RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ZMIZ2Q8NF64 920 aa25.45■■□□□ 1.66
CPNE1-223ENST00000475146 SCAMP5Q8TAC9 235 aa25.45■■□□□ 1.66
CPNE1-223ENST00000475146 JAKMIP2Q96AA8 810 aa25.45■■□□□ 1.66
CPNE1-223ENST00000475146 HEXIM2Q96MH2 286 aaKnown RBP25.45■■□□□ 1.66
CPNE1-223ENST00000475146 NELL2Q99435 816 aa25.45■■□□□ 1.66
CPNE1-223ENST00000475146 GTSE1Q9NYZ3 720 aa25.45■■□□□ 1.66
CPNE1-223ENST00000475146 NDRG2Q9UN36 371 aaKnown RBP25.45■■□□□ 1.66
CPNE1-223ENST00000475146 ANAPC1Q9H1A4 1944 aa25.45■■□□□ 1.66
CPNE1-223ENST00000475146 MIA3Q5JRA6 1907 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 BEST1O76090 585 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 CCDC192P0DO97 292 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 TNK2Q07912 1038 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 CETN1Q12798 172 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 CUL2Q13617 745 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 TRIM59Q8IWR1 403 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 MLKLQ8NB16 471 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 PDZD8Q8NEN9 1154 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 RIN3Q8TB24 985 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 FAM3CQ92520 227 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 OSBPL6Q9BZF3 934 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 IRF2BPLQ9H1B7 796 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 GKN1Q9NS71 199 aa25.44■■□□□ 1.66
CPNE1-223ENST00000475146 TNFRSF10BO14763 440 aa25.43■■□□□ 1.66
CPNE1-223ENST00000475146 GLULP15104 373 aa25.43■■□□□ 1.66
CPNE1-223ENST00000475146 PFKLP17858 780 aa25.43■■□□□ 1.66
CPNE1-223ENST00000475146 SOX9P48436 509 aa25.43■■□□□ 1.66
CPNE1-223ENST00000475146 YWHAEP62258 255 aaKnown RBP25.43■■□□□ 1.66
CPNE1-223ENST00000475146 MTF1Q14872 753 aa25.43■■□□□ 1.66
CPNE1-223ENST00000475146 TMEM176AQ96HP8 235 aa25.43■■□□□ 1.66
CPNE1-223ENST00000475146 NT5C1BQ96P26 610 aa25.43■■□□□ 1.66
CPNE1-223ENST00000475146 FAM124BQ9H5Z6 455 aaPredicted RBP25.43■■□□□ 1.66
CPNE1-223ENST00000475146 C8orf33Q9H7E9 229 aaPredicted RBP25.43■■□□□ 1.66
CPNE1-223ENST00000475146 CSNK1G1Q9HCP0 422 aa25.43■■□□□ 1.66
CPNE1-223ENST00000475146 DLGAP2Q9P1A6 1054 aa25.43■■□□□ 1.66
CPNE1-223ENST00000475146 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.43■■□□□ 1.66
CPNE1-223ENST00000475146 MYH10P35580 1976 aa25.43■■□□□ 1.66
CPNE1-223ENST00000475146 SHISA7A6NL88 538 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 NCAM2O15394 837 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 RAD23BP54727 409 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 MARSP56192 900 aaKnown RBP25.42■■□□□ 1.66
CPNE1-223ENST00000475146 USP4Q13107 963 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 ZNF77Q15935 545 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 PPP1R26Q5T8A7 1209 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-223ENST00000475146 CLEC20AQ6ZU45 233 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 CREBRFQ8IUR6 639 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 SLC4A11Q8NBS3 891 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 SH3RF2Q8TEC5 729 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 OVCA2Q8WZ82 227 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 ATOH1Q92858 354 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-223ENST00000475146 MSANTD3Q96H12 275 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 FAM86C1Q9NVL1 165 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 COMMD8Q9NX08 183 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 ARHGAP26Q9UNA1 814 aa25.42■■□□□ 1.66
CPNE1-223ENST00000475146 GOLGA6L22H0YM25 854 aa25.41■■□□□ 1.66
CPNE1-223ENST00000475146 PMM2O15305 246 aa25.41■■□□□ 1.66
CPNE1-223ENST00000475146 P4HA2O15460 535 aa25.41■■□□□ 1.66
CPNE1-223ENST00000475146 TBXAS1P24557 533 aaPredicted RBP25.41■■□□□ 1.66
CPNE1-223ENST00000475146 KCNH2Q12809 1159 aa25.41■■□□□ 1.66
CPNE1-223ENST00000475146 ANGPT1Q15389 498 aa25.41■■□□□ 1.66
CPNE1-223ENST00000475146 ITPRIPL2Q3MIP1 535 aa25.41■■□□□ 1.66
CPNE1-223ENST00000475146 TRIM68Q6AZZ1 485 aa25.41■■□□□ 1.66
CPNE1-223ENST00000475146 FAM83CQ9BQN1 747 aa25.41■■□□□ 1.66
CPNE1-223ENST00000475146 EBF3Q9H4W6 596 aa25.41■■□□□ 1.66
CPNE1-223ENST00000475146 GMIPQ9P107 970 aa25.41■■□□□ 1.66
CPNE1-223ENST00000475146 CHORDC1Q9UHD1 332 aaPredicted RBP25.41■■□□□ 1.66
CPNE1-223ENST00000475146 KIF26AQ9ULI4 1882 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-223ENST00000475146 SPECC1L-ADORA2AF8WAN1 911 aa25.4■■□□□ 1.66
CPNE1-223ENST00000475146 OAS1P00973 400 aaKnown RBP25.4■■□□□ 1.66
CPNE1-223ENST00000475146 AFPP02771 609 aaKnown RBP25.4■■□□□ 1.66
CPNE1-223ENST00000475146 CTHP32929 405 aa25.4■■□□□ 1.66
CPNE1-223ENST00000475146 MLLT6P55198 1093 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-223ENST00000475146 TPD52L1Q16890 204 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-223ENST00000475146 C1orf228Q6PIY5 440 aa25.4■■□□□ 1.66
CPNE1-223ENST00000475146 RALGPS2Q86X27 583 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-223ENST00000475146 CNOT6LQ96LI5 555 aaKnown RBP25.4■■□□□ 1.66
CPNE1-223ENST00000475146 FBXO44Q9H4M3 255 aa25.4■■□□□ 1.66
CPNE1-223ENST00000475146 SMPD4Q9NXE4 827 aa25.4■■□□□ 1.66
CPNE1-223ENST00000475146 IL37Q9NZH6 218 aa25.4■■□□□ 1.66
CPNE1-223ENST00000475146 F5P12259 2224 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 ARSAP15289 507 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 MAGEA9P43362 315 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 IFNAR2P48551 515 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 PDGFRLQ15198 375 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 DPCR1Q3MIW9 517 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 GPRIN1Q7Z2K8 1008 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 PPM1KQ8N3J5 372 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 DUSP16Q9BY84 665 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 RNF38Q9H0F5 515 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 HPS4Q9NQG7 708 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 SPATA6Q9NWH7 488 aaPredicted RBP25.39■■□□□ 1.66
CPNE1-223ENST00000475146 DUS2Q9NX74 493 aaKnown RBP25.39■■□□□ 1.66
CPNE1-223ENST00000475146 CPQQ9Y646 472 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 WNT6Q9Y6F9 365 aa25.39■■□□□ 1.66
CPNE1-223ENST00000475146 OLFM2O95897 454 aa25.38■■□□□ 1.65
CPNE1-223ENST00000475146 MBL2P11226 248 aaPredicted RBP25.38■■□□□ 1.65
CPNE1-223ENST00000475146 ACO1P21399 889 aaKnown RBP25.38■■□□□ 1.65
CPNE1-223ENST00000475146 SLC7A9P82251 487 aa25.38■■□□□ 1.65
CPNE1-223ENST00000475146 RUNX3Q13761 415 aa25.38■■□□□ 1.65
CPNE1-223ENST00000475146 HECTD3Q5T447 861 aa25.38■■□□□ 1.65
CPNE1-223ENST00000475146 CLDN23Q96B33 292 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms