RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CCDC38Q502W7 563 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 VPS53Q5VIR6 699 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 ARL6IP4Q66PJ3 421 aaKnown RBP5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 RGS7BPQ6MZT1 257 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 MZT2AQ6P582 158 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 TLDC1Q6P9B6 456 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 CRTC1Q6UUV9 634 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 RNF207Q6ZRF8 634 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 KIAA0408Q6ZU52 694 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 SLC15A3Q8IY34 581 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 SMAP1Q8IYB5 467 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 FAM9BQ8IZU0 186 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 SPARTQ8N0X7 666 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 NKAPQ8N5F7 415 aaKnown RBP5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 GLIS1Q8NBF1 620 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 FAM136AQ96C01 138 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 TRIM5Q9C035 493 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 PRKRIP1Q9H875 184 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 ZBTB26Q9HCK0 441 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 AGO4Q9HCK5 861 aaKnown RBP5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 TMEM8AQ9HCN3 771 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 MORC2Q9Y6X9 1032 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 INSRP06213 1382 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 ITSN2Q9NZM3 1697 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 FGD6Q6ZV73 1430 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 CD3EAPO15446 510 aaKnown RBP5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 SRGAP2O75044 1071 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 SPDEFO95238 335 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 EGR1P18146 543 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 GATA3P23771 443 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 ATICP31939 592 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 ITGA8P53708 1063 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 GUCY1B3Q02153 619 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 KCNAB1Q14722 419 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 PFKFB4Q16877 469 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 ZACNQ401N2 412 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 SPATS1Q496A3 300 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 CERCAMQ5T4B2 595 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 MRNIPQ6NTE8 343 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 GGT6Q6P531 493 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 SPATA5Q8NB90 893 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 CCT6BQ92526 530 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 LENG9Q96B70 501 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 ZNF668Q96K58 619 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 AMBRA1Q9C0C7 1298 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 OBP2BQ9NPH6 170 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 ZMYND8Q9ULU4 1186 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 FZD1Q9UP38 647 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 SSX2IPQ9Y2D8 614 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 CC2D2AQ9P2K1 1620 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 FER1L4A9Z1Z3 1794 aa5.14□□□□□ -1.59
HMGB1P16-201ENST00000447155 PLXNC1O60486 1568 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 KDM5CP41229 1560 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 SYT5O00445 386 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 PIP5K1CO60331 668 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 COQ9O75208 318 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 CSF1RP07333 972 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 SRGNP10124 158 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 PRKAR1BP31321 381 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 PTGS2P35354 604 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 PDE6CP51160 858 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 GALNT1Q10472 559 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 PTK2BQ14289 1009 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 SPARCL1Q14515 664 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 MAPKAPK3Q16644 382 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 SLC5A9Q2M3M2 681 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 PTCHD3Q3KNS1 767 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 C4orf46Q504U0 113 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 FAXCQ5TGI0 409 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 MANEALQ5VSG8 457 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 USP49Q70CQ1 688 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 CCDC28AQ8IWP9 274 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 CACNA2D3Q8IZS8 1091 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 SYNE4Q8N205 404 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 DNAJB14Q8TBM8 379 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 IPO4Q8TEX9 1081 aaKnown RBP5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 CACTINQ8WUQ7 758 aaKnown RBP5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 LTV1Q96GA3 475 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 FAM227BQ96M60 508 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 PLEKHG4BQ96PX9 1271 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 RMDN3Q96TC7 470 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 ACTRT3Q9BYD9 372 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 TPSD1Q9BZJ3 242 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 ZCWPW1Q9H0M4 648 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 PCDHAC1Q9H158 963 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 UPF2Q9HAU5 1272 aaKnown RBP5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 AS3MTQ9HBK9 375 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 GBA2Q9HCG7 927 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 TBCCD1Q9NVR7 557 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 TMOD4Q9NZQ9 345 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 SERTAD3Q9UJW9 196 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 HPSEQ9Y251 543 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 BRD4O60885 1362 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 NINLQ9Y2I6 1382 aa5.13□□□□□ -1.59
HMGB1P16-201ENST00000447155 CLASP1Q7Z460 1538 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms