RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RUBCNQ92622 972 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 SYT15Q9BQS2 421 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 CALN1Q9BXU9 219 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 RAB17Q9H0T7 212 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 LRRC19Q9H756 370 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.54□□□□□ -1.36
CLK1-210ENST00000473565 CALCOCO1Q9P1Z2 691 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 VPS18Q9P253 973 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ASIC3Q9UHC3 531 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 PRG3Q9Y2Y8 225 aaPredicted RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 ZNF638Q14966 1978 aaKnown RBP6.53□□□□□ -1.36
CLK1-210ENST00000473565 ARVCFO00192 962 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 GABRDO14764 452 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 NBNO60934 754 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 ZNF623O75123 536 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 RNF8O76064 485 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 DDHD2O94830 711 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 TRUB2O95900 331 aaKnown RBP6.53□□□□□ -1.36
CLK1-210ENST00000473565 HSD17B3P37058 310 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 DHX9Q08211 1270 aaKnown RBP6.53□□□□□ -1.36
CLK1-210ENST00000473565 CUL1Q13616 776 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 GPNMBQ14956 572 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 STILQ15468 1287 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 FAM26DQ5JW98 314 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 NPNTQ6UXI9 565 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 CLEC20AQ6ZU45 233 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 HFE2Q6ZVN8 426 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 GPRIN1Q7Z2K8 1008 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 ZNF598Q86UK7 904 aaKnown RBP6.53□□□□□ -1.36
CLK1-210ENST00000473565 RCOR2Q8IZ40 523 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 CCDC33Q8N5R6 958 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 C12orf50Q8NA57 414 aaPredicted RBP6.53□□□□□ -1.36
CLK1-210ENST00000473565 STKLD1Q8NE28 680 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 UHMK1Q8TAS1 419 aaKnown RBP6.53□□□□□ -1.36
CLK1-210ENST00000473565 SEC14L1Q92503 715 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 FAM149B1Q96BN6 582 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 PCED1BQ96HM7 432 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 SCLYQ96I15 445 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 RBM41Q96IZ5 413 aaKnown RBP6.53□□□□□ -1.36
CLK1-210ENST00000473565 RTP3Q9BQQ7 232 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 CNPY3Q9BT09 278 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 TMPRSS4Q9NRS4 437 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 ZDHHC18Q9NUE0 388 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 TMLHEQ9NVH6 421 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 DNAJB4Q9UDY4 337 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 ATP8A1Q9Y2Q0 1164 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 FAM187AA6NFU0 413 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 KBTBD13C9JR72 458 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 CST8O60676 142 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 OR4Q2P0C623 313 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 KDELR1P24390 212 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 SDC4P31431 198 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 PBX3P40426 434 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 FNTAP49354 379 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 GSCP56915 257 aaPredicted RBP6.53□□□□□ -1.36
CLK1-210ENST00000473565 SKIDA1Q1XH10 827 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 KCTD16Q68DU8 428 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 CCDC25Q86WR0 208 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 NETO2Q8NC67 525 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 KCTD6Q8NC69 237 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 DBF4BQ8NFT6 615 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 FNIP1Q8TF40 1166 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 UBLCP1Q8WVY7 318 aaPredicted RBP6.53□□□□□ -1.36
CLK1-210ENST00000473565 ARL8AQ96BM9 186 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 TNIP3Q96KP6 325 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 B3GALT6Q96L58 329 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 FMO2Q99518 471 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 FAM114A2Q9NRY5 505 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.53□□□□□ -1.36
CLK1-210ENST00000473565 RASAL2Q9UJF2 1139 aa6.53□□□□□ -1.36
CLK1-210ENST00000473565 C9IYK1 514 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 NRP1O14786 923 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 TP73O15350 636 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 RNF40O75150 1001 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 PECAM1P16284 738 aaPredicted RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 RAB27AP51159 221 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 CDH6P55285 790 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 CCL23P55773 120 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 HDAC4P56524 1084 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 PLCB3Q01970 1234 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 HADHQ16836 314 aaKnown RBP6.52□□□□□ -1.37
CLK1-210ENST00000473565 TFDP3Q5H9I0 405 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 CFAP58Q5T655 872 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 LRRC38Q5VT99 294 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 LRRC8DQ7L1W4 858 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 GSTA5Q7RTV2 222 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 TMC3Q7Z5M5 1100 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 SLC43A3Q8NBI5 491 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 ZMIZ2Q8NF64 920 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 OR10T2Q8NGX3 314 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 ADAM32Q8TC27 787 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 MYLPFQ96A32 169 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 SMOQ99835 787 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 DUSP16Q9BY84 665 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 PPP1R12CQ9BZL4 782 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 RNF208Q9H0X6 261 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 ASNSD1Q9NWL6 643 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 PLAAQ9Y263 795 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 LIASO43766 372 aa6.52□□□□□ -1.37
CLK1-210ENST00000473565 PRPSAP2O60256 369 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms