RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 RSPO4Q2I0M5 234 aaPredicted RBP12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 ATAT1Q5SQI0 421 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 WSCD1Q658N2 575 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 ARHGAP17Q68EM7 881 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 KCNT2Q6UVM3 1135 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 LCLAT1Q6UWP7 414 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 TMC5Q6UXY8 1006 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 RHOT2Q8IXI1 618 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 MRPL43Q8N983 215 aaKnown RBP12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 ATRIPQ8WXE1 791 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 AUTS2Q8WXX7 1259 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 RFFLQ8WZ73 363 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 RTP3Q9BQQ7 232 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 ZSWIM1Q9BR11 485 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 COLEC11Q9BWP8 271 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 PACSIN1Q9BY11 444 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 DLL3Q9NYJ7 618 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 TAS2R14Q9NYV8 317 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 CACNG4Q9UBN1 327 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 GTF3C4Q9UKN8 822 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 NME7Q9Y5B8 376 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 CACNA1BQ00975 2339 aa12.4□□□□□ -0.42
AC009404.1-202ENST00000439955 SYN3O14994 580 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 CALCAP01258 141 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 ALDH2P05091 517 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 CFHP08603 1231 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 SETSIPP0DME0 302 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 EPCAMP16422 314 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 OR1G1P47890 313 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 GPC5P78333 572 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 KRT17Q04695 432 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 TDGQ13569 410 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 SMC1AQ14683 1233 aaKnown RBP12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 NAA35Q5VZE5 725 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 KIAA1841Q6NSI8 718 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 MON1BQ7L1V2 547 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 ACOT1Q86TX2 421 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 OSTM1Q86WC4 334 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 MCOLN2Q8IZK6 566 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 B3GALNT2Q8NCR0 500 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 MSANTD4Q8NCY6 345 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 TRIM58Q8NG06 486 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 UBE2Q2Q8WVN8 375 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 CYFIP2Q96F07 1278 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 ZNF558Q96NG5 402 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 NOX5Q96PH1 765 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 ALS2CR12Q96Q35 445 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 RRAGDQ9NQL2 400 aaPredicted RBP12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 DDX43Q9NXZ2 648 aaKnown RBP12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 DNAJB4Q9UDY4 337 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 TRIM10Q9UDY6 481 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 CDH9Q9ULB4 789 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 GUCA1BQ9UMX6 200 aa12.39□□□□□ -0.43
AC009404.1-202ENST00000439955 TMCO5BA8MYB1 307 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 NT5C1B-RDH14C9J2C7 533 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 NRP1O14786 923 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 MTA2O94776 668 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 MICAL2O94851 1124 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 ABL1P00519 1130 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 CYP1A2P05177 515 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 CALB1P05937 261 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 MMP8P22894 467 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 IGFBP6P24592 240 aaPredicted RBP12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 LMO2P25791 158 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 GSCP56915 257 aaPredicted RBP12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 GNG11P61952 73 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 STK32AQ8WU08 396 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 RSAD2Q8WXG1 361 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 RUBCNQ92622 972 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 HNRNPABQ99729 332 aaKnown RBP12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 ACBD6Q9BR61 282 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 MIS12Q9H081 205 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 THAP2Q9H0W7 228 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 SEMA4AQ9H3S1 761 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 SPG21Q9NZD8 308 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 UVRAGQ9P2Y5 699 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 HESX1Q9UBX0 185 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 ADAM28Q9UKQ2 775 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 TSPAN16Q9UKR8 245 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 STRIP2Q9ULQ0 834 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 CA14Q9ULX7 337 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 TFR2Q9UP52 801 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 FAN1Q9Y2M0 1017 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 DUSP10Q9Y6W6 482 aa12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 EP300Q09472 2414 aaPredicted RBP12.38□□□□□ -0.43
AC009404.1-202ENST00000439955 SF3B1O75533 1304 aaKnown RBP eCLIP12.37□□□□□ -0.43
AC009404.1-202ENST00000439955 MACROD2A1Z1Q3 448 aa12.37□□□□□ -0.43
AC009404.1-202ENST00000439955 KRBA1A5PL33 1030 aa12.37□□□□□ -0.43
AC009404.1-202ENST00000439955 M0QYV0 167 aa12.37□□□□□ -0.43
AC009404.1-202ENST00000439955 CXCL14O95715 111 aa12.37□□□□□ -0.43
AC009404.1-202ENST00000439955 DCNP07585 359 aaKnown RBP12.37□□□□□ -0.43
AC009404.1-202ENST00000439955 GALTP07902 379 aa12.37□□□□□ -0.43
AC009404.1-202ENST00000439955 PTPN1P18031 435 aaKnown RBP12.37□□□□□ -0.43
AC009404.1-202ENST00000439955 ABCB4P21439 1286 aa12.37□□□□□ -0.43
AC009404.1-202ENST00000439955 GPD2P43304 727 aa12.37□□□□□ -0.43
AC009404.1-202ENST00000439955 BRCC3P46736 316 aa12.37□□□□□ -0.43
AC009404.1-202ENST00000439955 SLC11A1P49279 550 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms