RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 C3orf20Q8ND61 904 aa22.21■■□□□ 1.15
VPS13B-204ENST00000441350 KLHL5Q96PQ7 755 aa22.21■■□□□ 1.15
VPS13B-204ENST00000441350 CERS4Q9HA82 394 aa22.21■■□□□ 1.15
VPS13B-204ENST00000441350 CHORDC1Q9UHD1 332 aaPredicted RBP22.21■■□□□ 1.15
VPS13B-204ENST00000441350 MAFFQ9ULX9 164 aa22.21■■□□□ 1.15
VPS13B-204ENST00000441350 SLC27A5Q9Y2P5 690 aa22.21■■□□□ 1.15
VPS13B-204ENST00000441350 HIDE1A8MVS5 230 aa22.2■■□□□ 1.15
VPS13B-204ENST00000441350 PIK3R2O00459 728 aa22.2■■□□□ 1.15
VPS13B-204ENST00000441350 TRIM66O15016 1216 aa22.2■■□□□ 1.15
VPS13B-204ENST00000441350 PAPSS1O43252 624 aaPredicted RBP22.2■■□□□ 1.15
VPS13B-204ENST00000441350 MTA2O94776 668 aa22.2■■□□□ 1.15
VPS13B-204ENST00000441350 HADHBP55084 474 aaKnown RBP22.2■■□□□ 1.15
VPS13B-204ENST00000441350 PLPP4Q5VZY2 271 aa22.2■■□□□ 1.15
VPS13B-204ENST00000441350 PDE12Q6L8Q7 609 aaKnown RBP22.2■■□□□ 1.15
VPS13B-204ENST00000441350 GPRIN1Q7Z2K8 1008 aa22.2■■□□□ 1.15
VPS13B-204ENST00000441350 SCN4BQ8IWT1 228 aa22.2■■□□□ 1.15
VPS13B-204ENST00000441350 SCUBE3Q8IX30 993 aa22.2■■□□□ 1.15
VPS13B-204ENST00000441350 PARVAQ9NVD7 372 aa22.2■■□□□ 1.15
VPS13B-204ENST00000441350 UVRAGQ9P2Y5 699 aa22.2■■□□□ 1.15
VPS13B-204ENST00000441350 COG5Q9UP83 839 aa22.2■■□□□ 1.15
VPS13B-204ENST00000441350 LAMA3Q16787 3333 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 MACROD2A1Z1Q3 448 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 TNFRSF10BO14763 440 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 SEC24AO95486 1093 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 IRS1P35568 1242 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 ADIGQ0VDE8 80 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 PPP1R15BQ5SWA1 713 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 FAM183BPQ6ZVS7 135 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 ZDHHC17Q8IUH5 632 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 TIFAQ96CG3 184 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 NUP85Q9BW27 656 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 EMILIN2Q9BXX0 1053 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 LRRC4Q9HBW1 653 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 OSGEPQ9NPF4 335 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 CTTNBP2NLQ9P2B4 639 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 PAXBP1Q9Y5B6 917 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 PCDHGC5Q9Y5F6 944 aa22.2■■□□□ 1.14
VPS13B-204ENST00000441350 ZNF500O60304 480 aaPredicted RBP22.19■■□□□ 1.14
VPS13B-204ENST00000441350 ADH1AP07327 375 aa22.19■■□□□ 1.14
VPS13B-204ENST00000441350 LCP1P13796 627 aa22.19■■□□□ 1.14
VPS13B-204ENST00000441350 CA8P35219 290 aa22.19■■□□□ 1.14
VPS13B-204ENST00000441350 GPR15P49685 360 aa22.19■■□□□ 1.14
VPS13B-204ENST00000441350 TKTL1P51854 596 aa22.19■■□□□ 1.14
VPS13B-204ENST00000441350 DDR2Q16832 855 aa22.19■■□□□ 1.14
VPS13B-204ENST00000441350 MGAT5BQ3V5L5 792 aa22.19■■□□□ 1.14
VPS13B-204ENST00000441350 LILRA6Q6PI73 481 aa22.19■■□□□ 1.14
VPS13B-204ENST00000441350 OLFML1Q6UWY5 402 aa22.19■■□□□ 1.14
VPS13B-204ENST00000441350 ARNTL2Q8WYA1 636 aa22.19■■□□□ 1.14
VPS13B-204ENST00000441350 IRX2Q9BZI1 471 aaPredicted RBP22.19■■□□□ 1.14
VPS13B-204ENST00000441350 MRPL47Q9HD33 250 aaKnown RBP22.19■■□□□ 1.14
VPS13B-204ENST00000441350 SCINQ9Y6U3 715 aa22.19■■□□□ 1.14
VPS13B-204ENST00000441350 SIGLEC16A6NMB1 481 aa22.18■■□□□ 1.14
VPS13B-204ENST00000441350 BUB1O43683 1085 aa22.18■■□□□ 1.14
VPS13B-204ENST00000441350 SCNN1AP37088 669 aa22.18■■□□□ 1.14
VPS13B-204ENST00000441350 TUFMP49411 452 aaKnown RBP22.18■■□□□ 1.14
VPS13B-204ENST00000441350 RPL10AP62906 217 aaKnown RBP22.18■■□□□ 1.14
VPS13B-204ENST00000441350 OR6B2Q6IFH4 312 aa22.18■■□□□ 1.14
VPS13B-204ENST00000441350 DNAJC24Q6P3W2 148 aa22.18■■□□□ 1.14
VPS13B-204ENST00000441350 NYAP1Q6ZVC0 841 aa22.18■■□□□ 1.14
VPS13B-204ENST00000441350 TCEAL8Q8IYN2 117 aa22.18■■□□□ 1.14
VPS13B-204ENST00000441350 MICAL1Q8TDZ2 1067 aa22.18■■□□□ 1.14
VPS13B-204ENST00000441350 SPATA17Q96L03 361 aa22.18■■□□□ 1.14
VPS13B-204ENST00000441350 SEPT5Q99719 369 aaPredicted RBP22.18■■□□□ 1.14
VPS13B-204ENST00000441350 LMAN2LQ9H0V9 348 aa22.18■■□□□ 1.14
VPS13B-204ENST00000441350 USP3Q9Y6I4 520 aa22.18■■□□□ 1.14
VPS13B-204ENST00000441350 EPOPA6NHQ4 379 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 GOLGA8SH3BPF8 625 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 TGM5O43548 720 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 SOAT2O75908 522 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 MOCS3O95396 460 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 NOP2P46087 812 aaKnown RBP22.17■■□□□ 1.14
VPS13B-204ENST00000441350 SLC6A3Q01959 620 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 SIX6OS1Q8N1H7 587 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 SCML4Q8N228 414 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 ZNF564Q8TBZ8 553 aaPredicted RBP22.17■■□□□ 1.14
VPS13B-204ENST00000441350 CLEC4CQ8WTT0 213 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 PIWIL1Q96J94 861 aaKnown RBP22.17■■□□□ 1.14
VPS13B-204ENST00000441350 CALR3Q96L12 384 aaKnown RBP22.17■■□□□ 1.14
VPS13B-204ENST00000441350 CEP295NLQ96MC4 621 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 CNGB3Q9NQW8 809 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 TRANK1O15050 2925 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 A0A1W2PPC1 479 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 FBXO21O94952 628 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 CSPG5O95196 566 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 GJB6O95452 261 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 SDHAF4Q5VUM1 108 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 PM20D1Q6GTS8 502 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 NUP93Q8N1F7 819 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 TPCN2Q8NHX9 752 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 FEZF2Q8TBJ5 459 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 KHSRPQ92945 711 aaKnown RBP eCLIP22.17■■□□□ 1.141e-6■■■□□ 16.7
VPS13B-204ENST00000441350 ULBP1Q9BZM6 244 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 CYP4F11Q9HBI6 524 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 IL37Q9NZH6 218 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 CAPN6Q9Y6Q1 641 aa22.17■■□□□ 1.14
VPS13B-204ENST00000441350 PLXNA3P51805 1871 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 TMEM191CA6NGB0 347 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 KIF5CO60282 957 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 LPXNO60711 386 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 C1RP00736 705 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms