0.58
PABPN1-203ENST00000553960 RB1P06400 928 aa11.41□□□□□ -0.58
PABPN1-203ENST00000553960 CETN2P41208 172 aa11.41□□□□□ -0.58
PABPN1-203ENST00000553960 ARSEP51690 589 aa11.41□□□□□ -0.58
PABPN1-203ENST00000553960 DEFB103AP81534 67 aa11.41□□□□□ -0.58
PABPN1-203ENST00000553960 SCAPQ12770 1279 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms