RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 USP4Q13107 963 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 PAK1Q13153 545 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 ZNF77Q15935 545 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 KLHL10Q6JEL2 608 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 RALGPS2Q86X27 583 aaPredicted RBP18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 KIAA1958Q8N8K9 716 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 PDZD8Q8NEN9 1154 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 RIN3Q8TB24 985 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 ZFYVE19Q96K21 471 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 SLITRK1Q96PX8 696 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 CYP2S1Q96SQ9 504 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 SMOQ99835 787 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 MED10Q9BTT4 135 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.24■□□□□ 0.512e-6■■■■■ 68.7
SFSWAP-205ENST00000537164 KRT82Q9NSB4 513 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 ARHGAP26Q9UNA1 814 aa18.24■□□□□ 0.51
SFSWAP-205ENST00000537164 PROB1E7EW31 1015 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 AP1G2O75843 785 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 BEST1O76090 585 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 OAS1P00973 400 aaKnown RBP18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 CKMP06732 381 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 HDCP19113 662 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 YWHAQP27348 245 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 NBL1P41271 181 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 FMO5P49326 533 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 SLC5A3P53794 718 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 SLC7A9P82251 487 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 TAF10Q12962 218 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 ORC1Q13415 861 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 WDR44Q5JSH3 913 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 MAMSTRQ6ZN01 415 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 C1orf210Q8IVY1 113 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 ARL14EPQ8N8R7 260 aaPredicted RBP18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 FAM3CQ92520 227 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 CYFIP2Q96F07 1278 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 DNAI2Q9GZS0 605 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 TRPC7Q9HCX4 862 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 PNPLA8Q9NP80 782 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 GKN1Q9NS71 199 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 CISHQ9NSE2 258 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 GTSE1Q9NYZ3 720 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 CTNND2Q9UQB3 1225 aa18.23■□□□□ 0.51
SFSWAP-205ENST00000537164 SPECC1L-ADORA2AF8WAN1 911 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 P4HA2O15460 535 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 GNA14O95837 355 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 ZDHHC11BP0C7U3 371 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 CD58P19256 250 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 CTHP32929 405 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 TNK2Q07912 1038 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 CAMK4Q16566 473 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 ITPRIPL2Q3MIP1 535 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 CLEC20AQ6ZU45 233 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 TRIM59Q8IWR1 403 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 SCAMP5Q8TAC9 235 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 ATOH1Q92858 354 aaPredicted RBP18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 TATDN2Q93075 761 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 IER2Q9BTL4 223 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 HPS4Q9NQG7 708 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 FAM49BQ9NUQ9 324 aa18.22■□□□□ 0.51
SFSWAP-205ENST00000537164 MYO16Q9Y6X6 1858 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 HHLA1C9JL84 531 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 FAM200BP0CF97 657 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 TUBP50607 506 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 KPNA1P52294 538 aaPredicted RBP18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 ZXDBP98169 803 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 RUNX3Q13761 415 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 MTF1Q14872 753 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 PDGFRLQ15198 375 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 CCDC40Q4G0X9 1142 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 MAML2Q8IZL2 1156 aaPredicted RBP18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 SLC4A11Q8NBS3 891 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 PHOX2BQ99453 314 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 ARID3AQ99856 593 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 RNF38Q9H0F5 515 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 CHRDQ9H2X0 955 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 CLSTN2Q9H4D0 955 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 FBXO44Q9H4M3 255 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 RWDD2AQ9UIY3 292 aa18.21■□□□□ 0.51
SFSWAP-205ENST00000537164 CHRNB1P11230 501 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 RAD23BP54727 409 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 MAP3K7CLP57077 242 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 CUL2Q13617 745 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 PPP1R26Q5T8A7 1209 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 CC2D1AQ6P1N0 951 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 TXNDC11Q6PKC3 985 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 UBR7Q8N806 425 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 LMO3Q8TAP4 145 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 SH3RF2Q8TEC5 729 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 OSCP1Q8WVF1 389 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 FBXO32Q969P5 355 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 TMEM176AQ96HP8 235 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 FBXO4Q9UKT5 387 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 NDRG2Q9UN36 371 aaKnown RBP18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 ZNF292O60281 2723 aa18.2■□□□□ 0.5
SFSWAP-205ENST00000537164 OTOL1A6NHN0 477 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 TBXAS1P24557 533 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 ADORA2BP29275 332 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 SOX9P48436 509 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 MRE11P49959 708 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 STX17P56962 302 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms