RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 SNX3O60493 162 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 CDH16O75309 829 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 DNAJC3Q13217 504 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 BBS9Q3SYG4 887 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 PRAMEF19Q5SWL8 479 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 FAM183BPQ6ZVS7 135 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 ACOT1Q86TX2 421 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 IGDCC3Q8IVU1 814 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 KIF2BQ8N4N8 673 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 MAML1Q92585 1016 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 ZMAT2Q96NC0 199 aaKnown RBP15.46■□□□□ 0.07
DDX55-209ENST00000542286 MRPL45Q9BRJ2 306 aaKnown RBP15.46■□□□□ 0.07
DDX55-209ENST00000542286 MIS12Q9H081 205 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 STMN4Q9H169 189 aaPredicted RBP15.46■□□□□ 0.07
DDX55-209ENST00000542286 SETD4Q9NVD3 440 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 TSPAN16Q9UKR8 245 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 USP18Q9UMW8 372 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 HTTP42858 3142 aa15.46■□□□□ 0.07
DDX55-209ENST00000542286 CXCL11O14625 94 aa15.46■□□□□ 0.06
DDX55-209ENST00000542286 NCALDP61601 193 aa15.46■□□□□ 0.06
DDX55-209ENST00000542286 CAV1Q03135 178 aa15.46■□□□□ 0.06
DDX55-209ENST00000542286 GRM1Q13255 1194 aa15.46■□□□□ 0.06
DDX55-209ENST00000542286 SMAD1Q15797 465 aaKnown RBP15.46■□□□□ 0.06
DDX55-209ENST00000542286 NBPF20Q3BBV1 942 aa15.46■□□□□ 0.06
DDX55-209ENST00000542286 THEMIS2Q5TEJ8 643 aa15.46■□□□□ 0.06
DDX55-209ENST00000542286 SCUBE3Q8IX30 993 aa15.46■□□□□ 0.06
DDX55-209ENST00000542286 CLEC4CQ8WTT0 213 aa15.46■□□□□ 0.06
DDX55-209ENST00000542286 KIF12Q96FN5 646 aa15.46■□□□□ 0.06
DDX55-209ENST00000542286 EURLQ9NYK6 297 aa15.46■□□□□ 0.06
DDX55-209ENST00000542286 SBF1O95248 1867 aa15.46■□□□□ 0.06
DDX55-209ENST00000542286 A8MUI8 341 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 IGF2BP3O00425 579 aaKnown RBP eCLIP15.45■□□□□ 0.06
DDX55-209ENST00000542286 AP1G2O75843 785 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 RPA3P35244 121 aaPredicted RBP15.45■□□□□ 0.06
DDX55-209ENST00000542286 PHKA2P46019 1235 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 CDH6P55285 790 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 TMEM132DQ14C87 1099 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 CA9Q16790 459 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 RXFP2Q8WXD0 754 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 EIF2AQ9BY44 585 aaKnown RBP15.45■□□□□ 0.06
DDX55-209ENST00000542286 ECT2Q9H8V3 914 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 SNTG2Q9NY99 539 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 TUBGCP4Q9UGJ1 667 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 KCNH4Q9UQ05 1017 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 SNX9Q9Y5X1 595 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 TSPAN1O60635 241 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 FGFR1P11362 822 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 MGAT5Q09328 741 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 BLMHQ13867 455 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 PPP1R26Q5T8A7 1209 aaPredicted RBP15.45■□□□□ 0.06
DDX55-209ENST00000542286 PMF1Q6P1K2 205 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 SPATA18Q8TC71 538 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 RSAD2Q8WXG1 361 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 C16orf70Q9BSU1 422 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 FAM167BQ9BTA0 163 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 MAK16Q9BXY0 300 aaKnown RBP15.45■□□□□ 0.06
DDX55-209ENST00000542286 ZNF518BQ9C0D4 1074 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 DPEP3Q9H4B8 488 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 NGRNQ9NPE2 291 aaKnown RBP15.45■□□□□ 0.06
DDX55-209ENST00000542286 PRMT7Q9NVM4 692 aaPredicted RBP15.45■□□□□ 0.06
DDX55-209ENST00000542286 DPP3Q9NY33 737 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 ETAA1Q9NY74 926 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 KLK14Q9P0G3 267 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 CHMP2BQ9UQN3 213 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 HEY1Q9Y5J3 304 aa15.45■□□□□ 0.06
DDX55-209ENST00000542286 RBP3P10745 1247 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 PDGFRAP16234 1089 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 OSBPP22059 807 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 AKAP5P24588 427 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 EIF3EP60228 445 aaKnown RBP15.44■□□□□ 0.06
DDX55-209ENST00000542286 PPIL2Q13356 520 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 SLC1A5Q15758 541 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 LRRC38Q5VT99 294 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 SESTD1Q86VW0 696 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 C7orf31Q8N865 590 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 CKAP2Q8WWK9 683 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 TRABDQ9H4I3 376 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 STK38LQ9Y2H1 464 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 EIF4E1BA6NMX2 242 aaKnown RBP15.44■□□□□ 0.06
DDX55-209ENST00000542286 H3BRB1 525 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 NPTXRO95502 500 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 PFKMP08237 780 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 IGFBP6P24592 240 aaPredicted RBP15.44■□□□□ 0.06
DDX55-209ENST00000542286 RABGGTBP53611 331 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 RBBP5Q15291 538 aaKnown RBP15.44■□□□□ 0.06
DDX55-209ENST00000542286 SURF1Q15526 300 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 HIF1AQ16665 826 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 GOLGA7BQ2TAP0 167 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 ANKRD20A2Q5SQ80 823 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 MARCH8Q5T0T0 291 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 ZNF618Q5T7W0 954 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 ANKRD20A1Q5TYW2 823 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 ANKRD20A3Q5VUR7 823 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 CYP4V2Q6ZWL3 525 aaPredicted RBP15.44■□□□□ 0.06
DDX55-209ENST00000542286 FBXO36Q8NEA4 188 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 NDRG1Q92597 394 aaKnown RBP15.44■□□□□ 0.06
DDX55-209ENST00000542286 NKD2Q969F2 451 aaPredicted RBP15.44■□□□□ 0.06
DDX55-209ENST00000542286 KLHL29Q96CT2 875 aa15.44■□□□□ 0.06
DDX55-209ENST00000542286 TUT1Q9H6E5 874 aaKnown RBP15.44■□□□□ 0.06
DDX55-209ENST00000542286 CACNG4Q9UBN1 327 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms